RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 ARSFP54793 590 aa12.44□□□□□ -0.42
NPAS3-209ENST00000551008 MLLT10P55197 1068 aa12.44□□□□□ -0.42
NPAS3-209ENST00000551008 ARF3P61204 181 aaPredicted RBP12.44□□□□□ -0.42
NPAS3-209ENST00000551008 MRPS25P82663 173 aaKnown RBP12.44□□□□□ -0.42
NPAS3-209ENST00000551008 SSPNQ14714 243 aa12.44□□□□□ -0.42
NPAS3-209ENST00000551008 GRM7Q14831 915 aa12.44□□□□□ -0.42
NPAS3-209ENST00000551008 MORF4L2Q15014 288 aa12.44□□□□□ -0.42
NPAS3-209ENST00000551008 TTLL9Q3SXZ7 439 aa12.44□□□□□ -0.42
NPAS3-209ENST00000551008 BBS9Q3SYG4 887 aa12.44□□□□□ -0.42
NPAS3-209ENST00000551008 TCTE1Q5JU00 501 aa12.44□□□□□ -0.42
NPAS3-209ENST00000551008 SPANXN3Q5MJ09 141 aa12.44□□□□□ -0.42
NPAS3-209ENST00000551008 TEDDM1Q5T9Z0 273 aa12.44□□□□□ -0.42
NPAS3-209ENST00000551008 ICE2Q659A1 982 aa12.44□□□□□ -0.42
NPAS3-209ENST00000551008 MED25Q71SY5 747 aa12.44□□□□□ -0.42
NPAS3-209ENST00000551008 RAB43Q86YS6 212 aa12.44□□□□□ -0.42
NPAS3-209ENST00000551008 RBMXL3Q8N7X1 1067 aaKnown RBP12.44□□□□□ -0.42
NPAS3-209ENST00000551008 TMEM102Q8N9M5 508 aaPredicted RBP12.44□□□□□ -0.42
NPAS3-209ENST00000551008 MAGEC3Q8TD91 643 aa12.44□□□□□ -0.42
NPAS3-209ENST00000551008 EEF1AKMT1Q8WVE0 214 aa12.44□□□□□ -0.42
NPAS3-209ENST00000551008 CERS2Q96G23 380 aa12.44□□□□□ -0.42
NPAS3-209ENST00000551008 OR2A5Q96R48 311 aa12.44□□□□□ -0.42
NPAS3-209ENST00000551008 SMAD5Q99717 465 aaKnown RBP12.44□□□□□ -0.42
NPAS3-209ENST00000551008 NAPGQ99747 312 aaPredicted RBP12.44□□□□□ -0.42
NPAS3-209ENST00000551008 ZFYVE21Q9BQ24 234 aa12.44□□□□□ -0.42
NPAS3-209ENST00000551008 C17orf62Q9BQA9 187 aa12.44□□□□□ -0.42
NPAS3-209ENST00000551008 FAM114A2Q9NRY5 505 aa12.44□□□□□ -0.42
NPAS3-209ENST00000551008 P4HTMQ9NXG6 502 aa12.44□□□□□ -0.42
NPAS3-209ENST00000551008 NDOR1Q9UHB4 597 aa12.44□□□□□ -0.42
NPAS3-209ENST00000551008 IKZF3Q9UKT9 509 aa12.44□□□□□ -0.42
NPAS3-209ENST00000551008 CHMP2BQ9UQN3 213 aa12.44□□□□□ -0.42
NPAS3-209ENST00000551008 HS3ST3B1Q9Y662 390 aa12.44□□□□□ -0.42
NPAS3-209ENST00000551008 COMMD10Q9Y6G5 202 aa12.44□□□□□ -0.42
NPAS3-209ENST00000551008 ESPL1Q14674 2120 aa12.44□□□□□ -0.42
NPAS3-209ENST00000551008 USP9YO00507 2555 aaPredicted RBP12.43□□□□□ -0.42
NPAS3-209ENST00000551008 HYKKA2RU49 373 aa12.43□□□□□ -0.42
NPAS3-209ENST00000551008 A6NL46 340 aa12.43□□□□□ -0.42
NPAS3-209ENST00000551008 SMAPO00193 183 aa12.43□□□□□ -0.42
NPAS3-209ENST00000551008 EIF3FO00303 357 aaPredicted RBP12.43□□□□□ -0.42
NPAS3-209ENST00000551008 SOCS6O14544 535 aa12.43□□□□□ -0.42
NPAS3-209ENST00000551008 SRPX2O60687 465 aaPredicted RBP12.43□□□□□ -0.42
NPAS3-209ENST00000551008 ALOX12BO75342 701 aa12.43□□□□□ -0.42
NPAS3-209ENST00000551008 CMPK1P30085 196 aa12.43□□□□□ -0.42
NPAS3-209ENST00000551008 RPL21P46778 160 aaKnown RBP12.43□□□□□ -0.42
NPAS3-209ENST00000551008 ITGA8P53708 1063 aa12.43□□□□□ -0.42
NPAS3-209ENST00000551008 DR1Q01658 176 aa12.43□□□□□ -0.42
NPAS3-209ENST00000551008 PRDX1Q06830 199 aaKnown RBP12.43□□□□□ -0.42
NPAS3-209ENST00000551008 RAPSNQ13702 412 aa12.43□□□□□ -0.42
NPAS3-209ENST00000551008 PHKG1Q16816 387 aa12.43□□□□□ -0.42
NPAS3-209ENST00000551008 HKDC1Q2TB90 917 aa12.43□□□□□ -0.42
NPAS3-209ENST00000551008 PRR30Q53SZ7 412 aaPredicted RBP12.43□□□□□ -0.42
NPAS3-209ENST00000551008 DCAF10Q5QP82 559 aa12.43□□□□□ -0.42
NPAS3-209ENST00000551008 YOD1Q5VVQ6 348 aaPredicted RBP12.43□□□□□ -0.42
NPAS3-209ENST00000551008 PAQR3Q6TCH7 311 aa12.43□□□□□ -0.42
NPAS3-209ENST00000551008 SHISA6Q6ZSJ9 500 aa12.43□□□□□ -0.42
NPAS3-209ENST00000551008 SYDE1Q6ZW31 735 aaPredicted RBP12.43□□□□□ -0.42
NPAS3-209ENST00000551008 GALNT7Q86SF2 657 aa12.43□□□□□ -0.42
NPAS3-209ENST00000551008 PLD3Q8IV08 490 aa12.43□□□□□ -0.42
NPAS3-209ENST00000551008 C17orf53Q8N3J3 647 aaPredicted RBP12.43□□□□□ -0.42
NPAS3-209ENST00000551008 TEX19Q8NA77 164 aa12.43□□□□□ -0.42
NPAS3-209ENST00000551008 PTERQ96BW5 349 aa12.43□□□□□ -0.42
NPAS3-209ENST00000551008 OLFM1Q99784 485 aa12.43□□□□□ -0.42
NPAS3-209ENST00000551008 CCDC68Q9H2F9 335 aa12.43□□□□□ -0.42
NPAS3-209ENST00000551008 WDR54Q9H977 334 aa12.43□□□□□ -0.42
NPAS3-209ENST00000551008 MRPS30Q9NP92 439 aaKnown RBP12.43□□□□□ -0.42
NPAS3-209ENST00000551008 ANKMY1Q9P2S6 941 aa12.43□□□□□ -0.42
NPAS3-209ENST00000551008 ZC3H7BQ9UGR2 993 aaKnown RBP12.43□□□□□ -0.42
NPAS3-209ENST00000551008 GPN3Q9UHW5 284 aaPredicted RBP12.43□□□□□ -0.42
NPAS3-209ENST00000551008 PDE10AQ9Y233 779 aa12.43□□□□□ -0.42
NPAS3-209ENST00000551008 RUVBL1Q9Y265 456 aaKnown RBP12.43□□□□□ -0.42
NPAS3-209ENST00000551008 MRPS2Q9Y399 296 aaKnown RBP12.43□□□□□ -0.42
NPAS3-209ENST00000551008 PSAT1Q9Y617 370 aa12.43□□□□□ -0.42
NPAS3-209ENST00000551008 SAR1BQ9Y6B6 198 aa12.43□□□□□ -0.42
NPAS3-209ENST00000551008 MAU2Q9Y6X3 613 aa12.43□□□□□ -0.42
NPAS3-209ENST00000551008 IGLV3-12A0A075B6K2 115 aa12.42□□□□□ -0.42
NPAS3-209ENST00000551008 E7ESA3 106 aa12.42□□□□□ -0.42
NPAS3-209ENST00000551008 HAT1O14929 419 aa12.42□□□□□ -0.42
NPAS3-209ENST00000551008 FOXS1O43638 330 aa12.42□□□□□ -0.42
NPAS3-209ENST00000551008 VPS26AO75436 327 aa12.42□□□□□ -0.42
NPAS3-209ENST00000551008 TTC4O95801 387 aa12.42□□□□□ -0.42
NPAS3-209ENST00000551008 ALBP02768 609 aa12.42□□□□□ -0.42
NPAS3-209ENST00000551008 RPA3P35244 121 aaPredicted RBP12.42□□□□□ -0.42
NPAS3-209ENST00000551008 CARSP49589 748 aaKnown RBP12.42□□□□□ -0.42
NPAS3-209ENST00000551008 CBLBQ13191 982 aa12.42□□□□□ -0.42
NPAS3-209ENST00000551008 KIRREL2Q6UWL6 708 aa12.42□□□□□ -0.42
NPAS3-209ENST00000551008 TMEM207Q6UWW9 146 aa12.42□□□□□ -0.42
NPAS3-209ENST00000551008 KIAA0408Q6ZU52 694 aa12.42□□□□□ -0.42
NPAS3-209ENST00000551008 UBE2R2Q712K3 238 aaPredicted RBP12.42□□□□□ -0.42
NPAS3-209ENST00000551008 VN1R4Q7Z5H5 301 aa12.42□□□□□ -0.42
NPAS3-209ENST00000551008 PCGF5Q86SE9 256 aa12.42□□□□□ -0.42
NPAS3-209ENST00000551008 RAB42Q8N4Z0 105 aa12.42□□□□□ -0.42
NPAS3-209ENST00000551008 AMER2Q8N7J2 671 aa12.42□□□□□ -0.42
NPAS3-209ENST00000551008 AMER3Q8N944 861 aa12.42□□□□□ -0.42
NPAS3-209ENST00000551008 TTC29Q8NA56 475 aaPredicted RBP12.42□□□□□ -0.42
NPAS3-209ENST00000551008 CFAP36Q96G28 342 aa12.42□□□□□ -0.42
NPAS3-209ENST00000551008 MCMBPQ9BTE3 642 aa12.42□□□□□ -0.42
NPAS3-209ENST00000551008 SOX17Q9H6I2 414 aaPredicted RBP12.42□□□□□ -0.42
NPAS3-209ENST00000551008 ZNF552Q9H707 407 aaPredicted RBP12.42□□□□□ -0.42
NPAS3-209ENST00000551008 ZBTB20Q9HC78 741 aaPredicted RBP12.42□□□□□ -0.42
NPAS3-209ENST00000551008 TRMT6Q9UJA5 497 aaKnown RBP12.42□□□□□ -0.42
NPAS3-209ENST00000551008 SPTBN1Q01082 2364 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms