RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 ICE2Q659A1 982 aa29.34■■■□□ 2.29
CCM2-219ENST00000544363 HIST2H2AA3Q6FI13 130 aa29.34■■■□□ 2.29
CCM2-219ENST00000544363 FNDC5Q8NAU1 212 aa29.34■■■□□ 2.29
CCM2-219ENST00000544363 OR7G3Q8NG95 312 aa29.34■■■□□ 2.29
CCM2-219ENST00000544363 OR2A1Q8NGT9 310 aa29.34■■■□□ 2.29
CCM2-219ENST00000544363 CMTM5Q96DZ9 223 aa29.34■■■□□ 2.29
CCM2-219ENST00000544363 KNL1Q8NG31 2342 aa29.34■■■□□ 2.29
CCM2-219ENST00000544363 A0A1B0GTW7 788 aa29.33■■■□□ 2.29
CCM2-219ENST00000544363 HRO43593 1189 aa29.33■■■□□ 2.29
CCM2-219ENST00000544363 STX1BP61266 288 aa29.33■■■□□ 2.29
CCM2-219ENST00000544363 YBX1P67809 324 aaKnown RBP29.33■■■□□ 2.29
CCM2-219ENST00000544363 EMX2Q04743 252 aa29.33■■■□□ 2.29
CCM2-219ENST00000544363 SMU1Q2TAY7 513 aa29.33■■■□□ 2.29
CCM2-219ENST00000544363 FAM129CQ86XR2 697 aa29.33■■■□□ 2.29
CCM2-219ENST00000544363 SFTPA2Q8IWL1 248 aa29.33■■■□□ 2.29
CCM2-219ENST00000544363 LAS2Q8IYD9 372 aa29.33■■■□□ 2.29
CCM2-219ENST00000544363 ABHD11Q8NFV4 315 aa29.33■■■□□ 2.29
CCM2-219ENST00000544363 SRMSQ9H3Y6 488 aa29.33■■■□□ 2.29
CCM2-219ENST00000544363 A0A1B0GVT2 93 aa29.32■■■□□ 2.28
CCM2-219ENST00000544363 PIPSLA2A3N6 862 aa29.32■■■□□ 2.28
CCM2-219ENST00000544363 IDO1P14902 403 aa29.32■■■□□ 2.28
CCM2-219ENST00000544363 GNSP15586 552 aa29.32■■■□□ 2.28
CCM2-219ENST00000544363 PRDX1Q06830 199 aaKnown RBP29.32■■■□□ 2.28
CCM2-219ENST00000544363 CSTF3Q12996 717 aaKnown RBP29.32■■■□□ 2.28
CCM2-219ENST00000544363 GPR18Q14330 331 aa29.32■■■□□ 2.28
CCM2-219ENST00000544363 SDR16C5Q8N3Y7 309 aa29.32■■■□□ 2.28
CCM2-219ENST00000544363 LRTM1Q9HBL6 345 aa29.32■■■□□ 2.28
CCM2-219ENST00000544363 CUEDC1Q9NWM3 386 aaPredicted RBP29.32■■■□□ 2.28
CCM2-219ENST00000544363 RSL1D1O76021 490 aaKnown RBP29.31■■■□□ 2.28
CCM2-219ENST00000544363 PEBP1P30086 187 aaKnown RBP29.31■■■□□ 2.28
CCM2-219ENST00000544363 RASSF2P50749 326 aa29.31■■■□□ 2.28
CCM2-219ENST00000544363 DIO3P55073 304 aa29.31■■■□□ 2.28
CCM2-219ENST00000544363 PLCL1Q15111 1095 aa29.31■■■□□ 2.28
CCM2-219ENST00000544363 KIF19Q2TAC6 998 aa29.31■■■□□ 2.28
CCM2-219ENST00000544363 C10orf62Q5T681 223 aaPredicted RBP29.31■■■□□ 2.28
CCM2-219ENST00000544363 SLC9B2Q86UD5 537 aa29.31■■■□□ 2.28
CCM2-219ENST00000544363 ZNF548Q8NEK5 533 aaPredicted RBP29.31■■■□□ 2.28
CCM2-219ENST00000544363 UBE2E3Q969T4 207 aa29.31■■■□□ 2.28
CCM2-219ENST00000544363 SLC7A6OSQ96CW6 309 aaPredicted RBP29.31■■■□□ 2.28
CCM2-219ENST00000544363 SPNS1Q9H2V7 528 aa29.31■■■□□ 2.28
CCM2-219ENST00000544363 ERVMER34-1Q9H9K5 563 aa29.31■■■□□ 2.28
CCM2-219ENST00000544363 AIG1Q9NVV5 245 aa29.31■■■□□ 2.28
CCM2-219ENST00000544363 C1orf109Q9NX04 203 aa29.31■■■□□ 2.28
CCM2-219ENST00000544363 DOLKQ9UPQ8 538 aa29.31■■■□□ 2.28
CCM2-219ENST00000544363 B4DGG1 531 aa29.31■■■□□ 2.28
CCM2-219ENST00000544363 NPIPB8E9PQR5 432 aa29.31■■■□□ 2.28
CCM2-219ENST00000544363 PSMD12O00232 456 aaPredicted RBP29.31■■■□□ 2.28
CCM2-219ENST00000544363 YY2O15391 372 aa29.31■■■□□ 2.28
CCM2-219ENST00000544363 AQP9O43315 295 aa29.31■■■□□ 2.28
CCM2-219ENST00000544363 GPR37L1O60883 481 aa29.31■■■□□ 2.28
CCM2-219ENST00000544363 CHRM5P08912 532 aaPredicted RBP29.31■■■□□ 2.28
CCM2-219ENST00000544363 PCNAP12004 261 aa29.31■■■□□ 2.28
CCM2-219ENST00000544363 COX4I1P13073 169 aa29.31■■■□□ 2.28
CCM2-219ENST00000544363 HSD3B1P14060 373 aa29.31■■■□□ 2.28
CCM2-219ENST00000544363 PRPH2P23942 346 aa29.31■■■□□ 2.28
CCM2-219ENST00000544363 HSD3B2P26439 372 aa29.31■■■□□ 2.28
CCM2-219ENST00000544363 CCR8P51685 355 aa29.31■■■□□ 2.28
CCM2-219ENST00000544363 MEF2AQ02078 507 aaPredicted RBP29.31■■■□□ 2.28
CCM2-219ENST00000544363 RFTN2Q52LD8 501 aaPredicted RBP29.31■■■□□ 2.28
CCM2-219ENST00000544363 KRT78Q8N1N4 520 aa29.31■■■□□ 2.28
CCM2-219ENST00000544363 FBXL6Q8N531 539 aa29.31■■■□□ 2.28
CCM2-219ENST00000544363 POU5F2Q8N7G0 328 aa29.31■■■□□ 2.28
CCM2-219ENST00000544363 MTERF1Q99551 399 aaKnown RBP29.31■■■□□ 2.28
CCM2-219ENST00000544363 C1orf50Q9BV19 199 aa29.31■■■□□ 2.28
CCM2-219ENST00000544363 BRF2Q9HAW0 419 aa29.31■■■□□ 2.28
CCM2-219ENST00000544363 SPHK1Q9NYA1 384 aa29.31■■■□□ 2.28
CCM2-219ENST00000544363 GPR45Q9Y5Y3 372 aa29.31■■■□□ 2.28
CCM2-219ENST00000544363 ZDBF2Q9HCK1 2354 aa29.3■■■□□ 2.28
CCM2-219ENST00000544363 GPX3P22352 226 aa29.3■■■□□ 2.28
CCM2-219ENST00000544363 CXCR2P25025 360 aa29.3■■■□□ 2.28
CCM2-219ENST00000544363 MRPL19P49406 292 aaKnown RBP29.3■■■□□ 2.28
CCM2-219ENST00000544363 ABATP80404 500 aa29.3■■■□□ 2.28
CCM2-219ENST00000544363 MAD2L1Q13257 205 aaPredicted RBP29.3■■■□□ 2.28
CCM2-219ENST00000544363 DDX39BQ13838 428 aaKnown RBP29.3■■■□□ 2.28
CCM2-219ENST00000544363 HERC3Q15034 1050 aa29.3■■■□□ 2.28
CCM2-219ENST00000544363 ZFAND4Q86XD8 727 aa29.3■■■□□ 2.28
CCM2-219ENST00000544363 RBM12BQ8IXT5 1001 aaKnown RBP29.3■■■□□ 2.28
CCM2-219ENST00000544363 ADGRF3Q8IZF5 1079 aa29.3■■■□□ 2.28
CCM2-219ENST00000544363 MIER2Q8N344 545 aa29.3■■■□□ 2.28
CCM2-219ENST00000544363 RNF175Q8N4F7 328 aa29.3■■■□□ 2.28
CCM2-219ENST00000544363 OR4K1Q8NGD4 311 aa29.3■■■□□ 2.28
CCM2-219ENST00000544363 HUS1BQ8NHY5 278 aa29.3■■■□□ 2.28
CCM2-219ENST00000544363 NELL1Q92832 810 aa29.3■■■□□ 2.28
CCM2-219ENST00000544363 AIF1LQ9BQI0 150 aa29.3■■■□□ 2.28
CCM2-219ENST00000544363 SDR39U1Q9NRG7 319 aaPredicted RBP29.3■■■□□ 2.28
CCM2-219ENST00000544363 TMEM74BQ9NUR3 256 aa29.3■■■□□ 2.28
CCM2-219ENST00000544363 SUSD2Q9UGT4 822 aa29.3■■■□□ 2.28
CCM2-219ENST00000544363 PILRBQ9UKJ0 227 aa29.3■■■□□ 2.28
CCM2-219ENST00000544363 TSC22D4Q9Y3Q8 395 aa29.3■■■□□ 2.28
CCM2-219ENST00000544363 LOC100653049A0A140TA62 436 aa29.29■■■□□ 2.28
CCM2-219ENST00000544363 SEC22BO75396 215 aa29.29■■■□□ 2.28
CCM2-219ENST00000544363 KRT34O76011 436 aa29.29■■■□□ 2.28
CCM2-219ENST00000544363 THRAP10827 490 aa29.29■■■□□ 2.28
CCM2-219ENST00000544363 CD1EP15812 388 aa29.29■■■□□ 2.28
CCM2-219ENST00000544363 CTSKP43235 329 aa29.29■■■□□ 2.28
CCM2-219ENST00000544363 CPA2P48052 419 aa29.29■■■□□ 2.28
CCM2-219ENST00000544363 RPL38P63173 70 aaKnown RBP29.29■■■□□ 2.28
CCM2-219ENST00000544363 RPS6KA2Q15349 733 aa29.29■■■□□ 2.28
CCM2-219ENST00000544363 BMP8AQ7Z5Y6 402 aa29.29■■■□□ 2.28
CCM2-219ENST00000544363 RP9Q8TA86 221 aaKnown RBP29.29■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms