RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 ZNF304Q9HCX3 659 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 FBXO6Q9NRD1 293 aaPredicted RBP6.41□□□□□ -1.38
SCAF11-211ENST00000547950 FAM114A2Q9NRY5 505 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 C5AR2Q9P296 337 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 CTSFQ9UBX1 484 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 FBXL4Q9UKA2 621 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 B3GNT3Q9Y2A9 372 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 JRKLQ9Y4A0 524 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 MAD1L1Q9Y6D9 718 aa6.41□□□□□ -1.38
SCAF11-211ENST00000547950 A0A1W2PPV9 198 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 FITM1A5D6W6 292 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 CLEC18AA5D8T8 446 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 ARHGEF33A8MVX0 844 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 H0YGG7 62 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 SOCS6O14544 535 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 KIF5CO60282 957 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 KLHL41O60662 606 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 SEMA7AO75326 666 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 PSIP1O75475 530 aaKnown RBP6.4□□□□□ -1.38
SCAF11-211ENST00000547950 USP1O94782 785 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 IPO13O94829 963 aaKnown RBP6.4□□□□□ -1.38
SCAF11-211ENST00000547950 HAUS5O94927 633 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 FKBP9O95302 570 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 MED26O95402 600 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 CATP04040 527 aaKnown RBP6.4□□□□□ -1.38
SCAF11-211ENST00000547950 ERVK-10P10266 1014 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 MLNP12872 115 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 MMP11P24347 488 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 ATP5DP30049 168 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 HSD17B2P37059 387 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 MAGEA6P43360 314 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 CLCN7P51798 805 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 PNLIPRP1P54315 467 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 ADARP55265 1226 aaKnown RBP6.4□□□□□ -1.38
SCAF11-211ENST00000547950 ARF3P61204 181 aaPredicted RBP6.4□□□□□ -1.38
SCAF11-211ENST00000547950 OCA2Q04671 838 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 AIMP2Q13155 320 aaKnown RBP6.4□□□□□ -1.38
SCAF11-211ENST00000547950 MRPL49Q13405 166 aaKnown RBP6.4□□□□□ -1.38
SCAF11-211ENST00000547950 CUL1Q13616 776 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 RBBP7Q16576 425 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 TTLL9Q3SXZ7 439 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 THEMIS2Q5TEJ8 643 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 IRAK1BP1Q5VVH5 260 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 PRAMEF13Q5VWM6 474 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 ZNF549Q6P9A3 640 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 KIRREL2Q6UWL6 708 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 CLEC18BQ6UXF7 455 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 COX15Q7KZN9 410 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 ADCK2Q7Z695 626 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 REXO1L1PQ8IX06 675 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 IQCKQ8N0W5 287 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 RASGEF1CQ8N431 466 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 TMEM151AQ8N4L1 468 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 CLEC18CQ8NCF0 446 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 PPFIBP2Q8ND30 876 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 MCUQ8NE86 351 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 HMGCLL1Q8TB92 370 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 COG1Q8WTW3 980 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 SMPDL3AQ92484 453 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 TM9SF4Q92544 642 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 FKBP10Q96AY3 582 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 SNRNP40Q96DI7 357 aaKnown RBP6.4□□□□□ -1.38
SCAF11-211ENST00000547950 CABS1Q96KC9 395 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 ZNF285Q96NJ3 590 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 SERPINB12Q96P63 405 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 PSMG3-AS1Q96PY0 264 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 NAP1L3Q99457 506 aaPredicted RBP6.4□□□□□ -1.38
SCAF11-211ENST00000547950 PKP4Q99569 1192 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 SLC30A3Q99726 388 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 ZFYVE21Q9BQ24 234 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 CRB3Q9BUF7 120 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 WDR54Q9H977 334 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 XAB2Q9HCS7 855 aaKnown RBP6.4□□□□□ -1.38
SCAF11-211ENST00000547950 SLC6A20Q9NP91 592 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 MRPS30Q9NP92 439 aaKnown RBP6.4□□□□□ -1.38
SCAF11-211ENST00000547950 C20orf96Q9NUD7 363 aaPredicted RBP6.4□□□□□ -1.38
SCAF11-211ENST00000547950 ASF1BQ9NVP2 202 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 INTS10Q9NVR2 710 aaKnown RBP6.4□□□□□ -1.38
SCAF11-211ENST00000547950 SPATA7Q9P0W8 599 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 TAC3Q9UHF0 121 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 HS3ST3B1Q9Y662 390 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 COPG1Q9Y678 874 aaKnown RBP6.4□□□□□ -1.38
SCAF11-211ENST00000547950 FAM169AQ9Y6X4 670 aa6.4□□□□□ -1.38
SCAF11-211ENST00000547950 FLNCQ14315 2725 aa6.4□□□□□ -1.39
SCAF11-211ENST00000547950 IGKV1-8A0A0C4DH67 115 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 LOC100996750A0A140TA64 210 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 ZCWPW2A0A1B0GU75 182 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 OR2A25A4D2G3 310 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 VSTM2BA6NLU5 285 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 MYO1CO00159 1063 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 PGRMC1O00264 195 aaKnown RBP6.39□□□□□ -1.39
SCAF11-211ENST00000547950 FFAR3O14843 346 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 GPR42O15529 346 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 ZBTB14O43829 449 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 VPS26AO75436 327 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 SLC16A8O95907 504 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 ONECUT2O95948 504 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 STATHP02808 62 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 ZGLP1P0C6A0 271 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 GP1BBP13224 206 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms