RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 CATSPEREQ5SY80 951 aa27.72■■■□□ 2.03
BRF1-213ENST00000548421 ARMC6Q6NXE6 501 aa27.72■■■□□ 2.03
BRF1-213ENST00000548421 CHCHD4Q8N4Q1 142 aa27.72■■■□□ 2.03
BRF1-213ENST00000548421 FLVCR1-AS1Q8TAF5 88 aa27.72■■■□□ 2.03
BRF1-213ENST00000548421 METTL6Q8TCB7 284 aa27.72■■■□□ 2.03
BRF1-213ENST00000548421 PTCD3Q96EY7 689 aaKnown RBP27.72■■■□□ 2.03
BRF1-213ENST00000548421 OR2A14Q96R47 310 aa27.72■■■□□ 2.03
BRF1-213ENST00000548421 CCT8L2Q96SF2 557 aa27.72■■■□□ 2.03
BRF1-213ENST00000548421 RABEP2Q9H5N1 569 aa27.72■■■□□ 2.03
BRF1-213ENST00000548421 PELI2Q9HAT8 420 aa27.72■■■□□ 2.03
BRF1-213ENST00000548421 NPHS2Q9NP85 383 aa27.72■■■□□ 2.03
BRF1-213ENST00000548421 MRPS30Q9NP92 439 aaKnown RBP27.72■■■□□ 2.03
BRF1-213ENST00000548421 CDX4O14627 284 aaPredicted RBP27.71■■■□□ 2.03
BRF1-213ENST00000548421 HGSO14964 777 aaPredicted RBP27.71■■■□□ 2.03
BRF1-213ENST00000548421 FLRT2O43155 660 aa27.71■■■□□ 2.03
BRF1-213ENST00000548421 FAM107AO95990 144 aa27.71■■■□□ 2.03
BRF1-213ENST00000548421 C1GALT1C1LP0DN25 315 aa27.71■■■□□ 2.03
BRF1-213ENST00000548421 UGT2B7P16662 529 aa27.71■■■□□ 2.03
BRF1-213ENST00000548421 HNF4AP41235 474 aa27.71■■■□□ 2.03
BRF1-213ENST00000548421 YBX1P67809 324 aaKnown RBP27.71■■■□□ 2.03
BRF1-213ENST00000548421 SLC14A1Q13336 389 aa27.71■■■□□ 2.03
BRF1-213ENST00000548421 GRHL2Q6ISB3 625 aa27.71■■■□□ 2.03
BRF1-213ENST00000548421 ABHD11Q8NFV4 315 aa27.71■■■□□ 2.03
BRF1-213ENST00000548421 EFCAB11Q9BUY7 163 aa27.71■■■□□ 2.03
BRF1-213ENST00000548421 SLC29A3Q9BZD2 475 aa27.71■■■□□ 2.03
BRF1-213ENST00000548421 EPB41L1Q9H4G0 881 aa27.71■■■□□ 2.03
BRF1-213ENST00000548421 CUEDC1Q9NWM3 386 aaPredicted RBP27.71■■■□□ 2.03
BRF1-213ENST00000548421 VTI1BQ9UEU0 232 aa27.71■■■□□ 2.03
BRF1-213ENST00000548421 JUPP14923 745 aa27.7■■■□□ 2.03
BRF1-213ENST00000548421 VARSP26640 1264 aaKnown RBP27.7■■■□□ 2.03
BRF1-213ENST00000548421 ALDH4A1P30038 563 aa27.7■■■□□ 2.03
BRF1-213ENST00000548421 HMOX2P30519 316 aa27.7■■■□□ 2.03
BRF1-213ENST00000548421 PROX2Q3B8N5 592 aa27.7■■■□□ 2.03
BRF1-213ENST00000548421 SPESP1Q6UW49 350 aa27.7■■■□□ 2.03
BRF1-213ENST00000548421 HOMEZQ8IX15 550 aa27.7■■■□□ 2.03
BRF1-213ENST00000548421 CCDC74AQ96AQ1 378 aa27.7■■■□□ 2.03
BRF1-213ENST00000548421 SIKE1Q9BRV8 207 aa27.7■■■□□ 2.03
BRF1-213ENST00000548421 TMEM9BQ9NQ34 198 aa27.7■■■□□ 2.03
BRF1-213ENST00000548421 BTBD3Q9Y2F9 522 aa27.7■■■□□ 2.03
BRF1-213ENST00000548421 TIMM22Q9Y584 194 aa27.7■■■□□ 2.03
BRF1-213ENST00000548421 USH1CQ9Y6N9 552 aa27.7■■■□□ 2.03
BRF1-213ENST00000548421 KCNE1BA0A087WTH5 132 aa27.7■■■□□ 2.02
BRF1-213ENST00000548421 HDAC3O15379 428 aa27.7■■■□□ 2.02
BRF1-213ENST00000548421 FKBP9O95302 570 aa27.7■■■□□ 2.02
BRF1-213ENST00000548421 CD22P20273 847 aa27.7■■■□□ 2.02
BRF1-213ENST00000548421 CCR8P51685 355 aa27.7■■■□□ 2.02
BRF1-213ENST00000548421 SLC5A12Q1EHB4 618 aa27.7■■■□□ 2.02
BRF1-213ENST00000548421 UGT3A2Q3SY77 523 aa27.7■■■□□ 2.02
BRF1-213ENST00000548421 PAGE2BQ5JRK9 111 aa27.7■■■□□ 2.02
BRF1-213ENST00000548421 GUSBP11Q6P575 273 aa27.7■■■□□ 2.02
BRF1-213ENST00000548421 EFL1Q7Z2Z2 1120 aaKnown RBP27.7■■■□□ 2.02
BRF1-213ENST00000548421 NAT6Q93015 286 aa27.7■■■□□ 2.02
BRF1-213ENST00000548421 THOC1Q96FV9 657 aaKnown RBP27.7■■■□□ 2.02
BRF1-213ENST00000548421 PARD6AQ9NPB6 346 aa27.7■■■□□ 2.02
BRF1-213ENST00000548421 EVA1BQ9NVM1 165 aa27.7■■■□□ 2.02
BRF1-213ENST00000548421 DNAJC15Q9Y5T4 150 aa27.7■■■□□ 2.02
BRF1-213ENST00000548421 COL5A1P20908 1838 aaPredicted RBP27.69■■■□□ 2.02
BRF1-213ENST00000548421 EME2A4GXA9 379 aaPredicted RBP27.69■■■□□ 2.02
BRF1-213ENST00000548421 ZW10O43264 779 aa27.69■■■□□ 2.02
BRF1-213ENST00000548421 CHEK2O96017 543 aa27.69■■■□□ 2.02
BRF1-213ENST00000548421 CKMT1AP12532 417 aa27.69■■■□□ 2.02
BRF1-213ENST00000548421 HRH2P25021 359 aa27.69■■■□□ 2.02
BRF1-213ENST00000548421 SERPINB3P29508 390 aa27.69■■■□□ 2.02
BRF1-213ENST00000548421 PPM1FP49593 454 aaPredicted RBP27.69■■■□□ 2.02
BRF1-213ENST00000548421 OR1D5P58170 312 aa27.69■■■□□ 2.02
BRF1-213ENST00000548421 GPLD1P80108 840 aa27.69■■■□□ 2.02
BRF1-213ENST00000548421 LAPTM5Q13571 262 aa27.69■■■□□ 2.02
BRF1-213ENST00000548421 SLBPQ14493 270 aaKnown RBP eCLIP27.69■■■□□ 2.02
BRF1-213ENST00000548421 CPSF6Q16630 551 aaKnown RBP eCLIP27.69■■■□□ 2.02
BRF1-213ENST00000548421 AHCYL2Q96HN2 611 aaKnown RBP27.69■■■□□ 2.02
BRF1-213ENST00000548421 ELAC2Q9BQ52 826 aaKnown RBP27.69■■■□□ 2.02
BRF1-213ENST00000548421 SLC6A20Q9NP91 592 aa27.69■■■□□ 2.02
BRF1-213ENST00000548421 RXFP3Q9NSD7 469 aa27.69■■■□□ 2.02
BRF1-213ENST00000548421 GEMIN8Q9NWZ8 242 aaKnown RBP27.69■■■□□ 2.02
BRF1-213ENST00000548421 KLHL14Q9P2G3 628 aa27.69■■■□□ 2.02
BRF1-213ENST00000548421 POMT2Q9UKY4 750 aa27.69■■■□□ 2.02
BRF1-213ENST00000548421 IGHV1OR21-1A0A087WYE8 117 aa27.68■■■□□ 2.02
BRF1-213ENST00000548421 IGKV1-8A0A0C4DH67 115 aa27.68■■■□□ 2.02
BRF1-213ENST00000548421 CPED1A4D0V7 1026 aa27.68■■■□□ 2.02
BRF1-213ENST00000548421 H7BY64 318 aa27.68■■■□□ 2.02
BRF1-213ENST00000548421 ALOX15P16050 662 aaPredicted RBP27.68■■■□□ 2.02
BRF1-213ENST00000548421 DUSP3P51452 185 aaPredicted RBP27.68■■■□□ 2.02
BRF1-213ENST00000548421 DAB2P98082 770 aa27.68■■■□□ 2.02
BRF1-213ENST00000548421 PDCD2Q16342 344 aaPredicted RBP27.68■■■□□ 2.02
BRF1-213ENST00000548421 KIAA1614Q5VZ46 1190 aa27.68■■■□□ 2.02
BRF1-213ENST00000548421 FAM219BQ5XKK7 198 aa27.68■■■□□ 2.02
BRF1-213ENST00000548421 PRR23CQ6ZRP0 262 aa27.68■■■□□ 2.02
BRF1-213ENST00000548421 FAM129CQ86XR2 697 aa27.68■■■□□ 2.02
BRF1-213ENST00000548421 FAM20CQ8IXL6 584 aa27.68■■■□□ 2.02
BRF1-213ENST00000548421 TWIST2Q8WVJ9 160 aa27.68■■■□□ 2.02
BRF1-213ENST00000548421 PRAP1Q96NZ9 151 aa27.68■■■□□ 2.02
BRF1-213ENST00000548421 RP1P56715 2156 aa27.68■■■□□ 2.02
BRF1-213ENST00000548421 FFAR3O14843 346 aa27.67■■■□□ 2.02
BRF1-213ENST00000548421 GPR42O15529 346 aa27.67■■■□□ 2.02
BRF1-213ENST00000548421 DUX1O43812 170 aa27.67■■■□□ 2.02
BRF1-213ENST00000548421 SKAP2O75563 359 aaPredicted RBP27.67■■■□□ 2.02
BRF1-213ENST00000548421 CXCR2P25025 360 aa27.67■■■□□ 2.02
BRF1-213ENST00000548421 ZRSR2Q15696 482 aaKnown RBP27.67■■■□□ 2.02
BRF1-213ENST00000548421 SPATA21Q7Z572 469 aa27.67■■■□□ 2.02
BRF1-213ENST00000548421 SPRED1Q7Z699 444 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms