RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 BRF2Q9HAW0 419 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 WDR70Q9NW82 654 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 C2orf42Q9NWW7 574 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 MOSPD1Q9UJG1 213 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 CA5BQ9Y2D0 317 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 TDRKHQ9Y2W6 561 aaKnown RBP9.02□□□□□ -0.97
GNE-206ENST00000543356 TMED5Q9Y3A6 229 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 PLEKHM1Q9Y4G2 1056 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 PCDHGA11Q9Y5H2 935 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 C19orf67A6NJJ6 358 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 FAM170BA6NMN3 283 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 H0Y8X5 98 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 ANKRD28O15084 1053 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 ANGPT2O15123 496 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 C1GALT1C1LP0DN25 315 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 G6PDP11413 515 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 CAPN3P20807 821 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 KCNK10P57789 538 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 UFM1P61960 85 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 LAPTM5Q13571 262 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 KIAA0040Q15053 153 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 PAGE2BQ5JRK9 111 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 TPRG1LQ5T0D9 272 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 C6orf163Q5TEZ5 329 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 CACHD1Q5VU97 1274 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 WASH2PQ6VEQ5 465 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 TMPRSS11BQ86T26 416 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 FBXW8Q8N3Y1 598 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 MTFMTQ96DP5 389 aaKnown RBP9.01□□□□□ -0.97
GNE-206ENST00000543356 METTL2AQ96IZ6 378 aaKnown RBP9.01□□□□□ -0.97
GNE-206ENST00000543356 IL17FQ96PD4 163 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 SERPINI1Q99574 410 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 PCBD2Q9H0N5 130 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 CHRDQ9H2X0 955 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 WASH6PQ9NQA3 447 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 SPATA6Q9NWH7 488 aaPredicted RBP9.01□□□□□ -0.97
GNE-206ENST00000543356 PLAGL1Q9UM63 463 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 TSC22D4Q9Y3Q8 395 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 HEBP2Q9Y5Z4 205 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 NUMA1Q14980 2115 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 A0A1W2PP18 115 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 SEC22BO75396 215 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 EEDO75530 441 aaKnown RBP9.01□□□□□ -0.97
GNE-206ENST00000543356 VARSP26640 1264 aaKnown RBP9.01□□□□□ -0.97
GNE-206ENST00000543356 MAPK1P28482 360 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 POLR2JP52435 117 aaKnown RBP9.01□□□□□ -0.97
GNE-206ENST00000543356 THOP1P52888 689 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 USP39Q53GS9 565 aaKnown RBP9.01□□□□□ -0.97
GNE-206ENST00000543356 RNF220Q5VTB9 566 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 DUS1LQ6P1R4 473 aaKnown RBP9.01□□□□□ -0.97
GNE-206ENST00000543356 MED27Q6P2C8 311 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 NXPE4Q6UWF7 544 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 LAS2Q8IYD9 372 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 UBALD2Q8IYN6 164 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 FAM9CQ8IZT9 166 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 GJD3Q8N144 294 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 FAM174AQ8TBP5 190 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 PROKR1Q8TCW9 393 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 SMPDL3AQ92484 453 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 TEX37Q96LM6 180 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 FERD3LQ96RJ6 166 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 FOXQ1Q9C009 403 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 ACTL8Q9H568 366 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 GPR27Q9NS67 375 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 PCOLCE2Q9UKZ9 415 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 SH2B3Q9UQQ2 575 aa9.01□□□□□ -0.97
GNE-206ENST00000543356 CFAP20Q9Y6A4 193 aaKnown RBP9.01□□□□□ -0.97
GNE-206ENST00000543356 UNC80Q8N2C7 3258 aa9□□□□□ -0.97
GNE-206ENST00000543356 IGHV1OR15-9A0A0B4J2B8 117 aa9□□□□□ -0.97
GNE-206ENST00000543356 E2F6O75461 281 aa9□□□□□ -0.97
GNE-206ENST00000543356 MTHFD1P11586 935 aaKnown RBP9□□□□□ -0.97
GNE-206ENST00000543356 PRPS2P11908 318 aa9□□□□□ -0.97
GNE-206ENST00000543356 PKLRP30613 574 aa9□□□□□ -0.97
GNE-206ENST00000543356 NEK2P51955 445 aa9□□□□□ -0.97
GNE-206ENST00000543356 SRP54P61011 504 aaKnown RBP9□□□□□ -0.97
GNE-206ENST00000543356 PSME3P61289 254 aa9□□□□□ -0.97
GNE-206ENST00000543356 FOXM1Q08050 763 aa9□□□□□ -0.97
GNE-206ENST00000543356 PRKG2Q13237 762 aa9□□□□□ -0.97
GNE-206ENST00000543356 KPNB1Q14974 876 aaKnown RBP9□□□□□ -0.97
GNE-206ENST00000543356 CLCA4Q14CN2 919 aa9□□□□□ -0.97
GNE-206ENST00000543356 RPE65Q16518 533 aa9□□□□□ -0.97
GNE-206ENST00000543356 ALG11Q2TAA5 492 aa9□□□□□ -0.97
GNE-206ENST00000543356 FOXB2Q5VYV0 432 aa9□□□□□ -0.97
GNE-206ENST00000543356 PRMT9Q6P2P2 845 aa9□□□□□ -0.97
GNE-206ENST00000543356 SUSD1Q6UWL2 747 aa9□□□□□ -0.97
GNE-206ENST00000543356 ABRAXAS1Q6UWZ7 409 aa9□□□□□ -0.97
GNE-206ENST00000543356 Q6ZSR6 202 aa9□□□□□ -0.97
GNE-206ENST00000543356 RETREG3Q86VR2 466 aa9□□□□□ -0.97
GNE-206ENST00000543356 SIX5Q8N196 739 aa9□□□□□ -0.97
GNE-206ENST00000543356 GLB1L3Q8NCI6 653 aaPredicted RBP9□□□□□ -0.97
GNE-206ENST00000543356 OR7G3Q8NG95 312 aa9□□□□□ -0.97
GNE-206ENST00000543356 WDR60Q8WVS4 1066 aa9□□□□□ -0.97
GNE-206ENST00000543356 UBE2E3Q969T4 207 aa9□□□□□ -0.97
GNE-206ENST00000543356 BIRC7Q96CA5 298 aa9□□□□□ -0.97
GNE-206ENST00000543356 CAMK1GQ96NX5 476 aa9□□□□□ -0.97
GNE-206ENST00000543356 GPR174Q9BXC1 333 aa9□□□□□ -0.97
GNE-206ENST00000543356 PCED1AQ9H1Q7 454 aa9□□□□□ -0.97
GNE-206ENST00000543356 PELI2Q9HAT8 420 aa9□□□□□ -0.97
GNE-206ENST00000543356 IMP3Q9NV31 184 aaKnown RBP9□□□□□ -0.97
GNE-206ENST00000543356 TRNAU1APQ9NX07 287 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms