RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 AKAP8O43823 692 aaKnown RBP12.2□□□□□ -0.46
COL4A6-209ENST00000545689 G6PDP11413 515 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 SLC6A4P31645 630 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 IRF5Q13568 498 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 UPP1Q16831 310 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 TNFAIP8L2Q6P589 184 aaPredicted RBP12.2□□□□□ -0.46
COL4A6-209ENST00000545689 NPAS3Q8IXF0 933 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 ZDHHC14Q8IZN3 488 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 MOAP1Q96BY2 351 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 COL21A1Q96P44 957 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 UCK2Q9BZX2 261 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 TRIM2Q9C040 744 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 ZCCHC3Q9NUD5 404 aaKnown RBP12.2□□□□□ -0.46
COL4A6-209ENST00000545689 COPS7AQ9UBW8 275 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 MYH2Q9UKX2 1941 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 IGKV6-21A0A0C4DH24 114 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 ACVR2AP27037 513 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 CDK6Q00534 326 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 ZNF433Q8N7K0 673 aaPredicted RBP12.2□□□□□ -0.46
COL4A6-209ENST00000545689 DENND1AQ8TEH3 1009 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 CRYGNQ8WXF5 182 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 KCNS3Q9BQ31 491 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 ZNF395Q9H8N7 513 aaPredicted RBP12.2□□□□□ -0.46
COL4A6-209ENST00000545689 SLC35C2Q9NQQ7 365 aa12.2□□□□□ -0.46
COL4A6-209ENST00000545689 CNOT11Q9UKZ1 510 aaKnown RBP12.2□□□□□ -0.46
COL4A6-209ENST00000545689 LATS1O95835 1130 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 CD1DP15813 335 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 IL12BP29460 328 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 KCNQ1P51787 676 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 PPP3R1P63098 170 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 RIPPLY1Q0D2K3 151 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 MOGQ16653 247 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 CRB2Q5IJ48 1285 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 SLC30A6Q6NXT4 461 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 HDDC3Q8N4P3 179 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 TXNDC5Q8NBS9 432 aaKnown RBP12.19□□□□□ -0.46
COL4A6-209ENST00000545689 POLMQ9NP87 494 aaPredicted RBP12.19□□□□□ -0.46
COL4A6-209ENST00000545689 SEC14L4Q9UDX3 406 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 PSAT1Q9Y617 370 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 TRBC2A0A5B9 178 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 PLA2G16P53816 162 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 PCDH1Q08174 1060 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 TMEM135Q86UB9 458 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 HDAC2Q92769 488 aaKnown RBP12.19□□□□□ -0.46
COL4A6-209ENST00000545689 KCNH6Q9H252 994 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 RPF2Q9H7B2 306 aaKnown RBP12.19□□□□□ -0.46
COL4A6-209ENST00000545689 GKN1Q9NS71 199 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 SLC22A14Q9Y267 594 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 COQ9O75208 318 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 PSIP1O75475 530 aaKnown RBP12.19□□□□□ -0.46
COL4A6-209ENST00000545689 RENP00797 406 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 PEPDP12955 493 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 HTR1EP28566 365 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 GRIA2P42262 883 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 GBX2P52951 348 aaPredicted RBP12.19□□□□□ -0.46
COL4A6-209ENST00000545689 RAB2AP61019 212 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 SFT2D3Q587I9 215 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 LIPJQ5W064 366 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 OR10H4Q8NGA5 316 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 ING5Q8WYH8 240 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 PRSS51A0A1B0GVH4 220 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 A0A1W2PRU2 124 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 CLDN7O95471 211 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 NR4A1P22736 598 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 DGKQP52824 942 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 GRSF1Q12849 480 aaKnown RBP eCLIP12.19□□□□□ -0.46
COL4A6-209ENST00000545689 ZCCHC10Q8TBK6 192 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 HSH2DQ96JZ2 352 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 LGR4Q9BXB1 951 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 SLC28A3Q9HAS3 691 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 OARD1Q9Y530 152 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 SNAI1O95863 264 aaPredicted RBP12.19□□□□□ -0.46
COL4A6-209ENST00000545689 ALDOAP04075 364 aaKnown RBP12.19□□□□□ -0.46
COL4A6-209ENST00000545689 TACSTD2P09758 323 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 HSD3B1P14060 373 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 ZNF3P17036 446 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 HSD3B2P26439 372 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 ACSL1P33121 698 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 RPP38P78345 283 aaKnown RBP12.19□□□□□ -0.46
COL4A6-209ENST00000545689 OGFOD2Q6N063 350 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 CAMKVQ8NCB2 501 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 SLC5A11Q8WWX8 675 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 PTPN18Q99952 460 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 MAFFQ9ULX9 164 aa12.19□□□□□ -0.46
COL4A6-209ENST00000545689 PDLIM1O00151 329 aa12.18□□□□□ -0.46
COL4A6-209ENST00000545689 HTRA2O43464 458 aaPredicted RBP12.18□□□□□ -0.46
COL4A6-209ENST00000545689 CD72P21854 359 aa12.18□□□□□ -0.46
COL4A6-209ENST00000545689 CSTF2P33240 577 aaKnown RBP eCLIP12.18□□□□□ -0.46
COL4A6-209ENST00000545689 LRRC32Q14392 662 aa12.18□□□□□ -0.46
COL4A6-209ENST00000545689 KIAA1614Q5VZ46 1190 aa12.18□□□□□ -0.46
COL4A6-209ENST00000545689 LRRC66Q68CR7 880 aa12.18□□□□□ -0.46
COL4A6-209ENST00000545689 NXPE1Q8N323 547 aa12.18□□□□□ -0.46
COL4A6-209ENST00000545689 C16orf70Q9BSU1 422 aa12.18□□□□□ -0.46
COL4A6-209ENST00000545689 ADAMTS10Q9H324 1103 aa12.18□□□□□ -0.46
COL4A6-209ENST00000545689 TBC1D17Q9HA65 648 aa12.18□□□□□ -0.46
COL4A6-209ENST00000545689 C5P01031 1676 aa12.18□□□□□ -0.46
COL4A6-209ENST00000545689 A0A096LPI6 279 aa12.18□□□□□ -0.46
COL4A6-209ENST00000545689 SDHDO14521 159 aa12.18□□□□□ -0.46
COL4A6-209ENST00000545689 RCBTB2O95199 551 aa12.18□□□□□ -0.46
COL4A6-209ENST00000545689 GSRP00390 522 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms