RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 SLC16A8O95907 504 aa11.35□□□□□ -0.59
TRAPPC6B-204ENST00000554018 SYF2O95926 243 aaKnown RBP11.35□□□□□ -0.59
TRAPPC6B-204ENST00000554018 HSD17B2P37059 387 aa11.35□□□□□ -0.59
TRAPPC6B-204ENST00000554018 ARHGAP19Q14CB8 494 aa11.35□□□□□ -0.59
TRAPPC6B-204ENST00000554018 PLEKHN1Q494U1 663 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC6B-204ENST00000554018 KIRREL2Q6UWL6 708 aa11.35□□□□□ -0.59
TRAPPC6B-204ENST00000554018 CYHR1Q6ZMK1 362 aa11.35□□□□□ -0.59
TRAPPC6B-204ENST00000554018 PIWIL4Q7Z3Z4 852 aaKnown RBP11.35□□□□□ -0.59
TRAPPC6B-204ENST00000554018 PAQR7Q86WK9 346 aa11.35□□□□□ -0.59
TRAPPC6B-204ENST00000554018 CPNE9Q8IYJ1 553 aa11.35□□□□□ -0.59
TRAPPC6B-204ENST00000554018 PRSS58Q8IYP2 241 aa11.35□□□□□ -0.59
TRAPPC6B-204ENST00000554018 FAM26EQ8N5C1 309 aa11.35□□□□□ -0.59
TRAPPC6B-204ENST00000554018 ZNF480Q8WV37 535 aa11.35□□□□□ -0.59
TRAPPC6B-204ENST00000554018 COL26A1Q96A83 441 aa11.35□□□□□ -0.59
TRAPPC6B-204ENST00000554018 ZFYVE21Q9BQ24 234 aa11.35□□□□□ -0.59
TRAPPC6B-204ENST00000554018 PLCD4Q9BRC7 762 aa11.35□□□□□ -0.59
TRAPPC6B-204ENST00000554018 MESP1Q9BRJ9 268 aa11.35□□□□□ -0.59
TRAPPC6B-204ENST00000554018 DDX47Q9H0S4 455 aaKnown RBP11.35□□□□□ -0.59
TRAPPC6B-204ENST00000554018 KCNF1Q9H3M0 494 aa11.35□□□□□ -0.59
TRAPPC6B-204ENST00000554018 ZNF552Q9H707 407 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC6B-204ENST00000554018 GRPEL1Q9HAV7 217 aa11.35□□□□□ -0.59
TRAPPC6B-204ENST00000554018 ZBTB20Q9HC78 741 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC6B-204ENST00000554018 ZNF304Q9HCX3 659 aa11.35□□□□□ -0.59
TRAPPC6B-204ENST00000554018 IARS2Q9NSE4 1012 aaKnown RBP11.35□□□□□ -0.59
TRAPPC6B-204ENST00000554018 ABCF3Q9NUQ8 709 aa11.35□□□□□ -0.59
TRAPPC6B-204ENST00000554018 KLHL42Q9P2K6 505 aa11.35□□□□□ -0.59
TRAPPC6B-204ENST00000554018 TAC3Q9UHF0 121 aa11.35□□□□□ -0.59
TRAPPC6B-204ENST00000554018 VPS4AQ9UN37 437 aa11.35□□□□□ -0.59
TRAPPC6B-204ENST00000554018 DHRS7Q9Y394 339 aa11.35□□□□□ -0.59
TRAPPC6B-204ENST00000554018 HS3ST3B1Q9Y662 390 aa11.35□□□□□ -0.59
TRAPPC6B-204ENST00000554018 VSTM2BA6NLU5 285 aa11.34□□□□□ -0.59
TRAPPC6B-204ENST00000554018 E7ENX8 843 aa11.34□□□□□ -0.59
TRAPPC6B-204ENST00000554018 GFYI3L273 518 aa11.34□□□□□ -0.59
TRAPPC6B-204ENST00000554018 SOCS6O14544 535 aa11.34□□□□□ -0.59
TRAPPC6B-204ENST00000554018 BANF1O75531 89 aa11.34□□□□□ -0.59
TRAPPC6B-204ENST00000554018 ALPPP05187 535 aa11.34□□□□□ -0.59
TRAPPC6B-204ENST00000554018 MPC1LP0DKB6 136 aa11.34□□□□□ -0.59
TRAPPC6B-204ENST00000554018 ERVK-10P10266 1014 aa11.34□□□□□ -0.59
TRAPPC6B-204ENST00000554018 ITGA3P26006 1051 aa11.34□□□□□ -0.59
TRAPPC6B-204ENST00000554018 SOX8P57073 446 aa11.34□□□□□ -0.59
TRAPPC6B-204ENST00000554018 TIAL1Q01085 375 aaKnown RBP eCLIP11.34□□□□□ -0.59
TRAPPC6B-204ENST00000554018 TAP2Q03519 686 aa11.34□□□□□ -0.59
TRAPPC6B-204ENST00000554018 PRDX1Q06830 199 aaKnown RBP11.34□□□□□ -0.59
TRAPPC6B-204ENST00000554018 NAA25Q14CX7 972 aa11.34□□□□□ -0.59
TRAPPC6B-204ENST00000554018 PRTGQ2VWP7 1150 aa11.34□□□□□ -0.59
TRAPPC6B-204ENST00000554018 MSS51Q4VC12 460 aa11.34□□□□□ -0.59
TRAPPC6B-204ENST00000554018 ICE2Q659A1 982 aa11.34□□□□□ -0.59
TRAPPC6B-204ENST00000554018 LMNTD2Q8IXW0 634 aa11.34□□□□□ -0.59
TRAPPC6B-204ENST00000554018 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.34□□□□□ -0.59
TRAPPC6B-204ENST00000554018 FBXO15Q8NCQ5 510 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC6B-204ENST00000554018 CD200R1Q8TD46 325 aa11.34□□□□□ -0.59
TRAPPC6B-204ENST00000554018 CALML6Q8TD86 181 aa11.34□□□□□ -0.59
TRAPPC6B-204ENST00000554018 KCNJ9Q92806 393 aa11.34□□□□□ -0.59
TRAPPC6B-204ENST00000554018 C19orf60Q96EN9 201 aa11.34□□□□□ -0.59
TRAPPC6B-204ENST00000554018 CABS1Q96KC9 395 aa11.34□□□□□ -0.59
TRAPPC6B-204ENST00000554018 C10orf90Q96M02 699 aa11.34□□□□□ -0.59
TRAPPC6B-204ENST00000554018 AARSD1Q9BTE6 412 aaKnown RBP11.34□□□□□ -0.59
TRAPPC6B-204ENST00000554018 MAP10Q9P2G4 905 aa11.34□□□□□ -0.59
TRAPPC6B-204ENST00000554018 ASIC3Q9UHC3 531 aa11.34□□□□□ -0.59
TRAPPC6B-204ENST00000554018 NXT1Q9UKK6 140 aaKnown RBP11.34□□□□□ -0.59
TRAPPC6B-204ENST00000554018 COMMD10Q9Y6G5 202 aa11.34□□□□□ -0.59
TRAPPC6B-204ENST00000554018 ZNF839A8K0R7 811 aa11.33□□□□□ -0.6
TRAPPC6B-204ENST00000554018 SMAPO00193 183 aa11.33□□□□□ -0.6
TRAPPC6B-204ENST00000554018 CES2O00748 559 aa11.33□□□□□ -0.6
TRAPPC6B-204ENST00000554018 FFAR3O14843 346 aa11.33□□□□□ -0.6
TRAPPC6B-204ENST00000554018 GPR42O15529 346 aa11.33□□□□□ -0.6
TRAPPC6B-204ENST00000554018 ZBTB14O43829 449 aa11.33□□□□□ -0.6
TRAPPC6B-204ENST00000554018 CCNDBP1O95273 360 aa11.33□□□□□ -0.6
TRAPPC6B-204ENST00000554018 ZGLP1P0C6A0 271 aa11.33□□□□□ -0.6
TRAPPC6B-204ENST00000554018 ENO3P13929 434 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC6B-204ENST00000554018 PGAM1P18669 254 aa11.33□□□□□ -0.6
TRAPPC6B-204ENST00000554018 FBLP22087 321 aaKnown RBP11.33□□□□□ -0.6
TRAPPC6B-204ENST00000554018 GABRB3P28472 473 aa11.33□□□□□ -0.6
TRAPPC6B-204ENST00000554018 KLC1Q07866 573 aa11.33□□□□□ -0.6
TRAPPC6B-204ENST00000554018 DHX9Q08211 1270 aaKnown RBP11.33□□□□□ -0.6
TRAPPC6B-204ENST00000554018 AIMP2Q13155 320 aaKnown RBP11.33□□□□□ -0.6
TRAPPC6B-204ENST00000554018 PTK6Q13882 451 aa11.33□□□□□ -0.6
TRAPPC6B-204ENST00000554018 CRYMQ14894 314 aa11.33□□□□□ -0.6
TRAPPC6B-204ENST00000554018 RBBP7Q16576 425 aa11.33□□□□□ -0.6
TRAPPC6B-204ENST00000554018 MUM1Q2TAK8 710 aa11.33□□□□□ -0.6
TRAPPC6B-204ENST00000554018 HKDC1Q2TB90 917 aa11.33□□□□□ -0.6
TRAPPC6B-204ENST00000554018 PRAMEF13Q5VWM6 474 aa11.33□□□□□ -0.6
TRAPPC6B-204ENST00000554018 ZNF425Q6IV72 752 aa11.33□□□□□ -0.6
TRAPPC6B-204ENST00000554018 PRMT9Q6P2P2 845 aa11.33□□□□□ -0.6
TRAPPC6B-204ENST00000554018 IGFL3Q6UXB1 125 aa11.33□□□□□ -0.6
TRAPPC6B-204ENST00000554018 UBE2R2Q712K3 238 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC6B-204ENST00000554018 LAPTM4BQ86VI4 370 aa11.33□□□□□ -0.6
TRAPPC6B-204ENST00000554018 KCNMB4Q86W47 210 aa11.33□□□□□ -0.6
TRAPPC6B-204ENST00000554018 PLD3Q8IV08 490 aa11.33□□□□□ -0.6
TRAPPC6B-204ENST00000554018 IGDCC3Q8IVU1 814 aa11.33□□□□□ -0.6
TRAPPC6B-204ENST00000554018 PARP9Q8IXQ6 854 aa11.33□□□□□ -0.6
TRAPPC6B-204ENST00000554018 LRRC56Q8IYG6 542 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC6B-204ENST00000554018 CSNK1A1LQ8N752 337 aa11.33□□□□□ -0.6
TRAPPC6B-204ENST00000554018 STT3BQ8TCJ2 826 aa11.33□□□□□ -0.6
TRAPPC6B-204ENST00000554018 NACC2Q96BF6 587 aa11.33□□□□□ -0.6
TRAPPC6B-204ENST00000554018 MIEF2Q96C03 454 aa11.33□□□□□ -0.6
TRAPPC6B-204ENST00000554018 OR2A5Q96R48 311 aa11.33□□□□□ -0.6
TRAPPC6B-204ENST00000554018 NDNQ99608 321 aa11.33□□□□□ -0.6
TRAPPC6B-204ENST00000554018 FAM167BQ9BTA0 163 aa11.33□□□□□ -0.6
TRAPPC6B-204ENST00000554018 CRB3Q9BUF7 120 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms