RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 RNF212BA8MTL3 300 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 SOCS6O14544 535 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 MAP2K7O14733 419 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 ZSCAN9O15535 394 aaPredicted RBP3.91□□□□□ -1.78
SNHG1-220ENST00000544550 PROM1O43490 865 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 AKAP10O43572 662 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 KDM1AO60341 852 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 OR2B3O76000 313 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 KLHL18O94889 574 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 CDK14O94921 469 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 SLCO2B1O94956 709 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 ZNF202O95125 648 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 SMC2O95347 1197 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 CLDN7O95471 211 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 HPP00738 406 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 PRLP01236 227 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 RAF1P04049 648 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 CBSLP0DN79 551 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 RBP3P10745 1247 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 MTHFD1P11586 935 aaKnown RBP3.91□□□□□ -1.78
SNHG1-220ENST00000544550 KRT3P12035 628 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 HLA-DPA1P20036 260 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 PCSK6P29122 969 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 CHRNB4P30926 498 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 MC4RP32245 332 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 CBSP35520 551 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 MMP13P45452 471 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 CARSP49589 748 aaKnown RBP3.91□□□□□ -1.78
SNHG1-220ENST00000544550 CTSCP53634 463 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 GSCP56915 257 aaPredicted RBP3.91□□□□□ -1.78
SNHG1-220ENST00000544550 SCAND1P57086 179 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 DCDC1P59894 354 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 ALDH6A1Q02252 535 aaKnown RBP3.91□□□□□ -1.78
SNHG1-220ENST00000544550 SLC10A7Q0GE19 358 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 XRCC4Q13426 336 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 RPE65Q16518 533 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 RBBP7Q16576 425 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 EXOC3L4Q17RC7 722 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 SLC5A12Q1EHB4 618 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 DEFB113Q30KQ7 82 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 VWA3BQ502W6 1294 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 RAB6CQ53S08 254 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 MARC1Q5VT66 337 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 C1orf189Q5VU69 101 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 SHEQ5VZ18 495 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 CD300LDQ6UXZ3 194 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 GBP6Q6ZN66 633 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 ESPNLQ6ZVH7 1005 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 ADGRG6Q86SQ4 1221 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 ZBTB46Q86UZ6 589 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 HOOK3Q86VS8 718 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 AMZ2Q86W34 360 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 PAQR7Q86WK9 346 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 CXorf67Q86X51 503 aaPredicted RBP3.91□□□□□ -1.78
SNHG1-220ENST00000544550 TRAPPC5Q8IUR0 188 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 ARHGAP12Q8IWW6 846 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 GHDCQ8N2G8 530 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 TRAM1L1Q8N609 369 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 FAM98AQ8NCA5 519 aaKnown RBP3.91□□□□□ -1.78
SNHG1-220ENST00000544550 C3orf20Q8ND61 904 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 HIPK4Q8NE63 616 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 GPR150Q8NGU9 434 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 LILRB4Q8NHJ6 448 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 GPT2Q8TD30 523 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 BRSK1Q8TDC3 778 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 AGAP11Q8TF27 550 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 NRGNQ92686 78 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 GLYATL1Q969I3 302 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.91□□□□□ -1.78
SNHG1-220ENST00000544550 NSMCE3Q96MG7 304 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 TTC25Q96NG3 672 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 WDR24Q96S15 920 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 FOXB1Q99853 325 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 SMR3AQ99954 134 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 SELENOOQ9BVL4 669 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 SARGQ9BW04 601 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 SPATA16Q9BXB7 569 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 MAGEB5Q9BZ81 275 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 RAB6CQ9H0N0 254 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 KIR3DX1Q9H7L2 352 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 KCNJ16Q9NPI9 418 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 SIRT5Q9NXA8 310 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 TRIM10Q9UDY6 481 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 SLC23A2Q9UGH3 650 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 TEKT2Q9UIF3 430 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 HOOK1Q9UJC3 728 aaKnown RBP3.91□□□□□ -1.78
SNHG1-220ENST00000544550 RCOR1Q9UKL0 485 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 POMT2Q9UKY4 750 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 WDR37Q9Y2I8 494 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 HEBP2Q9Y5Z4 205 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.91□□□□□ -1.78
SNHG1-220ENST00000544550 ANKRD36A6QL64 1941 aa3.91□□□□□ -1.78
SNHG1-220ENST00000544550 NSG1A0A0A6YYJ2 146 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 GTPBP10A4D1E9 387 aaKnown RBP3.9□□□□□ -1.79
SNHG1-220ENST00000544550 OR5H15A6NDH6 313 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 C2orf74A8MZ97 194 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 FOXN3O00409 490 aaPredicted RBP3.9□□□□□ -1.79
SNHG1-220ENST00000544550 TTI1O43156 1089 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 ARHGEF9O43307 516 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 ALOX12BO75342 701 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms