RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 DCUN1D3Q8IWE4 304 aa20.22■□□□□ 0.83
RITA1-201ENST00000548278 DNAJB8Q8NHS0 232 aa20.22■□□□□ 0.83
RITA1-201ENST00000548278 GATA6Q92908 595 aa20.22■□□□□ 0.83
RITA1-201ENST00000548278 ZNF583Q96ND8 569 aa20.22■□□□□ 0.83
RITA1-201ENST00000548278 IL17FQ96PD4 163 aa20.22■□□□□ 0.83
RITA1-201ENST00000548278 NR1H4Q96RI1 486 aaPredicted RBP20.22■□□□□ 0.83
RITA1-201ENST00000548278 OSBPL6Q9BZF3 934 aa20.22■□□□□ 0.83
RITA1-201ENST00000548278 PAIP1Q9H074 479 aaKnown RBP20.22■□□□□ 0.83
RITA1-201ENST00000548278 KCNH6Q9H252 994 aa20.22■□□□□ 0.83
RITA1-201ENST00000548278 SEMA6AQ9H2E6 1030 aa20.22■□□□□ 0.83
RITA1-201ENST00000548278 IKZF5Q9H5V7 419 aa20.22■□□□□ 0.83
RITA1-201ENST00000548278 FBRSQ9HAH7 460 aa20.22■□□□□ 0.83
RITA1-201ENST00000548278 CCDC177Q9NQR7 707 aaPredicted RBP20.22■□□□□ 0.83
RITA1-201ENST00000548278 SLC6A13Q9NSD5 602 aa20.22■□□□□ 0.83
RITA1-201ENST00000548278 GEMIN8Q9NWZ8 242 aaKnown RBP20.22■□□□□ 0.83
RITA1-201ENST00000548278 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.22■□□□□ 0.83
RITA1-201ENST00000548278 COL4A2P08572 1712 aa20.21■□□□□ 0.83
RITA1-201ENST00000548278 KLF8O95600 359 aaPredicted RBP20.21■□□□□ 0.83
RITA1-201ENST00000548278 DNTTP04053 509 aa20.21■□□□□ 0.83
RITA1-201ENST00000548278 FUCA1P04066 466 aa20.21■□□□□ 0.83
RITA1-201ENST00000548278 GPIP06744 558 aa20.21■□□□□ 0.83
RITA1-201ENST00000548278 C1GALT1C1LP0DN25 315 aa20.21■□□□□ 0.83
RITA1-201ENST00000548278 PRPS1L1P21108 318 aa20.21■□□□□ 0.83
RITA1-201ENST00000548278 PSMA4P25789 261 aaKnown RBP20.21■□□□□ 0.83
RITA1-201ENST00000548278 BMP8BP34820 402 aa20.21■□□□□ 0.83
RITA1-201ENST00000548278 ACSM2AQ08AH3 577 aa20.21■□□□□ 0.83
RITA1-201ENST00000548278 LRIF1Q5T3J3 769 aa20.21■□□□□ 0.83
RITA1-201ENST00000548278 ACSM2BQ68CK6 577 aa20.21■□□□□ 0.83
RITA1-201ENST00000548278 ERMP1Q7Z2K6 904 aa20.21■□□□□ 0.83
RITA1-201ENST00000548278 SLC5A11Q8WWX8 675 aa20.21■□□□□ 0.83
RITA1-201ENST00000548278 EFCAB11Q9BUY7 163 aa20.21■□□□□ 0.83
RITA1-201ENST00000548278 RPF2Q9H7B2 306 aaKnown RBP20.21■□□□□ 0.83
RITA1-201ENST00000548278 YY1AP1Q9H869 796 aa20.21■□□□□ 0.83
RITA1-201ENST00000548278 PHPT1Q9NRX4 125 aaPredicted RBP20.21■□□□□ 0.83
RITA1-201ENST00000548278 PLAGL1Q9UM63 463 aa20.21■□□□□ 0.83
RITA1-201ENST00000548278 AURKCQ9UQB9 309 aa20.21■□□□□ 0.83
RITA1-201ENST00000548278 A0A096LPI6 279 aa20.2■□□□□ 0.82
RITA1-201ENST00000548278 RNGTTO60942 597 aaKnown RBP20.2■□□□□ 0.82
RITA1-201ENST00000548278 ERN1O75460 977 aaKnown RBP20.2■□□□□ 0.82
RITA1-201ENST00000548278 HOXB2P14652 356 aa20.2■□□□□ 0.82
RITA1-201ENST00000548278 ADPRHP54922 357 aa20.2■□□□□ 0.82
RITA1-201ENST00000548278 CYP4F3Q08477 520 aa20.2■□□□□ 0.82
RITA1-201ENST00000548278 MTAPQ13126 283 aa20.2■□□□□ 0.82
RITA1-201ENST00000548278 SLBPQ14493 270 aaKnown RBP eCLIP20.2■□□□□ 0.82
RITA1-201ENST00000548278 COL19A1Q14993 1142 aa20.2■□□□□ 0.82
RITA1-201ENST00000548278 TBCELQ5QJ74 424 aa20.2■□□□□ 0.82
RITA1-201ENST00000548278 NXPE4Q6UWF7 544 aa20.2■□□□□ 0.82
RITA1-201ENST00000548278 DNAJC14Q6Y2X3 702 aaPredicted RBP20.2■□□□□ 0.82
RITA1-201ENST00000548278 AMIGO2Q86SJ2 522 aa20.2■□□□□ 0.82
RITA1-201ENST00000548278 SYT12Q8IV01 421 aa20.2■□□□□ 0.82
RITA1-201ENST00000548278 LAS2Q8IYD9 372 aa20.2■□□□□ 0.82
RITA1-201ENST00000548278 OR5K2Q8NHB8 316 aa20.2■□□□□ 0.82
RITA1-201ENST00000548278 SETD7Q8WTS6 366 aaKnown RBP20.2■□□□□ 0.82
RITA1-201ENST00000548278 CHTF18Q8WVB6 975 aa20.2■□□□□ 0.82
RITA1-201ENST00000548278 GFM2Q969S9 779 aaKnown RBP20.2■□□□□ 0.82
RITA1-201ENST00000548278 REPS1Q96D71 796 aa20.2■□□□□ 0.82
RITA1-201ENST00000548278 ABHD8Q96I13 439 aa20.2■□□□□ 0.82
RITA1-201ENST00000548278 SLC17A9Q9BYT1 436 aa20.2■□□□□ 0.82
RITA1-201ENST00000548278 CNOT11Q9UKZ1 510 aaKnown RBP20.2■□□□□ 0.82
RITA1-201ENST00000548278 PCDHB14Q9Y5E9 798 aa20.2■□□□□ 0.82
RITA1-201ENST00000548278 CCDC85CA6NKD9 419 aa20.2■□□□□ 0.82
RITA1-201ENST00000548278 PI15O43692 258 aa20.2■□□□□ 0.82
RITA1-201ENST00000548278 PRMT3O60678 531 aa20.2■□□□□ 0.82
RITA1-201ENST00000548278 ERGP11308 486 aa20.2■□□□□ 0.82
RITA1-201ENST00000548278 MYCLP1P12525 358 aaPredicted RBP20.2■□□□□ 0.82
RITA1-201ENST00000548278 ZNF26P17031 533 aaPredicted RBP20.2■□□□□ 0.82
RITA1-201ENST00000548278 HOXB9P17482 250 aaPredicted RBP20.2■□□□□ 0.82
RITA1-201ENST00000548278 PTPN6P29350 595 aa20.2■□□□□ 0.82
RITA1-201ENST00000548278 C21orf58P58505 322 aa20.2■□□□□ 0.82
RITA1-201ENST00000548278 RAE1P78406 368 aaKnown RBP20.2■□□□□ 0.82
RITA1-201ENST00000548278 SF1Q15637 639 aaKnown RBP20.2■□□□□ 0.82
RITA1-201ENST00000548278 CYP51A1Q16850 503 aa20.2■□□□□ 0.82
RITA1-201ENST00000548278 PGS1Q32NB8 556 aa20.2■□□□□ 0.82
RITA1-201ENST00000548278 GTDC1Q4AE62 458 aa20.2■□□□□ 0.82
RITA1-201ENST00000548278 MTX3Q5HYI7 312 aa20.2■□□□□ 0.82
RITA1-201ENST00000548278 MSANTD1Q6ZTZ1 278 aa20.2■□□□□ 0.82
RITA1-201ENST00000548278 DTWD1Q8N5C7 304 aa20.2■□□□□ 0.82
RITA1-201ENST00000548278 ITCHQ96J02 903 aa20.2■□□□□ 0.82
RITA1-201ENST00000548278 INPP5KQ9BT40 448 aa20.2■□□□□ 0.82
RITA1-201ENST00000548278 RMND5AQ9H871 391 aa20.2■□□□□ 0.82
RITA1-201ENST00000548278 MAGEL2Q9UJ55 1249 aa20.2■□□□□ 0.82
RITA1-201ENST00000548278 MTCH2Q9Y6C9 303 aa20.2■□□□□ 0.82
RITA1-201ENST00000548278 PIPSLA2A3N6 862 aa20.19■□□□□ 0.82
RITA1-201ENST00000548278 KLHL33A6NCF5 533 aa20.19■□□□□ 0.82
RITA1-201ENST00000548278 HNRNPRO43390 633 aaKnown RBP20.19■□□□□ 0.82
RITA1-201ENST00000548278 B3GALT4O96024 378 aa20.19■□□□□ 0.82
RITA1-201ENST00000548278 IL10P22301 178 aa20.19■□□□□ 0.82
RITA1-201ENST00000548278 RPS13P62277 151 aaKnown RBP20.19■□□□□ 0.82
RITA1-201ENST00000548278 MRPS35P82673 323 aaKnown RBP20.19■□□□□ 0.82
RITA1-201ENST00000548278 FOLH1Q04609 750 aa20.19■□□□□ 0.82
RITA1-201ENST00000548278 PAGE2BQ5JRK9 111 aa20.19■□□□□ 0.82
RITA1-201ENST00000548278 C10orf62Q5T681 223 aaPredicted RBP20.19■□□□□ 0.82
RITA1-201ENST00000548278 GLYATQ6IB77 296 aa20.19■□□□□ 0.82
RITA1-201ENST00000548278 C1orf52Q8N6N3 182 aaKnown RBP20.19■□□□□ 0.82
RITA1-201ENST00000548278 EME1Q96AY2 570 aa20.19■□□□□ 0.82
RITA1-201ENST00000548278 PPWD1Q96BP3 646 aaKnown RBP20.19■□□□□ 0.82
RITA1-201ENST00000548278 SH3GL1Q99961 368 aa20.19■□□□□ 0.82
RITA1-201ENST00000548278 THUMPD3Q9BV44 507 aaKnown RBP20.19■□□□□ 0.82
RITA1-201ENST00000548278 TDRKHQ9Y2W6 561 aaKnown RBP20.19■□□□□ 0.82
RITA1-201ENST00000548278 CFAP20Q9Y6A4 193 aaKnown RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms