RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 UGT2B17O75795 530 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 C1QAP02745 245 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 ARNTP27540 789 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 MAP2K4P45985 399 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 CLDN8P56748 225 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 COPZ1P61923 177 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 RPP38P78345 283 aaKnown RBP7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 PTSQ03393 145 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 FNDC3BQ53EP0 1204 aaKnown RBP7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 TXNDC8Q6A555 127 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 TMEM220Q6QAJ8 160 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 CLIP4Q8N3C7 705 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 DCAF4L2Q8NA75 395 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 TEX47Q8TBZ9 253 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 FRS2Q8WU20 508 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 NCSTNQ92542 709 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 TMCO6Q96DC7 493 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 MMP27Q9H306 513 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 RETREG1Q9H6L5 497 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 RPRD1BQ9NQG5 326 aaKnown RBP7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 SEMA3GQ9NS98 782 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 ABCB8Q9NUT2 735 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 ZNF624Q9P2J8 865 aaPredicted RBP7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 RNF6Q9Y252 685 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 OARD1Q9Y530 152 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 PCDHGA8Q9Y5G5 932 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 OAS3Q9Y6K5 1087 aaKnown RBP7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 A0A1W2PRB8 838 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 STX11O75558 287 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 CHRM5P08912 532 aaPredicted RBP7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 RPL34P49207 117 aaKnown RBP7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 RELAQ04206 551 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 RNF111Q6ZNA4 994 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 USP30Q70CQ3 517 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 MRPL10Q7Z7H8 261 aaKnown RBP7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 DSG4Q86SJ6 1040 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 LAPTM4BQ86VI4 370 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 CACUL1Q86Y37 369 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 HS3ST5Q8IZT8 346 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 DPP10Q8N608 796 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 CD200R1Q8TD46 325 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 COL21A1Q96P44 957 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 MGME1Q9BQP7 344 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 NECTIN3Q9NQS3 549 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 POFUT2Q9Y2G5 429 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 MRPS7Q9Y2R9 242 aaKnown RBP7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 ACTL7AQ9Y615 435 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 SBF2Q86WG5 1849 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 MROH6A6NGR9 719 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 COCHO43405 550 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 SNX4O95219 450 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 TGFB1P01137 390 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 FGBP02675 491 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 MT-ND2P03891 347 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 ATP1B2P14415 290 aaPredicted RBP7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 GKP32189 559 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 ALDH3B2P48448 385 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 SLC11A1P49279 550 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 MAPK12P53778 367 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 PNLIPRP1P54315 467 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 ADAM17P78536 824 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 MLLT1Q03111 559 aaPredicted RBP7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 SCARB2Q14108 478 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 GANABQ14697 944 aaKnown RBP7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 PCBP2Q15366 365 aaKnown RBP eCLIP7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 C18orf21Q32NC0 220 aaPredicted RBP7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 XKR4Q5GH76 650 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 SPARTQ8N0X7 666 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 CACTIN-AS1Q8N1I8 211 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 TTC9BQ8N6N2 239 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 CRELD1Q96HD1 420 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 AIF1LQ9BQI0 150 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 HEPHQ9BQS7 1158 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 SPRTNQ9H040 489 aaPredicted RBP7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 POLR2J3Q9H1A7 115 aaKnown RBP7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 ABCB9Q9NP78 766 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 SNTG1Q9NSN8 517 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 TMEM39AQ9NV64 488 aa7.98□□□□□ -1.13
PRKAB1-207ENST00000542698 GRXCR2A6NFK2 248 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 ARNTLO00327 626 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 AP3D1O14617 1153 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 PDYNP01213 254 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 FEN1P39748 380 aaKnown RBP7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 SLC15A1P46059 708 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 GABARAPL2P60520 117 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 CYP4F8P98187 520 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 COX10Q12887 443 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 TYSND1Q2T9J0 566 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 GTDC1Q4AE62 458 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 TMEM236Q5W0B7 351 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 ZNF544Q6NX49 715 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 ZNF598Q86UK7 904 aaKnown RBP7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 ZNF513Q8N8E2 541 aaPredicted RBP7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 ZNF461Q8TAF7 563 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 SUSD6Q92537 303 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 USP7Q93009 1102 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 SLC38A4Q969I6 547 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 SLC35A5Q9BS91 424 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 MCMBPQ9BTE3 642 aa7.97□□□□□ -1.13
PRKAB1-207ENST00000542698 PAK1IP1Q9NWT1 392 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms