RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 TXLNGQ9NUQ3 528 aa6.97□□□□□ -1.29
ATXN3-219ENST00000553488 UVRAGQ9P2Y5 699 aa6.97□□□□□ -1.29
ATXN3-219ENST00000553488 CTSFQ9UBX1 484 aa6.97□□□□□ -1.29
ATXN3-219ENST00000553488 CDC23Q9UJX2 597 aa6.97□□□□□ -1.29
ATXN3-219ENST00000553488 PKP3Q9Y446 797 aa6.97□□□□□ -1.29
ATXN3-219ENST00000553488 ABCA4P78363 2273 aa6.97□□□□□ -1.29
ATXN3-219ENST00000553488 TRBV5-4A0A0C4DH59 114 aa6.96□□□□□ -1.3
ATXN3-219ENST00000553488 A0A1B0GX78 115 aa6.96□□□□□ -1.3
ATXN3-219ENST00000553488 VSTM2BA6NLU5 285 aa6.96□□□□□ -1.3
ATXN3-219ENST00000553488 C19orf84I3L1E1 186 aa6.96□□□□□ -1.3
ATXN3-219ENST00000553488 STX7O15400 261 aaKnown RBP6.96□□□□□ -1.3
ATXN3-219ENST00000553488 KCNN4O15554 427 aa6.96□□□□□ -1.3
ATXN3-219ENST00000553488 SERPING1P05155 500 aa6.96□□□□□ -1.3
ATXN3-219ENST00000553488 CHRM5P08912 532 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-219ENST00000553488 SHMT2P34897 504 aa6.96□□□□□ -1.3
ATXN3-219ENST00000553488 PBX1P40424 430 aa6.96□□□□□ -1.3
ATXN3-219ENST00000553488 CA7P43166 264 aa6.96□□□□□ -1.3
ATXN3-219ENST00000553488 TNFSF10P50591 281 aa6.96□□□□□ -1.3
ATXN3-219ENST00000553488 ZNF140P52738 457 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-219ENST00000553488 DYNLT1P63172 113 aa6.96□□□□□ -1.3
ATXN3-219ENST00000553488 ADORA2A-AS1P86434 159 aa6.96□□□□□ -1.3
ATXN3-219ENST00000553488 RPA4Q13156 261 aa6.96□□□□□ -1.3
ATXN3-219ENST00000553488 PRKG2Q13237 762 aa6.96□□□□□ -1.3
ATXN3-219ENST00000553488 MPP3Q13368 585 aa6.96□□□□□ -1.3
ATXN3-219ENST00000553488 KRT33BQ14525 404 aa6.96□□□□□ -1.3
ATXN3-219ENST00000553488 CDSNQ15517 529 aa6.96□□□□□ -1.3
ATXN3-219ENST00000553488 TAZQ16635 292 aa6.96□□□□□ -1.3
ATXN3-219ENST00000553488 SLC5A12Q1EHB4 618 aa6.96□□□□□ -1.3
ATXN3-219ENST00000553488 ISLR2Q6UXK2 745 aa6.96□□□□□ -1.3
ATXN3-219ENST00000553488 RPTNQ6XPR3 784 aa6.96□□□□□ -1.3
ATXN3-219ENST00000553488 UNC5AQ6ZN44 842 aa6.96□□□□□ -1.3
ATXN3-219ENST00000553488 LINC00696Q6ZRV3 163 aa6.96□□□□□ -1.3
ATXN3-219ENST00000553488 CLEC17AQ6ZS10 378 aa6.96□□□□□ -1.3
ATXN3-219ENST00000553488 OVCH1Q7RTY7 1134 aa6.96□□□□□ -1.3
ATXN3-219ENST00000553488 ZNF567Q8N184 647 aa6.96□□□□□ -1.3
ATXN3-219ENST00000553488 ACBD4Q8NC06 268 aa6.96□□□□□ -1.3
ATXN3-219ENST00000553488 IPMKQ8NFU5 416 aa6.96□□□□□ -1.3
ATXN3-219ENST00000553488 OR4K2Q8NGD2 314 aa6.96□□□□□ -1.3
ATXN3-219ENST00000553488 OR5AR1Q8NGP9 310 aa6.96□□□□□ -1.3
ATXN3-219ENST00000553488 OR13C4Q8NGS5 318 aa6.96□□□□□ -1.3
ATXN3-219ENST00000553488 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-219ENST00000553488 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-219ENST00000553488 PSMF1Q92530 271 aa6.96□□□□□ -1.3
ATXN3-219ENST00000553488 N4BP2L2Q92802 583 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-219ENST00000553488 THOC3Q96J01 351 aaKnown RBP6.96□□□□□ -1.3
ATXN3-219ENST00000553488 EAF1Q96JC9 268 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-219ENST00000553488 ASB8Q9H765 288 aa6.96□□□□□ -1.3
ATXN3-219ENST00000553488 MRM3Q9HC36 420 aaKnown RBP6.96□□□□□ -1.3
ATXN3-219ENST00000553488 CHMP5Q9NZZ3 219 aa6.96□□□□□ -1.3
ATXN3-219ENST00000553488 CTTNBP2NLQ9P2B4 639 aa6.96□□□□□ -1.3
ATXN3-219ENST00000553488 SAE1Q9UBE0 346 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-219ENST00000553488 SUCOQ9UBS9 1254 aaKnown RBP6.96□□□□□ -1.3
ATXN3-219ENST00000553488 ITGB1BP2Q9UKP3 347 aa6.96□□□□□ -1.3
ATXN3-219ENST00000553488 PLCL2Q9UPR0 1127 aa6.96□□□□□ -1.3
ATXN3-219ENST00000553488 BZW2Q9Y6E2 419 aaKnown RBP6.96□□□□□ -1.3
ATXN3-219ENST00000553488 DNAJC13O75165 2243 aa6.96□□□□□ -1.3
ATXN3-219ENST00000553488 TRGV8A0A0C4DH27 118 aa6.95□□□□□ -1.3
ATXN3-219ENST00000553488 A0A1W2PQ72 361 aa6.95□□□□□ -1.3
ATXN3-219ENST00000553488 IFRD1O00458 451 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-219ENST00000553488 CCL21O00585 134 aa6.95□□□□□ -1.3
ATXN3-219ENST00000553488 RGS13O14921 159 aa6.95□□□□□ -1.3
ATXN3-219ENST00000553488 DSCR3O14972 297 aa6.95□□□□□ -1.3
ATXN3-219ENST00000553488 PRICKLE3O43900 615 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-219ENST00000553488 HPP00738 406 aa6.95□□□□□ -1.3
ATXN3-219ENST00000553488 KRT1P04264 644 aa6.95□□□□□ -1.3
ATXN3-219ENST00000553488 ATP1B2P14415 290 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-219ENST00000553488 ZFXP17010 805 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-219ENST00000553488 MAGP20916 626 aa6.95□□□□□ -1.3
ATXN3-219ENST00000553488 MST1P26927 711 aa6.95□□□□□ -1.3
ATXN3-219ENST00000553488 ACADLP28330 430 aa6.95□□□□□ -1.3
ATXN3-219ENST00000553488 SSTR2P30874 369 aa6.95□□□□□ -1.3
ATXN3-219ENST00000553488 ADRA1AP35348 466 aa6.95□□□□□ -1.3
ATXN3-219ENST00000553488 OLIG2Q13516 323 aa6.95□□□□□ -1.3
ATXN3-219ENST00000553488 TAF1AQ15573 450 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-219ENST00000553488 RBBP7Q16576 425 aa6.95□□□□□ -1.3
ATXN3-219ENST00000553488 IRAK1BP1Q5VVH5 260 aa6.95□□□□□ -1.3
ATXN3-219ENST00000553488 SASS6Q6UVJ0 657 aa6.95□□□□□ -1.3
ATXN3-219ENST00000553488 MFSD7Q6UXD7 560 aa6.95□□□□□ -1.3
ATXN3-219ENST00000553488 GFRALQ6UXV0 394 aa6.95□□□□□ -1.3
ATXN3-219ENST00000553488 SHISA6Q6ZSJ9 500 aa6.95□□□□□ -1.3
ATXN3-219ENST00000553488 TTLL10Q6ZVT0 673 aa6.95□□□□□ -1.3
ATXN3-219ENST00000553488 SNX20Q7Z614 316 aa6.95□□□□□ -1.3
ATXN3-219ENST00000553488 RFX6Q8HWS3 928 aa6.95□□□□□ -1.3
ATXN3-219ENST00000553488 OR1N1Q8NGS0 311 aa6.95□□□□□ -1.3
ATXN3-219ENST00000553488 TFB1MQ8WVM0 346 aaKnown RBP6.95□□□□□ -1.3
ATXN3-219ENST00000553488 TFGQ92734 400 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-219ENST00000553488 DLG3Q92796 817 aa6.95□□□□□ -1.3
ATXN3-219ENST00000553488 UBE2FQ969M7 185 aa6.95□□□□□ -1.3
ATXN3-219ENST00000553488 ULK4Q96C45 1275 aa6.95□□□□□ -1.3
ATXN3-219ENST00000553488 DCUN1D1Q96GG9 259 aa6.95□□□□□ -1.3
ATXN3-219ENST00000553488 ZNF285Q96NJ3 590 aa6.95□□□□□ -1.3
ATXN3-219ENST00000553488 QKIQ96PU8 341 aaKnown RBP eCLIP6.95□□□□□ -1.3
ATXN3-219ENST00000553488 LMF1Q96S06 567 aa6.95□□□□□ -1.3
ATXN3-219ENST00000553488 COPS8Q99627 209 aa6.95□□□□□ -1.3
ATXN3-219ENST00000553488 BPIFA3Q9BQP9 254 aa6.95□□□□□ -1.3
ATXN3-219ENST00000553488 NDC1Q9BTX1 674 aa6.95□□□□□ -1.3
ATXN3-219ENST00000553488 MENTQ9BUN1 341 aa6.95□□□□□ -1.3
ATXN3-219ENST00000553488 FICDQ9BVA6 458 aa6.95□□□□□ -1.3
ATXN3-219ENST00000553488 EURLQ9NYK6 297 aa6.95□□□□□ -1.3
ATXN3-219ENST00000553488 OR6C2Q9NZP2 312 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms