RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 CCDC81Q6ZN84 652 aa11.84□□□□□ -0.51
SYNE2-214ENST00000554928 RNF44Q7L0R7 432 aa11.84□□□□□ -0.51
SYNE2-214ENST00000554928 BPHLQ86WA6 291 aaPredicted RBP11.84□□□□□ -0.51
SYNE2-214ENST00000554928 ESX1Q8N693 406 aa11.84□□□□□ -0.51
SYNE2-214ENST00000554928 OR8K5Q8NH50 307 aa11.84□□□□□ -0.51
SYNE2-214ENST00000554928 OR56A3Q8NH54 315 aa11.84□□□□□ -0.51
SYNE2-214ENST00000554928 DCAKDQ8WVC6 231 aa11.84□□□□□ -0.51
SYNE2-214ENST00000554928 KCTD4Q8WVF5 259 aa11.84□□□□□ -0.51
SYNE2-214ENST00000554928 FBXL8Q96CD0 374 aa11.84□□□□□ -0.51
SYNE2-214ENST00000554928 TSPAN17Q96FV3 270 aa11.84□□□□□ -0.51
SYNE2-214ENST00000554928 UBXN10Q96LJ8 280 aa11.84□□□□□ -0.51
SYNE2-214ENST00000554928 ZNF285Q96NJ3 590 aa11.84□□□□□ -0.51
SYNE2-214ENST00000554928 PRAP1Q96NZ9 151 aa11.84□□□□□ -0.51
SYNE2-214ENST00000554928 PAFAH2Q99487 392 aa11.84□□□□□ -0.51
SYNE2-214ENST00000554928 CHST8Q9H2A9 424 aa11.84□□□□□ -0.51
SYNE2-214ENST00000554928 ACTR5Q9H9F9 607 aaPredicted RBP11.84□□□□□ -0.51
SYNE2-214ENST00000554928 FANCEQ9HB96 536 aa11.84□□□□□ -0.51
SYNE2-214ENST00000554928 CCDC177Q9NQR7 707 aaPredicted RBP11.84□□□□□ -0.51
SYNE2-214ENST00000554928 SNX15Q9NRS6 342 aa11.84□□□□□ -0.51
SYNE2-214ENST00000554928 DHCR7Q9UBM7 475 aaKnown RBP11.84□□□□□ -0.51
SYNE2-214ENST00000554928 CTNNAL1Q9UBT7 734 aa11.84□□□□□ -0.51
SYNE2-214ENST00000554928 PCDHB3Q9Y5E6 796 aa11.84□□□□□ -0.51
SYNE2-214ENST00000554928 MGAQ8IWI9 3026 aa11.84□□□□□ -0.51
SYNE2-214ENST00000554928 NCF1BA6NI72 391 aaPredicted RBP11.83□□□□□ -0.52
SYNE2-214ENST00000554928 NCF1CA8MVU1 366 aaPredicted RBP11.83□□□□□ -0.52
SYNE2-214ENST00000554928 TARM1B6A8C7 271 aa11.83□□□□□ -0.52
SYNE2-214ENST00000554928 MEN1O00255 615 aa11.83□□□□□ -0.52
SYNE2-214ENST00000554928 NKX2-8O15522 239 aa11.83□□□□□ -0.52
SYNE2-214ENST00000554928 TAPBPO15533 448 aa11.83□□□□□ -0.52
SYNE2-214ENST00000554928 P2RX6O15547 441 aa11.83□□□□□ -0.52
SYNE2-214ENST00000554928 C2P06681 752 aa11.83□□□□□ -0.52
SYNE2-214ENST00000554928 CAPN1P07384 714 aa11.83□□□□□ -0.52
SYNE2-214ENST00000554928 ENO2P09104 434 aaPredicted RBP11.83□□□□□ -0.52
SYNE2-214ENST00000554928 CDH1P12830 882 aa11.83□□□□□ -0.52
SYNE2-214ENST00000554928 NCF1P14598 390 aaPredicted RBP11.83□□□□□ -0.52
SYNE2-214ENST00000554928 NPPBP16860 134 aa11.83□□□□□ -0.52
SYNE2-214ENST00000554928 DLSTP36957 453 aa11.83□□□□□ -0.52
SYNE2-214ENST00000554928 GDF5P43026 501 aa11.83□□□□□ -0.52
SYNE2-214ENST00000554928 TMPRSS3P57727 454 aa11.83□□□□□ -0.52
SYNE2-214ENST00000554928 VSNL1P62760 191 aa11.83□□□□□ -0.52
SYNE2-214ENST00000554928 VAC14Q08AM6 782 aa11.83□□□□□ -0.52
SYNE2-214ENST00000554928 CEP128Q6ZU80 1094 aa11.83□□□□□ -0.52
SYNE2-214ENST00000554928 RAPH1Q70E73 1250 aa11.83□□□□□ -0.52
SYNE2-214ENST00000554928 DSELQ8IZU8 1212 aa11.83□□□□□ -0.52
SYNE2-214ENST00000554928 CENPLQ8N0S6 344 aaPredicted RBP11.83□□□□□ -0.52
SYNE2-214ENST00000554928 SHISA5Q8N114 240 aa11.83□□□□□ -0.52
SYNE2-214ENST00000554928 METTL27Q8N6F8 245 aaPredicted RBP11.83□□□□□ -0.52
SYNE2-214ENST00000554928 N4BP2L2Q92802 583 aaPredicted RBP11.83□□□□□ -0.52
SYNE2-214ENST00000554928 EXT2Q93063 718 aa11.83□□□□□ -0.52
SYNE2-214ENST00000554928 MR1Q95460 341 aa11.83□□□□□ -0.52
SYNE2-214ENST00000554928 ZUFSPQ96AP4 578 aa11.83□□□□□ -0.52
SYNE2-214ENST00000554928 ESAMQ96AP7 390 aa11.83□□□□□ -0.52
SYNE2-214ENST00000554928 NXNL1Q96CM4 212 aa11.83□□□□□ -0.52
SYNE2-214ENST00000554928 CLIP3Q96DZ5 547 aa11.83□□□□□ -0.52
SYNE2-214ENST00000554928 SELENOSQ9BQE4 189 aa11.83□□□□□ -0.52
SYNE2-214ENST00000554928 TMEM79Q9BSE2 394 aa11.83□□□□□ -0.52
SYNE2-214ENST00000554928 TSPYL1Q9H0U9 437 aa11.83□□□□□ -0.52
SYNE2-214ENST00000554928 SPNS1Q9H2V7 528 aa11.83□□□□□ -0.52
SYNE2-214ENST00000554928 GPN2Q9H9Y4 310 aaPredicted RBP11.83□□□□□ -0.52
SYNE2-214ENST00000554928 ZNF358Q9NW07 568 aa11.83□□□□□ -0.52
SYNE2-214ENST00000554928 SERTAD3Q9UJW9 196 aa11.83□□□□□ -0.52
SYNE2-214ENST00000554928 PADI1Q9ULC6 663 aa11.83□□□□□ -0.52
SYNE2-214ENST00000554928 NOVA2Q9UNW9 492 aaKnown RBP11.83□□□□□ -0.52
SYNE2-214ENST00000554928 OARD1Q9Y530 152 aa11.83□□□□□ -0.52
SYNE2-214ENST00000554928 ASB1Q9Y576 335 aa11.83□□□□□ -0.52
SYNE2-214ENST00000554928 ZFYVE26Q68DK2 2539 aa11.83□□□□□ -0.52
SYNE2-214ENST00000554928 NBEAQ8NFP9 2946 aa11.83□□□□□ -0.52
SYNE2-214ENST00000554928 A0A087WUV0 522 aaPredicted RBP11.82□□□□□ -0.52
SYNE2-214ENST00000554928 FEZF1A0PJY2 475 aa11.82□□□□□ -0.52
SYNE2-214ENST00000554928 ZNF839A8K0R7 811 aa11.82□□□□□ -0.52
SYNE2-214ENST00000554928 H0YGG7 62 aa11.82□□□□□ -0.52
SYNE2-214ENST00000554928 ZSCAN9O15535 394 aaPredicted RBP11.82□□□□□ -0.52
SYNE2-214ENST00000554928 MAP3K7O43318 606 aa11.82□□□□□ -0.52
SYNE2-214ENST00000554928 CNOT3O75175 753 aaKnown RBP11.82□□□□□ -0.52
SYNE2-214ENST00000554928 FKBP9O95302 570 aa11.82□□□□□ -0.52
SYNE2-214ENST00000554928 ABHD2P08910 425 aa11.82□□□□□ -0.52
SYNE2-214ENST00000554928 FURINP09958 794 aa11.82□□□□□ -0.52
SYNE2-214ENST00000554928 HIST1H2AGP0C0S8 130 aaPredicted RBP11.82□□□□□ -0.52
SYNE2-214ENST00000554928 TCN2P20062 427 aa11.82□□□□□ -0.52
SYNE2-214ENST00000554928 HIST1H2ADP20671 130 aa11.82□□□□□ -0.52
SYNE2-214ENST00000554928 DEKP35659 375 aaKnown RBP11.82□□□□□ -0.52
SYNE2-214ENST00000554928 AP1S2P56377 157 aa11.82□□□□□ -0.52
SYNE2-214ENST00000554928 ARF3P61204 181 aaPredicted RBP11.82□□□□□ -0.52
SYNE2-214ENST00000554928 CSNK1G2P78368 415 aa11.82□□□□□ -0.52
SYNE2-214ENST00000554928 MEF2AQ02078 507 aaPredicted RBP11.82□□□□□ -0.52
SYNE2-214ENST00000554928 DNASE1L3Q13609 305 aa11.82□□□□□ -0.52
SYNE2-214ENST00000554928 SLC9A5Q14940 896 aa11.82□□□□□ -0.52
SYNE2-214ENST00000554928 TGFBIQ15582 683 aa11.82□□□□□ -0.52
SYNE2-214ENST00000554928 WASHC2DQ5SRD0 308 aa11.82□□□□□ -0.52
SYNE2-214ENST00000554928 CATSPEREQ5SY80 951 aa11.82□□□□□ -0.52
SYNE2-214ENST00000554928 CYB5D1Q6P9G0 228 aa11.82□□□□□ -0.52
SYNE2-214ENST00000554928 PCSK4Q6UW60 755 aa11.82□□□□□ -0.52
SYNE2-214ENST00000554928 FAM198BQ6UWH4 519 aa11.82□□□□□ -0.52
SYNE2-214ENST00000554928 ZNF517Q6ZMY9 492 aaPredicted RBP11.82□□□□□ -0.52
SYNE2-214ENST00000554928 TRMT10CQ7L0Y3 403 aaKnown RBP11.82□□□□□ -0.52
SYNE2-214ENST00000554928 ADCK2Q7Z695 626 aa11.82□□□□□ -0.52
SYNE2-214ENST00000554928 ISCA2Q86U28 154 aa11.82□□□□□ -0.52
SYNE2-214ENST00000554928 PLD6Q8N2A8 252 aaKnown RBP11.82□□□□□ -0.52
SYNE2-214ENST00000554928 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.82□□□□□ -0.52
SYNE2-214ENST00000554928 ANKRD7Q92527 254 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms