RNA–Protein interactions for RNA: ENST00000549362.1

USP25-210, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 2

Gene USP25, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-210ENST00000549362 CLCA4Q14CN2 919 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 CA9Q16790 459 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 ST3GAL2Q16842 350 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 FAM83EQ2M2I3 478 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 LSM12Q3MHD2 195 aaKnown RBP4.28□□□□□ -1.72
USP25-210ENST00000549362 TRIM60Q495X7 471 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 CTXN3Q4LDR2 81 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 SLC9B1Q4ZJI4 515 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 PIGGQ5H8A4 983 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 PCID2Q5JVF3 399 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 LRRC8EQ6NSJ5 796 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 TRNP1Q6NT89 227 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 CCDC144NLQ6NUI1 221 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 RWDD4Q6NW29 188 aaKnown RBP4.28□□□□□ -1.72
USP25-210ENST00000549362 NOTUMQ6P988 496 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 RBM44Q6ZP01 1051 aaKnown RBP4.28□□□□□ -1.72
USP25-210ENST00000549362 GPR141Q7Z602 305 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 ACOT1Q86TX2 421 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 SATL1Q86VE3 508 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 CAMK1DQ8IU85 385 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 ERI1Q8IV48 349 aaKnown RBP4.28□□□□□ -1.72
USP25-210ENST00000549362 DEFB106AQ8N104 65 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 ZNF567Q8N184 647 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 NUP93Q8N1F7 819 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 LRRC43Q8N309 656 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 APPL2Q8NEU8 664 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 OR52K1Q8NGK4 314 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 ARNTL2Q8WYA1 636 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 POP5Q969H6 163 aaKnown RBP4.28□□□□□ -1.72
USP25-210ENST00000549362 ITFG2Q969R8 447 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.28□□□□□ -1.72
USP25-210ENST00000549362 NACC2Q96BF6 587 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 ROPN1LQ96C74 230 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 RCN3Q96D15 328 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 R3HDM4Q96D70 268 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 DUS3LQ96G46 650 aaKnown RBP4.28□□□□□ -1.72
USP25-210ENST00000549362 RMND5BQ96G75 393 aaPredicted RBP4.28□□□□□ -1.72
USP25-210ENST00000549362 LOXL4Q96JB6 756 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 VPS39Q96JC1 886 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 CNBD2Q96M20 576 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 ZNF778Q96MU6 729 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 BIRC8Q96P09 236 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 LENG8Q96PV6 779 aaPredicted RBP4.28□□□□□ -1.72
USP25-210ENST00000549362 HNRNPABQ99729 332 aaKnown RBP4.28□□□□□ -1.72
USP25-210ENST00000549362 CCT7Q99832 543 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 HOPXQ9BPY8 73 aaPredicted RBP4.28□□□□□ -1.72
USP25-210ENST00000549362 LBHD1Q9BQE6 289 aaPredicted RBP4.28□□□□□ -1.72
USP25-210ENST00000549362 GATA5Q9BWX5 397 aaPredicted RBP4.28□□□□□ -1.72
USP25-210ENST00000549362 YTHDF1Q9BYJ9 559 aaKnown RBP4.28□□□□□ -1.72
USP25-210ENST00000549362 GPR63Q9BZJ6 419 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 PAIP1Q9H074 479 aaKnown RBP4.28□□□□□ -1.72
USP25-210ENST00000549362 COPS7BQ9H9Q2 264 aaPredicted RBP4.28□□□□□ -1.72
USP25-210ENST00000549362 PLAC1Q9HBJ0 212 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 SPAG4Q9NPE6 437 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 CNGB3Q9NQW8 809 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 ENTPD7Q9NQZ7 604 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 IARS2Q9NSE4 1012 aaKnown RBP4.28□□□□□ -1.72
USP25-210ENST00000549362 OLA1Q9NTK5 396 aaKnown RBP4.28□□□□□ -1.72
USP25-210ENST00000549362 FAM49BQ9NUQ9 324 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 GID8Q9NWU2 228 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 MTMR10Q9NXD2 777 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 GDAP2Q9NXN4 497 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 ADA2Q9NZK5 511 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 RSL24D1Q9UHA3 163 aaKnown RBP4.28□□□□□ -1.72
USP25-210ENST00000549362 RIMS3Q9UJD0 308 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 FAF1Q9UNN5 650 aaPredicted RBP4.28□□□□□ -1.72
USP25-210ENST00000549362 SLC8A2Q9UPR5 921 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 RUVBL2Q9Y230 463 aaKnown RBP4.28□□□□□ -1.72
USP25-210ENST00000549362 RLFQ13129 1914 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 ANK1P16157 1881 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 FER1L6Q2WGJ9 1857 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 BRWD3Q6RI45 1802 aa4.28□□□□□ -1.72
USP25-210ENST00000549362 CITO14578 2027 aa4.28□□□□□ -1.73
USP25-210ENST00000549362 TBC1D3DA0A087WVF3 549 aa4.27□□□□□ -1.73
USP25-210ENST00000549362 TBC1D3IA0A087WXS9 549 aa4.27□□□□□ -1.73
USP25-210ENST00000549362 TBC1D3EA0A087X179 549 aa4.27□□□□□ -1.73
USP25-210ENST00000549362 TBC1D3KA0A087X1G2 549 aa4.27□□□□□ -1.73
USP25-210ENST00000549362 ZCWPW2A0A1B0GU75 182 aa4.27□□□□□ -1.73
USP25-210ENST00000549362 TBC1D3BA6NDS4 549 aa4.27□□□□□ -1.73
USP25-210ENST00000549362 TBC1D3FA6NER0 549 aaPredicted RBP4.27□□□□□ -1.73
USP25-210ENST00000549362 UNC119BA6NIH7 251 aa4.27□□□□□ -1.73
USP25-210ENST00000549362 TBC1D3LB9A6J9 549 aa4.27□□□□□ -1.73
USP25-210ENST00000549362 G3V2L1 256 aa4.27□□□□□ -1.73
USP25-210ENST00000549362 STX16-NPEPL1H3BU86 382 aa4.27□□□□□ -1.73
USP25-210ENST00000549362 M0QYT0 321 aa4.27□□□□□ -1.73
USP25-210ENST00000549362 PSMD12O00232 456 aaPredicted RBP4.27□□□□□ -1.73
USP25-210ENST00000549362 CXCL11O14625 94 aa4.27□□□□□ -1.73
USP25-210ENST00000549362 STX16O14662 325 aa4.27□□□□□ -1.73
USP25-210ENST00000549362 KIAA0355O15063 1070 aa4.27□□□□□ -1.73
USP25-210ENST00000549362 UBDO15205 165 aa4.27□□□□□ -1.73
USP25-210ENST00000549362 SEPT4O43236 478 aa4.27□□□□□ -1.73
USP25-210ENST00000549362 HNRNPRO43390 633 aaKnown RBP4.27□□□□□ -1.73
USP25-210ENST00000549362 ZBTB14O43829 449 aa4.27□□□□□ -1.73
USP25-210ENST00000549362 TSPAN1O60635 241 aa4.27□□□□□ -1.73
USP25-210ENST00000549362 VAPBO95292 243 aa4.27□□□□□ -1.73
USP25-210ENST00000549362 BMP10O95393 424 aa4.27□□□□□ -1.73
USP25-210ENST00000549362 PGM3O95394 542 aa4.27□□□□□ -1.73
USP25-210ENST00000549362 H6PDO95479 791 aa4.27□□□□□ -1.73
USP25-210ENST00000549362 ESRRBO95718 433 aa4.27□□□□□ -1.73
USP25-210ENST00000549362 LGALS2P05162 132 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms