RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 KRT14P02533 472 aa16.58■□□□□ 0.24
CHMP1A-205ENST00000548650 CATP04040 527 aaKnown RBP16.58■□□□□ 0.24
CHMP1A-205ENST00000548650 EIF2S1P05198 315 aaKnown RBP16.58■□□□□ 0.24
CHMP1A-205ENST00000548650 ZGLP1P0C6A0 271 aa16.58■□□□□ 0.24
CHMP1A-205ENST00000548650 ERVK-10P10266 1014 aa16.58■□□□□ 0.24
CHMP1A-205ENST00000548650 MLNP12872 115 aa16.58■□□□□ 0.24
CHMP1A-205ENST00000548650 RPA3P35244 121 aaPredicted RBP16.58■□□□□ 0.24
CHMP1A-205ENST00000548650 CARSP49589 748 aaKnown RBP16.58■□□□□ 0.24
CHMP1A-205ENST00000548650 EMP3P54852 163 aa16.58■□□□□ 0.24
CHMP1A-205ENST00000548650 ARF3P61204 181 aaPredicted RBP16.58■□□□□ 0.24
CHMP1A-205ENST00000548650 SARNPP82979 210 aaKnown RBP16.58■□□□□ 0.24
CHMP1A-205ENST00000548650 DHX34Q14147 1143 aaKnown RBP16.58■□□□□ 0.24
CHMP1A-205ENST00000548650 AGAP7PQ5VUJ5 663 aa16.58■□□□□ 0.24
CHMP1A-205ENST00000548650 ZNF425Q6IV72 752 aa16.58■□□□□ 0.24
CHMP1A-205ENST00000548650 FBXO42Q6P3S6 717 aa16.58■□□□□ 0.24
CHMP1A-205ENST00000548650 ZNF549Q6P9A3 640 aa16.58■□□□□ 0.24
CHMP1A-205ENST00000548650 NEK10Q6ZWH5 1172 aa16.58■□□□□ 0.24
CHMP1A-205ENST00000548650 DENND6AQ8IWF6 608 aa16.58■□□□□ 0.24
CHMP1A-205ENST00000548650 REXO1L1PQ8IX06 675 aa16.58■□□□□ 0.24
CHMP1A-205ENST00000548650 PARP9Q8IXQ6 854 aa16.58■□□□□ 0.24
CHMP1A-205ENST00000548650 PRSS58Q8IYP2 241 aa16.58■□□□□ 0.24
CHMP1A-205ENST00000548650 AGGF1Q8N302 714 aaeCLIP16.58■□□□□ 0.24
CHMP1A-205ENST00000548650 RASGEF1CQ8N431 466 aa16.58■□□□□ 0.24
CHMP1A-205ENST00000548650 CABS1Q96KC9 395 aa16.58■□□□□ 0.24
CHMP1A-205ENST00000548650 SERPINB12Q96P63 405 aa16.58■□□□□ 0.24
CHMP1A-205ENST00000548650 AGAP4Q96P64 663 aa16.58■□□□□ 0.24
CHMP1A-205ENST00000548650 PKP4Q99569 1192 aa16.58■□□□□ 0.24
CHMP1A-205ENST00000548650 LHPPQ9H008 270 aa16.58■□□□□ 0.24
CHMP1A-205ENST00000548650 MRPS30Q9NP92 439 aaKnown RBP16.58■□□□□ 0.24
CHMP1A-205ENST00000548650 SAMD15Q9P1V8 674 aa16.58■□□□□ 0.24
CHMP1A-205ENST00000548650 ZNF282Q9UDV7 671 aaPredicted RBP16.58■□□□□ 0.24
CHMP1A-205ENST00000548650 TAC3Q9UHF0 121 aa16.58■□□□□ 0.24
CHMP1A-205ENST00000548650 ERRFI1Q9UJM3 462 aaPredicted RBP16.58■□□□□ 0.24
CHMP1A-205ENST00000548650 RUVBL1Q9Y265 456 aaKnown RBP16.58■□□□□ 0.24
CHMP1A-205ENST00000548650 PPP2R2CQ9Y2T4 447 aa16.58■□□□□ 0.24
CHMP1A-205ENST00000548650 NEU2Q9Y3R4 380 aa16.58■□□□□ 0.24
CHMP1A-205ENST00000548650 SVILO95425 2214 aa16.57■□□□□ 0.24
CHMP1A-205ENST00000548650 VPS26AO75436 327 aa16.57■□□□□ 0.24
CHMP1A-205ENST00000548650 SLC16A8O95907 504 aa16.57■□□□□ 0.24
CHMP1A-205ENST00000548650 HPP00738 406 aa16.57■□□□□ 0.24
CHMP1A-205ENST00000548650 ACPPP15309 386 aa16.57■□□□□ 0.24
CHMP1A-205ENST00000548650 FBLP22087 321 aaKnown RBP16.57■□□□□ 0.24
CHMP1A-205ENST00000548650 SLC1A2P43004 574 aa16.57■□□□□ 0.24
CHMP1A-205ENST00000548650 MAGEA3P43357 314 aa16.57■□□□□ 0.24
CHMP1A-205ENST00000548650 PNLIPRP1P54315 467 aa16.57■□□□□ 0.24
CHMP1A-205ENST00000548650 CUL1Q13616 776 aa16.57■□□□□ 0.24
CHMP1A-205ENST00000548650 DSG2Q14126 1118 aa16.57■□□□□ 0.24
CHMP1A-205ENST00000548650 TTLL9Q3SXZ7 439 aa16.57■□□□□ 0.24
CHMP1A-205ENST00000548650 C4orf17Q53FE4 359 aa16.57■□□□□ 0.24
CHMP1A-205ENST00000548650 IRAK1BP1Q5VVH5 260 aa16.57■□□□□ 0.24
CHMP1A-205ENST00000548650 ICE2Q659A1 982 aa16.57■□□□□ 0.24
CHMP1A-205ENST00000548650 ARHGEF39Q8N4T4 335 aa16.57■□□□□ 0.24
CHMP1A-205ENST00000548650 CSNK1A1LQ8N752 337 aa16.57■□□□□ 0.24
CHMP1A-205ENST00000548650 FBXO15Q8NCQ5 510 aaPredicted RBP16.57■□□□□ 0.24
CHMP1A-205ENST00000548650 PPFIBP2Q8ND30 876 aa16.57■□□□□ 0.24
CHMP1A-205ENST00000548650 ZNF480Q8WV37 535 aa16.57■□□□□ 0.24
CHMP1A-205ENST00000548650 KCNJ9Q92806 393 aa16.57■□□□□ 0.24
CHMP1A-205ENST00000548650 MIEF2Q96C03 454 aa16.57■□□□□ 0.24
CHMP1A-205ENST00000548650 VPS50Q96JG6 964 aa16.57■□□□□ 0.24
CHMP1A-205ENST00000548650 XAB2Q9HCS7 855 aaKnown RBP16.57■□□□□ 0.24
CHMP1A-205ENST00000548650 FBXO6Q9NRD1 293 aaPredicted RBP16.57■□□□□ 0.24
CHMP1A-205ENST00000548650 COPG1Q9Y678 874 aaKnown RBP16.57■□□□□ 0.24
CHMP1A-205ENST00000548650 A0A1W2PQ72 361 aa16.56■□□□□ 0.24
CHMP1A-205ENST00000548650 A1L4Q6 167 aa16.56■□□□□ 0.24
CHMP1A-205ENST00000548650 ANKUB1A6NFN9 424 aa16.56■□□□□ 0.24
CHMP1A-205ENST00000548650 E7ENX8 843 aa16.56■□□□□ 0.24
CHMP1A-205ENST00000548650 GOLGA8MH3BSY2 632 aa16.56■□□□□ 0.24
CHMP1A-205ENST00000548650 E2F3O00716 465 aa16.56■□□□□ 0.24
CHMP1A-205ENST00000548650 MAP2K7O14733 419 aa16.56■□□□□ 0.24
CHMP1A-205ENST00000548650 KIF5CO60282 957 aa16.56■□□□□ 0.24
CHMP1A-205ENST00000548650 CCNDBP1O95273 360 aa16.56■□□□□ 0.24
CHMP1A-205ENST00000548650 DDAH2O95865 285 aa16.56■□□□□ 0.24
CHMP1A-205ENST00000548650 LDLRP01130 860 aa16.56■□□□□ 0.24
CHMP1A-205ENST00000548650 EZRP15311 586 aaKnown RBP16.56■□□□□ 0.24
CHMP1A-205ENST00000548650 TSFMP43897 325 aaKnown RBP16.56■□□□□ 0.24
CHMP1A-205ENST00000548650 TAP2Q03519 686 aa16.56■□□□□ 0.24
CHMP1A-205ENST00000548650 OCA2Q04671 838 aa16.56■□□□□ 0.24
CHMP1A-205ENST00000548650 CTBP1Q13363 440 aa16.56■□□□□ 0.24
CHMP1A-205ENST00000548650 TSTA3Q13630 321 aaPredicted RBP16.56■□□□□ 0.24
CHMP1A-205ENST00000548650 CYP1B1Q16678 543 aa16.56■□□□□ 0.24
CHMP1A-205ENST00000548650 HKDC1Q2TB90 917 aa16.56■□□□□ 0.24
CHMP1A-205ENST00000548650 VWA2Q5GFL6 755 aa16.56■□□□□ 0.24
CHMP1A-205ENST00000548650 AMER3Q8N944 861 aa16.56■□□□□ 0.24
CHMP1A-205ENST00000548650 MCUQ8NE86 351 aa16.56■□□□□ 0.24
CHMP1A-205ENST00000548650 C8orf44Q96CB5 159 aa16.56■□□□□ 0.24
CHMP1A-205ENST00000548650 MVB12AQ96EY5 273 aa16.56■□□□□ 0.24
CHMP1A-205ENST00000548650 THOC3Q96J01 351 aaKnown RBP16.56■□□□□ 0.24
CHMP1A-205ENST00000548650 MS4A14Q96JA4 679 aa16.56■□□□□ 0.24
CHMP1A-205ENST00000548650 OR2A5Q96R48 311 aa16.56■□□□□ 0.24
CHMP1A-205ENST00000548650 EPS8L2Q9H6S3 715 aa16.56■□□□□ 0.24
CHMP1A-205ENST00000548650 ZNF160Q9HCG1 818 aa16.56■□□□□ 0.24
CHMP1A-205ENST00000548650 KLHL42Q9P2K6 505 aa16.56■□□□□ 0.24
CHMP1A-205ENST00000548650 C3orf18Q9UK00 162 aa16.56■□□□□ 0.24
CHMP1A-205ENST00000548650 CTAGE9A4FU28 777 aa16.55■□□□□ 0.24
CHMP1A-205ENST00000548650 WIPF3A6NGB9 483 aa16.55■□□□□ 0.24
CHMP1A-205ENST00000548650 SDR42E2A6NKP2 422 aa16.55■□□□□ 0.24
CHMP1A-205ENST00000548650 ZNF839A8K0R7 811 aa16.55■□□□□ 0.24
CHMP1A-205ENST00000548650 FFAR3O14843 346 aa16.55■□□□□ 0.24
CHMP1A-205ENST00000548650 GPR42O15529 346 aa16.55■□□□□ 0.24
CHMP1A-205ENST00000548650 P2RX6O15547 441 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms