RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 CATSPERZQ9NTU4 200 aa11.38□□□□□ -0.59
TRAFD1-205ENST00000548277 SUCOQ9UBS9 1254 aaKnown RBP11.38□□□□□ -0.59
TRAFD1-205ENST00000548277 SEC14L3Q9UDX4 400 aa11.38□□□□□ -0.59
TRAFD1-205ENST00000548277 A0A1W2PPV9 198 aa11.37□□□□□ -0.59
TRAFD1-205ENST00000548277 A8MUI8 341 aa11.37□□□□□ -0.59
TRAFD1-205ENST00000548277 PRMT5O14744 637 aaPredicted RBP11.37□□□□□ -0.59
TRAFD1-205ENST00000548277 CD3EAPO15446 510 aaKnown RBP11.37□□□□□ -0.59
TRAFD1-205ENST00000548277 ZNF189O75820 626 aaPredicted RBP11.37□□□□□ -0.59
TRAFD1-205ENST00000548277 USP1O94782 785 aa11.37□□□□□ -0.59
TRAFD1-205ENST00000548277 RASAL1O95294 804 aa11.37□□□□□ -0.59
TRAFD1-205ENST00000548277 EIF3BP55884 814 aaKnown RBP11.37□□□□□ -0.59
TRAFD1-205ENST00000548277 SESN2P58004 480 aaPredicted RBP11.37□□□□□ -0.59
TRAFD1-205ENST00000548277 CRADDP78560 199 aa11.37□□□□□ -0.59
TRAFD1-205ENST00000548277 MAT1AQ00266 395 aaKnown RBP11.37□□□□□ -0.59
TRAFD1-205ENST00000548277 KLF1Q13351 362 aaPredicted RBP11.37□□□□□ -0.59
TRAFD1-205ENST00000548277 KCTD19Q17RG1 926 aaPredicted RBP11.37□□□□□ -0.59
TRAFD1-205ENST00000548277 MUM1Q2TAK8 710 aa11.37□□□□□ -0.59
TRAFD1-205ENST00000548277 HKDC1Q2TB90 917 aa11.37□□□□□ -0.59
TRAFD1-205ENST00000548277 PRMT9Q6P2P2 845 aa11.37□□□□□ -0.59
TRAFD1-205ENST00000548277 LRRC8BQ6P9F7 803 aa11.37□□□□□ -0.59
TRAFD1-205ENST00000548277 OTOAQ7RTW8 1153 aa11.37□□□□□ -0.59
TRAFD1-205ENST00000548277 SPNS2Q8IVW8 549 aa11.37□□□□□ -0.59
TRAFD1-205ENST00000548277 OR2A1Q8NGT9 310 aa11.37□□□□□ -0.59
TRAFD1-205ENST00000548277 SLC35B2Q8TB61 432 aa11.37□□□□□ -0.59
TRAFD1-205ENST00000548277 C10orf90Q96M02 699 aa11.37□□□□□ -0.59
TRAFD1-205ENST00000548277 STMN3Q9NZ72 180 aa11.37□□□□□ -0.59
TRAFD1-205ENST00000548277 MRPS2Q9Y399 296 aaKnown RBP11.37□□□□□ -0.59
TRAFD1-205ENST00000548277 TCAF1Q9Y4C2 921 aa11.37□□□□□ -0.59
TRAFD1-205ENST00000548277 NCOA6Q14686 2063 aaPredicted RBP11.37□□□□□ -0.59
TRAFD1-205ENST00000548277 IGHV1-45A0A0A0MS14 117 aa11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 A0A0A6YYC8 382 aaPredicted RBP11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 IGHV3-20A0A0C4DH32 117 aa11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 FAM227AF5H4B4 570 aa11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 I3L1I5 382 aaPredicted RBP11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 ZNHIT1O43257 154 aa11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 NDUFS3O75489 264 aa11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 BMP10O95393 424 aa11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 SERPINA7P05543 415 aa11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 ANXA5P08758 320 aa11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 COX6B1P14854 86 aa11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 CMPK1P30085 196 aa11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 CDC25BP30305 580 aa11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 FMO4P31512 558 aa11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 SOX11P35716 441 aa11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 TERF1P54274 439 aa11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 ZNF33BQ06732 778 aa11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 ART3Q13508 389 aa11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 MFSD4BQ5TF39 518 aa11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 FCRLBQ6BAA4 426 aa11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 HIBCHQ6NVY1 386 aaPredicted RBP11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 CES3Q6UWW8 571 aa11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 RNF44Q7L0R7 432 aa11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 SHISA5Q8N114 240 aa11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 PPFIBP2Q8ND30 876 aa11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 PPHLN1Q8NEY8 458 aaKnown RBP11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 SUN3Q8TAQ9 357 aa11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 C1orf54Q8WWF1 131 aa11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 HES6Q96HZ4 224 aa11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 FOPNLQ96NB1 174 aa11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 PANX3Q96QZ0 392 aa11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 ZFYVE21Q9BQ24 234 aa11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 TRIM56Q9BRZ2 755 aaKnown RBP11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 RAB11FIP5Q9BXF6 653 aa11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 SYNPO2LQ9H987 977 aa11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 MRPS30Q9NP92 439 aaKnown RBP11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 RAB6BQ9NRW1 208 aa11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 GNPTGQ9UJJ9 305 aa11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 MKL2Q9ULH7 1088 aa11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 CDC14AQ9UNH5 594 aa11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 ZNF148Q9UQR1 794 aa11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 RUVBL1Q9Y265 456 aaKnown RBP11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 CAPN6Q9Y6Q1 641 aa11.36□□□□□ -0.59
TRAFD1-205ENST00000548277 OR2W5A6NFC9 320 aa11.35□□□□□ -0.59
TRAFD1-205ENST00000548277 GOLGA8KD6RF30 607 aa11.35□□□□□ -0.59
TRAFD1-205ENST00000548277 GOLGA8TH3BQL2 631 aa11.35□□□□□ -0.59
TRAFD1-205ENST00000548277 NIPSNAP2O75323 286 aa11.35□□□□□ -0.59
TRAFD1-205ENST00000548277 CRYABP02511 175 aaKnown RBP11.35□□□□□ -0.59
TRAFD1-205ENST00000548277 APRTP07741 180 aa11.35□□□□□ -0.59
TRAFD1-205ENST00000548277 ZSCAN5DPP0CG00 497 aa11.35□□□□□ -0.59
TRAFD1-205ENST00000548277 ESRRAP11474 423 aaPredicted RBP11.35□□□□□ -0.59
TRAFD1-205ENST00000548277 NMBRP28336 390 aa11.35□□□□□ -0.59
TRAFD1-205ENST00000548277 RPA3P35244 121 aaPredicted RBP11.35□□□□□ -0.59
TRAFD1-205ENST00000548277 FDFT1P37268 417 aa11.35□□□□□ -0.59
TRAFD1-205ENST00000548277 TTPAP49638 278 aa11.35□□□□□ -0.59
TRAFD1-205ENST00000548277 PRTGQ2VWP7 1150 aa11.35□□□□□ -0.59
TRAFD1-205ENST00000548277 AARS2Q5JTZ9 985 aaKnown RBP11.35□□□□□ -0.59
TRAFD1-205ENST00000548277 ABHD17BQ5VST6 288 aa11.35□□□□□ -0.59
TRAFD1-205ENST00000548277 NEK10Q6ZWH5 1172 aa11.35□□□□□ -0.59
TRAFD1-205ENST00000548277 GDF7Q7Z4P5 450 aa11.35□□□□□ -0.59
TRAFD1-205ENST00000548277 ADCK2Q7Z695 626 aa11.35□□□□□ -0.59
TRAFD1-205ENST00000548277 PLD3Q8IV08 490 aa11.35□□□□□ -0.59
TRAFD1-205ENST00000548277 RNF10Q8N5U6 811 aaKnown RBP11.35□□□□□ -0.59
TRAFD1-205ENST00000548277 CSNK1A1LQ8N752 337 aa11.35□□□□□ -0.59
TRAFD1-205ENST00000548277 LURAP1Q96LR2 239 aa11.35□□□□□ -0.59
TRAFD1-205ENST00000548277 TSPAN10Q9H1Z9 355 aaPredicted RBP11.35□□□□□ -0.59
TRAFD1-205ENST00000548277 P2RY12Q9H244 342 aa11.35□□□□□ -0.59
TRAFD1-205ENST00000548277 GALPQ9UBC7 116 aa11.35□□□□□ -0.59
TRAFD1-205ENST00000548277 GUCA1BQ9UMX6 200 aa11.35□□□□□ -0.59
TRAFD1-205ENST00000548277 IGLV3-12A0A075B6K2 115 aa11.34□□□□□ -0.59
TRAFD1-205ENST00000548277 OR2A25A4D2G3 310 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms