RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 DPH7Q9BTV6 452 aa12.93□□□□□ -0.34
TROAP-211ENST00000549891 YIPF2Q9BWQ6 316 aa12.93□□□□□ -0.34
TROAP-211ENST00000549891 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.93□□□□□ -0.34
TROAP-211ENST00000549891 CHRAC1Q9NRG0 131 aa12.93□□□□□ -0.34
TROAP-211ENST00000549891 PAK5Q9P286 719 aa12.93□□□□□ -0.34
TROAP-211ENST00000549891 MARCH4Q9P2E8 410 aaPredicted RBP12.93□□□□□ -0.34
TROAP-211ENST00000549891 TRPC4Q9UBN4 977 aa12.93□□□□□ -0.34
TROAP-211ENST00000549891 KLF2Q9Y5W3 355 aaPredicted RBP12.93□□□□□ -0.34
TROAP-211ENST00000549891 NFS1Q9Y697 457 aa12.93□□□□□ -0.34
TROAP-211ENST00000549891 SCN2AQ99250 2005 aa12.93□□□□□ -0.34
TROAP-211ENST00000549891 CSMD1Q96PZ7 3565 aa12.92□□□□□ -0.34
TROAP-211ENST00000549891 A0A1W2PPV9 198 aa12.92□□□□□ -0.34
TROAP-211ENST00000549891 H3BMM5 538 aa12.92□□□□□ -0.34
TROAP-211ENST00000549891 TXNDC9O14530 226 aa12.92□□□□□ -0.34
TROAP-211ENST00000549891 MED26O95402 600 aa12.92□□□□□ -0.34
TROAP-211ENST00000549891 HEXBP07686 556 aa12.92□□□□□ -0.34
TROAP-211ENST00000549891 ANXA5P08758 320 aa12.92□□□□□ -0.34
TROAP-211ENST00000549891 PKMP14618 531 aaKnown RBP12.92□□□□□ -0.34
TROAP-211ENST00000549891 TDGF1P3P51864 188 aa12.92□□□□□ -0.34
TROAP-211ENST00000549891 PRTGQ2VWP7 1150 aa12.92□□□□□ -0.34
TROAP-211ENST00000549891 GARNL3Q5VVW2 1013 aa12.92□□□□□ -0.34
TROAP-211ENST00000549891 TMEM207Q6UWW9 146 aa12.92□□□□□ -0.34
TROAP-211ENST00000549891 RAD9BQ6WBX8 426 aa12.92□□□□□ -0.34
TROAP-211ENST00000549891 MCEMP1Q8IX19 187 aa12.92□□□□□ -0.34
TROAP-211ENST00000549891 OTUD6BQ8N6M0 293 aa12.92□□□□□ -0.34
TROAP-211ENST00000549891 DNAJB8Q8NHS0 232 aa12.92□□□□□ -0.34
TROAP-211ENST00000549891 PSMF1Q92530 271 aa12.92□□□□□ -0.34
TROAP-211ENST00000549891 RERGQ96A58 199 aaPredicted RBP12.92□□□□□ -0.34
TROAP-211ENST00000549891 HES6Q96HZ4 224 aa12.92□□□□□ -0.34
TROAP-211ENST00000549891 C10orf90Q96M02 699 aa12.92□□□□□ -0.34
TROAP-211ENST00000549891 TEP1Q99973 2627 aaKnown RBP12.92□□□□□ -0.34
TROAP-211ENST00000549891 UNKQ9C0B0 810 aaKnown RBP12.92□□□□□ -0.34
TROAP-211ENST00000549891 IL22Q9GZX6 179 aa12.92□□□□□ -0.34
TROAP-211ENST00000549891 RNF32Q9H0A6 362 aa12.92□□□□□ -0.34
TROAP-211ENST00000549891 MRPS30Q9NP92 439 aaKnown RBP12.92□□□□□ -0.34
TROAP-211ENST00000549891 MKKSQ9NPJ1 570 aaPredicted RBP12.92□□□□□ -0.34
TROAP-211ENST00000549891 IGHV1-45A0A0A0MS14 117 aa12.91□□□□□ -0.34
TROAP-211ENST00000549891 ZNF839A8K0R7 811 aa12.91□□□□□ -0.34
TROAP-211ENST00000549891 H0YGG7 62 aa12.91□□□□□ -0.34
TROAP-211ENST00000549891 CCNDBP1O95273 360 aa12.91□□□□□ -0.34
TROAP-211ENST00000549891 RASAL1O95294 804 aa12.91□□□□□ -0.34
TROAP-211ENST00000549891 MATN4O95460 622 aa12.91□□□□□ -0.34
TROAP-211ENST00000549891 PRF1P14222 555 aa12.91□□□□□ -0.34
TROAP-211ENST00000549891 ATP5DP30049 168 aa12.91□□□□□ -0.34
TROAP-211ENST00000549891 RPA3P35244 121 aaPredicted RBP12.91□□□□□ -0.34
TROAP-211ENST00000549891 EIF3BP55884 814 aaKnown RBP12.91□□□□□ -0.34
TROAP-211ENST00000549891 KCNK10P57789 538 aa12.91□□□□□ -0.34
TROAP-211ENST00000549891 ARF3P61204 181 aaPredicted RBP12.91□□□□□ -0.34
TROAP-211ENST00000549891 EEF1A2Q05639 463 aaKnown RBP12.91□□□□□ -0.34
TROAP-211ENST00000549891 RBPJQ06330 500 aa12.91□□□□□ -0.34
TROAP-211ENST00000549891 ARHGAP19Q14CB8 494 aa12.91□□□□□ -0.34
TROAP-211ENST00000549891 CCSMST1Q4G0I0 132 aa12.91□□□□□ -0.34
TROAP-211ENST00000549891 ANKRD20A4Q4UJ75 823 aa12.91□□□□□ -0.34
TROAP-211ENST00000549891 RNF187Q5TA31 235 aaPredicted RBP12.91□□□□□ -0.34
TROAP-211ENST00000549891 MRNIPQ6NTE8 343 aa12.91□□□□□ -0.34
TROAP-211ENST00000549891 FBXO42Q6P3S6 717 aa12.91□□□□□ -0.34
TROAP-211ENST00000549891 C4orf22Q6V702 233 aa12.91□□□□□ -0.34
TROAP-211ENST00000549891 SDCCAG8Q86SQ7 713 aaPredicted RBP12.91□□□□□ -0.34
TROAP-211ENST00000549891 LAPTM4BQ86VI4 370 aa12.91□□□□□ -0.34
TROAP-211ENST00000549891 SIRT6Q8N6T7 355 aa12.91□□□□□ -0.34
TROAP-211ENST00000549891 CSNK1A1LQ8N752 337 aa12.91□□□□□ -0.34
TROAP-211ENST00000549891 OR9A1PQ8NGU1 263 aa12.91□□□□□ -0.34
TROAP-211ENST00000549891 SMPDL3AQ92484 453 aa12.91□□□□□ -0.34
TROAP-211ENST00000549891 MMABQ96EY8 250 aaPredicted RBP12.91□□□□□ -0.34
TROAP-211ENST00000549891 TAAR6Q96RI8 345 aa12.91□□□□□ -0.34
TROAP-211ENST00000549891 PLCD4Q9BRC7 762 aa12.91□□□□□ -0.34
TROAP-211ENST00000549891 MESP1Q9BRJ9 268 aa12.91□□□□□ -0.34
TROAP-211ENST00000549891 ACAT2Q9BWD1 397 aa12.91□□□□□ -0.34
TROAP-211ENST00000549891 TGIF2Q9GZN2 237 aa12.91□□□□□ -0.34
TROAP-211ENST00000549891 CHST11Q9NPF2 352 aa12.91□□□□□ -0.34
TROAP-211ENST00000549891 EIF2B3Q9NR50 452 aaKnown RBP12.91□□□□□ -0.34
TROAP-211ENST00000549891 FAM114A2Q9NRY5 505 aa12.91□□□□□ -0.34
TROAP-211ENST00000549891 TREX1Q9NSU2 369 aa12.91□□□□□ -0.34
TROAP-211ENST00000549891 PLA2G3Q9NZ20 509 aa12.91□□□□□ -0.34
TROAP-211ENST00000549891 BFARQ9NZS9 450 aa12.91□□□□□ -0.34
TROAP-211ENST00000549891 ABI3Q9P2A4 366 aa12.91□□□□□ -0.34
TROAP-211ENST00000549891 TEKT2Q9UIF3 430 aa12.91□□□□□ -0.34
TROAP-211ENST00000549891 RUVBL2Q9Y230 463 aaKnown RBP12.91□□□□□ -0.34
TROAP-211ENST00000549891 TRGV8A0A0C4DH27 118 aa12.9□□□□□ -0.34
TROAP-211ENST00000549891 NRP2O60462 931 aa12.9□□□□□ -0.34
TROAP-211ENST00000549891 ERGP11308 486 aa12.9□□□□□ -0.34
TROAP-211ENST00000549891 EZRP15311 586 aaKnown RBP12.9□□□□□ -0.34
TROAP-211ENST00000549891 PTGER4P35408 488 aa12.9□□□□□ -0.34
TROAP-211ENST00000549891 HSD17B2P37059 387 aa12.9□□□□□ -0.34
TROAP-211ENST00000549891 SLC26A3P40879 764 aa12.9□□□□□ -0.34
TROAP-211ENST00000549891 NPY2RP49146 381 aa12.9□□□□□ -0.34
TROAP-211ENST00000549891 CASP6P55212 293 aa12.9□□□□□ -0.34
TROAP-211ENST00000549891 SESN2P58004 480 aaPredicted RBP12.9□□□□□ -0.34
TROAP-211ENST00000549891 FASTKQ14296 549 aaKnown RBP12.9□□□□□ -0.34
TROAP-211ENST00000549891 LONRF1Q17RB8 773 aa12.9□□□□□ -0.34
TROAP-211ENST00000549891 ABHD17BQ5VST6 288 aa12.9□□□□□ -0.34
TROAP-211ENST00000549891 FAAH2Q6GMR7 532 aa12.9□□□□□ -0.34
TROAP-211ENST00000549891 RPTNQ6XPR3 784 aa12.9□□□□□ -0.34
TROAP-211ENST00000549891 TCF12Q99081 682 aa12.9□□□□□ -0.34
TROAP-211ENST00000549891 BAG1Q99933 345 aaPredicted RBP12.9□□□□□ -0.34
TROAP-211ENST00000549891 TUBB6Q9BUF5 446 aa12.9□□□□□ -0.34
TROAP-211ENST00000549891 DRC3Q9H069 523 aa12.9□□□□□ -0.34
TROAP-211ENST00000549891 STOX2Q9P2F5 926 aaPredicted RBP12.9□□□□□ -0.34
TROAP-211ENST00000549891 SEC14L3Q9UDX4 400 aa12.9□□□□□ -0.34
TROAP-211ENST00000549891 RUVBL1Q9Y265 456 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms