RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 RPS15P62841 145 aaKnown RBP17.71■□□□□ 0.43
PRPF40B-216ENST00000552301 YBX1P67809 324 aaKnown RBP17.71■□□□□ 0.43
PRPF40B-216ENST00000552301 RHDQ02161 417 aa17.71■□□□□ 0.43
PRPF40B-216ENST00000552301 BMPR2Q13873 1038 aa17.71■□□□□ 0.43
PRPF40B-216ENST00000552301 CSHL1Q14406 222 aa17.71■□□□□ 0.43
PRPF40B-216ENST00000552301 PTCHD3Q3KNS1 767 aa17.71■□□□□ 0.43
PRPF40B-216ENST00000552301 TAF1BQ53T94 588 aaPredicted RBP17.71■□□□□ 0.43
PRPF40B-216ENST00000552301 MROH9Q5TGP6 573 aa17.71■□□□□ 0.43
PRPF40B-216ENST00000552301 TRMT10CQ7L0Y3 403 aaKnown RBP17.71■□□□□ 0.43
PRPF40B-216ENST00000552301 CMC1Q7Z7K0 106 aa17.71■□□□□ 0.43
PRPF40B-216ENST00000552301 SLC38A9Q8NBW4 561 aa17.71■□□□□ 0.43
PRPF40B-216ENST00000552301 PROKR1Q8TCW9 393 aa17.71■□□□□ 0.43
PRPF40B-216ENST00000552301 RERGQ96A58 199 aaPredicted RBP17.71■□□□□ 0.43
PRPF40B-216ENST00000552301 DPH2Q9BQC3 489 aaPredicted RBP17.71■□□□□ 0.43
PRPF40B-216ENST00000552301 FUT8Q9BYC5 575 aa17.71■□□□□ 0.43
PRPF40B-216ENST00000552301 CHST8Q9H2A9 424 aa17.71■□□□□ 0.43
PRPF40B-216ENST00000552301 OARD1Q9Y530 152 aa17.71■□□□□ 0.43
PRPF40B-216ENST00000552301 HEATR5BQ9P2D3 2071 aa17.71■□□□□ 0.43
PRPF40B-216ENST00000552301 WISP3O95389 354 aaPredicted RBP17.7■□□□□ 0.42
PRPF40B-216ENST00000552301 EIF2S1P05198 315 aaKnown RBP17.7■□□□□ 0.42
PRPF40B-216ENST00000552301 RORAP35398 523 aa17.7■□□□□ 0.42
PRPF40B-216ENST00000552301 MSH2P43246 934 aa17.7■□□□□ 0.42
PRPF40B-216ENST00000552301 SERPINB8P50452 374 aa17.7■□□□□ 0.42
PRPF40B-216ENST00000552301 CDKL1Q00532 357 aa17.7■□□□□ 0.42
PRPF40B-216ENST00000552301 PPP1R3AQ16821 1122 aa17.7■□□□□ 0.42
PRPF40B-216ENST00000552301 UBAP2Q5T6F2 1119 aaKnown RBP17.7■□□□□ 0.42
PRPF40B-216ENST00000552301 YOD1Q5VVQ6 348 aaPredicted RBP17.7■□□□□ 0.42
PRPF40B-216ENST00000552301 ZNF425Q6IV72 752 aa17.7■□□□□ 0.42
PRPF40B-216ENST00000552301 RHBDD2Q6NTF9 364 aa17.7■□□□□ 0.42
PRPF40B-216ENST00000552301 FAM199XQ6PEV8 388 aaPredicted RBP17.7■□□□□ 0.42
PRPF40B-216ENST00000552301 LCTLQ6UWM7 567 aa17.7■□□□□ 0.42
PRPF40B-216ENST00000552301 CCDC91Q7Z6B0 441 aa17.7■□□□□ 0.42
PRPF40B-216ENST00000552301 PAQR7Q86WK9 346 aa17.7■□□□□ 0.42
PRPF40B-216ENST00000552301 SPATA6LQ8N4H0 392 aa17.7■□□□□ 0.42
PRPF40B-216ENST00000552301 UHMK1Q8TAS1 419 aaKnown RBP17.7■□□□□ 0.42
PRPF40B-216ENST00000552301 PAFAH2Q99487 392 aa17.7■□□□□ 0.42
PRPF40B-216ENST00000552301 C17orf62Q9BQA9 187 aa17.7■□□□□ 0.42
PRPF40B-216ENST00000552301 SGPP1Q9BX95 441 aa17.7■□□□□ 0.42
PRPF40B-216ENST00000552301 GPR87Q9BY21 358 aa17.7■□□□□ 0.42
PRPF40B-216ENST00000552301 CUEDC1Q9NWM3 386 aaPredicted RBP17.7■□□□□ 0.42
PRPF40B-216ENST00000552301 NDOR1Q9UHB4 597 aa17.7■□□□□ 0.42
PRPF40B-216ENST00000552301 TLK1Q9UKI8 766 aa17.7■□□□□ 0.42
PRPF40B-216ENST00000552301 RALYQ9UKM9 306 aaKnown RBP17.7■□□□□ 0.42
PRPF40B-216ENST00000552301 DSPP15924 2871 aaKnown RBP17.7■□□□□ 0.42
PRPF40B-216ENST00000552301 IGKV1-8A0A0C4DH67 115 aa17.69■□□□□ 0.42
PRPF40B-216ENST00000552301 EXOC1LA0A1B0GW35 172 aa17.69■□□□□ 0.42
PRPF40B-216ENST00000552301 POC1B-GALNT4F8VUJ3 575 aa17.69■□□□□ 0.42
PRPF40B-216ENST00000552301 H7BY64 318 aa17.69■□□□□ 0.42
PRPF40B-216ENST00000552301 NRP2O60462 931 aa17.69■□□□□ 0.42
PRPF40B-216ENST00000552301 S100BP04271 92 aaPredicted RBP17.69■□□□□ 0.42
PRPF40B-216ENST00000552301 CTSBP07858 339 aa17.69■□□□□ 0.42
PRPF40B-216ENST00000552301 ABHD2P08910 425 aa17.69■□□□□ 0.42
PRPF40B-216ENST00000552301 ATXN8OSP0DMR3 200 aa17.69■□□□□ 0.42
PRPF40B-216ENST00000552301 PRKAR1AP10644 381 aa17.69■□□□□ 0.42
PRPF40B-216ENST00000552301 CD1DP15813 335 aa17.69■□□□□ 0.42
PRPF40B-216ENST00000552301 ALAS2P22557 587 aa17.69■□□□□ 0.42
PRPF40B-216ENST00000552301 GRK3P35626 688 aa17.69■□□□□ 0.42
PRPF40B-216ENST00000552301 HNMTP50135 292 aa17.69■□□□□ 0.42
PRPF40B-216ENST00000552301 SERPINB9P50453 376 aa17.69■□□□□ 0.42
PRPF40B-216ENST00000552301 PMS2P54278 862 aa17.69■□□□□ 0.42
PRPF40B-216ENST00000552301 WASHC2DQ5SRD0 308 aa17.69■□□□□ 0.42
PRPF40B-216ENST00000552301 C1orf189Q5VU69 101 aa17.69■□□□□ 0.42
PRPF40B-216ENST00000552301 C16orf46Q6P387 395 aa17.69■□□□□ 0.42
PRPF40B-216ENST00000552301 GPSM1Q86YR5 675 aa17.69■□□□□ 0.42
PRPF40B-216ENST00000552301 GSPT2Q8IYD1 628 aaKnown RBP17.69■□□□□ 0.42
PRPF40B-216ENST00000552301 OR56A3Q8NH54 315 aa17.69■□□□□ 0.42
PRPF40B-216ENST00000552301 SLC44A1Q8WWI5 657 aa17.69■□□□□ 0.42
PRPF40B-216ENST00000552301 PYCR2Q96C36 320 aa17.69■□□□□ 0.42
PRPF40B-216ENST00000552301 PRAP1Q96NZ9 151 aa17.69■□□□□ 0.42
PRPF40B-216ENST00000552301 NMRAL1Q9HBL8 299 aa17.69■□□□□ 0.42
PRPF40B-216ENST00000552301 SNX15Q9NRS6 342 aa17.69■□□□□ 0.42
PRPF40B-216ENST00000552301 TMEM184CQ9NVA4 438 aa17.69■□□□□ 0.42
PRPF40B-216ENST00000552301 DHCR7Q9UBM7 475 aaKnown RBP17.69■□□□□ 0.42
PRPF40B-216ENST00000552301 GPN3Q9UHW5 284 aaPredicted RBP17.69■□□□□ 0.42
PRPF40B-216ENST00000552301 ACOT9Q9Y305 439 aa17.69■□□□□ 0.42
PRPF40B-216ENST00000552301 DYRK1BQ9Y463 629 aa17.69■□□□□ 0.42
PRPF40B-216ENST00000552301 MRPS18BQ9Y676 258 aaKnown RBP17.69■□□□□ 0.42
PRPF40B-216ENST00000552301 A0A087X1B8 175 aa17.68■□□□□ 0.42
PRPF40B-216ENST00000552301 NCF1BA6NI72 391 aaPredicted RBP17.68■□□□□ 0.42
PRPF40B-216ENST00000552301 NCF1CA8MVU1 366 aaPredicted RBP17.68■□□□□ 0.42
PRPF40B-216ENST00000552301 H3BMH7 237 aa17.68■□□□□ 0.42
PRPF40B-216ENST00000552301 KRT38O76015 456 aa17.68■□□□□ 0.42
PRPF40B-216ENST00000552301 LTA4HP09960 611 aaKnown RBP17.68■□□□□ 0.42
PRPF40B-216ENST00000552301 SLC35E2BP0CK96 405 aa17.68■□□□□ 0.42
PRPF40B-216ENST00000552301 NCF1P14598 390 aaPredicted RBP17.68■□□□□ 0.42
PRPF40B-216ENST00000552301 F8A1P23610 371 aa17.68■□□□□ 0.42
PRPF40B-216ENST00000552301 TYK2P29597 1187 aa17.68■□□□□ 0.42
PRPF40B-216ENST00000552301 DCDP81605 110 aaKnown RBP17.68■□□□□ 0.42
PRPF40B-216ENST00000552301 CDC20Q12834 499 aa17.68■□□□□ 0.42
PRPF40B-216ENST00000552301 FAM214AQ32MH5 1076 aa17.68■□□□□ 0.42
PRPF40B-216ENST00000552301 FRMPD2BQ6IN97 320 aa17.68■□□□□ 0.42
PRPF40B-216ENST00000552301 TTLL10Q6ZVT0 673 aa17.68■□□□□ 0.42
PRPF40B-216ENST00000552301 TCAIMQ8N3R3 496 aa17.68■□□□□ 0.42
PRPF40B-216ENST00000552301 CSNK1A1LQ8N752 337 aa17.68■□□□□ 0.42
PRPF40B-216ENST00000552301 EIF1ADQ8N9N8 165 aaKnown RBP17.68■□□□□ 0.42
PRPF40B-216ENST00000552301 EXT2Q93063 718 aa17.68■□□□□ 0.42
PRPF40B-216ENST00000552301 ZNF285Q96NJ3 590 aa17.68■□□□□ 0.42
PRPF40B-216ENST00000552301 UBL7Q96S82 380 aaPredicted RBP17.68■□□□□ 0.42
PRPF40B-216ENST00000552301 NLNQ9BYT8 704 aa17.68■□□□□ 0.42
PRPF40B-216ENST00000552301 FAM117AQ9C073 453 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms