RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 ROPN1Q9HAT0 212 aaPredicted RBP13.89□□□□□ -0.19
DDX54-203ENST00000546869 SLC6A20Q9NP91 592 aa13.89□□□□□ -0.19
DDX54-203ENST00000546869 RNF112Q9ULX5 631 aa13.89□□□□□ -0.19
DDX54-203ENST00000546869 KLHL20Q9Y2M5 609 aa13.89□□□□□ -0.19
DDX54-203ENST00000546869 RAXQ9Y2V3 346 aa13.89□□□□□ -0.19
DDX54-203ENST00000546869 KCNE1BA0A087WTH5 132 aa13.88□□□□□ -0.19
DDX54-203ENST00000546869 FITM1A5D6W6 292 aa13.88□□□□□ -0.19
DDX54-203ENST00000546869 E7EQ34 232 aa13.88□□□□□ -0.19
DDX54-203ENST00000546869 HCRTR1O43613 425 aa13.88□□□□□ -0.19
DDX54-203ENST00000546869 KLK8O60259 260 aa13.88□□□□□ -0.19
DDX54-203ENST00000546869 CTSVO60911 334 aa13.88□□□□□ -0.19
DDX54-203ENST00000546869 CDH16O75309 829 aa13.88□□□□□ -0.19
DDX54-203ENST00000546869 SCRG1O75711 98 aa13.88□□□□□ -0.19
DDX54-203ENST00000546869 GCGRP47871 477 aa13.88□□□□□ -0.19
DDX54-203ENST00000546869 YBX1P67809 324 aaKnown RBP13.88□□□□□ -0.19
DDX54-203ENST00000546869 CLN3Q13286 438 aa13.88□□□□□ -0.19
DDX54-203ENST00000546869 TSTA3Q13630 321 aaPredicted RBP13.88□□□□□ -0.19
DDX54-203ENST00000546869 YOD1Q5VVQ6 348 aaPredicted RBP13.88□□□□□ -0.19
DDX54-203ENST00000546869 METTL2BQ6P1Q9 378 aaKnown RBP13.88□□□□□ -0.19
DDX54-203ENST00000546869 ZNF517Q6ZMY9 492 aaPredicted RBP13.88□□□□□ -0.19
DDX54-203ENST00000546869 LRRC69Q6ZNQ3 347 aa13.88□□□□□ -0.19
DDX54-203ENST00000546869 THOC6Q86W42 341 aaKnown RBP13.88□□□□□ -0.19
DDX54-203ENST00000546869 C17orf64Q86WR6 236 aa13.88□□□□□ -0.19
DDX54-203ENST00000546869 GPR135Q8IZ08 494 aa13.88□□□□□ -0.19
DDX54-203ENST00000546869 NLGN4XQ8N0W4 816 aa13.88□□□□□ -0.19
DDX54-203ENST00000546869 ESX1Q8N693 406 aa13.88□□□□□ -0.19
DDX54-203ENST00000546869 NLGN4YQ8NFZ3 816 aaPredicted RBP13.88□□□□□ -0.19
DDX54-203ENST00000546869 N4BP2L2Q92802 583 aaPredicted RBP13.88□□□□□ -0.19
DDX54-203ENST00000546869 NKD1Q969G9 470 aa13.88□□□□□ -0.19
DDX54-203ENST00000546869 THAP11Q96EK4 314 aa13.88□□□□□ -0.19
DDX54-203ENST00000546869 OR4K3Q96R72 315 aa13.88□□□□□ -0.19
DDX54-203ENST00000546869 ZFYVE21Q9BQ24 234 aa13.88□□□□□ -0.19
DDX54-203ENST00000546869 UNKQ9C0B0 810 aaKnown RBP13.88□□□□□ -0.19
DDX54-203ENST00000546869 VPS11Q9H270 941 aa13.88□□□□□ -0.19
DDX54-203ENST00000546869 ALG9Q9H6U8 611 aa13.88□□□□□ -0.19
DDX54-203ENST00000546869 NUDT4Q9NZJ9 180 aa13.88□□□□□ -0.19
DDX54-203ENST00000546869 KCNE2Q9Y6J6 123 aa13.88□□□□□ -0.19
DDX54-203ENST00000546869 TPRP12270 2363 aaKnown RBP13.88□□□□□ -0.19
DDX54-203ENST00000546869 SRRM3A6NNA2 597 aaPredicted RBP13.87□□□□□ -0.19
DDX54-203ENST00000546869 H7BY64 318 aa13.87□□□□□ -0.19
DDX54-203ENST00000546869 MAP2K7O14733 419 aa13.87□□□□□ -0.19
DDX54-203ENST00000546869 TAPBPO15533 448 aa13.87□□□□□ -0.19
DDX54-203ENST00000546869 RAD1O60671 282 aa13.87□□□□□ -0.19
DDX54-203ENST00000546869 CPNE3O75131 537 aaKnown RBP13.87□□□□□ -0.19
DDX54-203ENST00000546869 STK16O75716 305 aa13.87□□□□□ -0.19
DDX54-203ENST00000546869 OR2B3O76000 313 aa13.87□□□□□ -0.19
DDX54-203ENST00000546869 KIAA0754O94854 1291 aa13.87□□□□□ -0.19
DDX54-203ENST00000546869 TIAF1O95411 115 aa13.87□□□□□ -0.19
DDX54-203ENST00000546869 MTHFD2P13995 350 aa13.87□□□□□ -0.19
DDX54-203ENST00000546869 ZNF28P17035 718 aa13.87□□□□□ -0.19
DDX54-203ENST00000546869 GMPRP36959 345 aa13.87□□□□□ -0.19
DDX54-203ENST00000546869 ATP1A2P50993 1020 aa13.87□□□□□ -0.19
DDX54-203ENST00000546869 EMP3P54852 163 aa13.87□□□□□ -0.19
DDX54-203ENST00000546869 PCDH1Q08174 1060 aa13.87□□□□□ -0.19
DDX54-203ENST00000546869 ABHD18Q0P651 414 aa13.87□□□□□ -0.19
DDX54-203ENST00000546869 C6orf15Q6UXA7 325 aaPredicted RBP13.87□□□□□ -0.19
DDX54-203ENST00000546869 TIPARPQ7Z3E1 657 aaKnown RBP13.87□□□□□ -0.19
DDX54-203ENST00000546869 TMEM126BQ8IUX1 230 aa13.87□□□□□ -0.19
DDX54-203ENST00000546869 PLD6Q8N2A8 252 aaKnown RBP13.87□□□□□ -0.19
DDX54-203ENST00000546869 RIBC1Q8N443 379 aaPredicted RBP13.87□□□□□ -0.19
DDX54-203ENST00000546869 UBTD2Q8WUN7 234 aa13.87□□□□□ -0.19
DDX54-203ENST00000546869 PYCR2Q96C36 320 aa13.87□□□□□ -0.19
DDX54-203ENST00000546869 PRAP1Q96NZ9 151 aa13.87□□□□□ -0.19
DDX54-203ENST00000546869 OR2A5Q96R48 311 aa13.87□□□□□ -0.19
DDX54-203ENST00000546869 DPH2Q9BQC3 489 aaPredicted RBP13.87□□□□□ -0.19
DDX54-203ENST00000546869 TMEM109Q9BVC6 243 aa13.87□□□□□ -0.19
DDX54-203ENST00000546869 GPRC5BQ9NZH0 403 aa13.87□□□□□ -0.19
DDX54-203ENST00000546869 CD274Q9NZQ7 290 aa13.87□□□□□ -0.19
DDX54-203ENST00000546869 TMCO1Q9UM00 188 aa13.87□□□□□ -0.19
DDX54-203ENST00000546869 SLC22A14Q9Y267 594 aa13.87□□□□□ -0.19
DDX54-203ENST00000546869 ADAMTS20P59510 1910 aa13.87□□□□□ -0.19
DDX54-203ENST00000546869 IGF2RP11717 2491 aa13.87□□□□□ -0.19
DDX54-203ENST00000546869 WDFY3Q8IZQ1 3526 aa13.86□□□□□ -0.19
DDX54-203ENST00000546869 APC2O95996 2303 aa13.86□□□□□ -0.19
DDX54-203ENST00000546869 ASPMQ8IZT6 3477 aa13.86□□□□□ -0.19
DDX54-203ENST00000546869 TXNDC9O14530 226 aa13.86□□□□□ -0.19
DDX54-203ENST00000546869 S100BP04271 92 aaPredicted RBP13.86□□□□□ -0.19
DDX54-203ENST00000546869 GSTA1P08263 222 aa13.86□□□□□ -0.19
DDX54-203ENST00000546869 CCNYL3P0C7X3 344 aa13.86□□□□□ -0.19
DDX54-203ENST00000546869 CCR8P51685 355 aa13.86□□□□□ -0.19
DDX54-203ENST00000546869 ARSFP54793 590 aa13.86□□□□□ -0.19
DDX54-203ENST00000546869 RPS15AP62244 130 aaKnown RBP13.86□□□□□ -0.19
DDX54-203ENST00000546869 CSNK1G2P78368 415 aa13.86□□□□□ -0.19
DDX54-203ENST00000546869 NAA30Q147X3 362 aaPredicted RBP13.86□□□□□ -0.19
DDX54-203ENST00000546869 FAM214AQ32MH5 1076 aa13.86□□□□□ -0.19
DDX54-203ENST00000546869 TECRLQ5HYJ1 363 aa13.86□□□□□ -0.19
DDX54-203ENST00000546869 RHBDD2Q6NTF9 364 aa13.86□□□□□ -0.19
DDX54-203ENST00000546869 SH2D5Q6ZV89 423 aa13.86□□□□□ -0.19
DDX54-203ENST00000546869 SPACA3Q8IXA5 215 aa13.86□□□□□ -0.19
DDX54-203ENST00000546869 CACNA2D3Q8IZS8 1091 aa13.86□□□□□ -0.19
DDX54-203ENST00000546869 TSNARE1Q96NA8 513 aa13.86□□□□□ -0.19
DDX54-203ENST00000546869 MRPL57Q9BQC6 102 aaKnown RBP13.86□□□□□ -0.19
DDX54-203ENST00000546869 SELENOSQ9BQE4 189 aa13.86□□□□□ -0.19
DDX54-203ENST00000546869 TMEM79Q9BSE2 394 aa13.86□□□□□ -0.19
DDX54-203ENST00000546869 CD244Q9BZW8 370 aa13.86□□□□□ -0.19
DDX54-203ENST00000546869 SPRTNQ9H040 489 aaPredicted RBP13.86□□□□□ -0.19
DDX54-203ENST00000546869 PELI2Q9HAT8 420 aa13.86□□□□□ -0.19
DDX54-203ENST00000546869 CUEDC1Q9NWM3 386 aaPredicted RBP13.86□□□□□ -0.19
DDX54-203ENST00000546869 PADI1Q9ULC6 663 aa13.86□□□□□ -0.19
DDX54-203ENST00000546869 SRPK3Q9UPE1 567 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms