RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 MYO9BQ13459 2157 aa16.67■□□□□ 0.26
SPIDR-227ENST00000541342 HLA-EP13747 358 aa16.67■□□□□ 0.26
SPIDR-227ENST00000541342 PRKACGP22612 351 aa16.67■□□□□ 0.26
SPIDR-227ENST00000541342 CD300CQ08708 224 aa16.67■□□□□ 0.26
SPIDR-227ENST00000541342 ITGADQ13349 1161 aa16.67■□□□□ 0.26
SPIDR-227ENST00000541342 PCBP2Q15366 365 aaKnown RBP eCLIP16.67■□□□□ 0.269e-7■■■■■ 31
SPIDR-227ENST00000541342 ZDHHC20Q5W0Z9 365 aa16.67■□□□□ 0.26
SPIDR-227ENST00000541342 GPR149Q86SP6 731 aa16.67■□□□□ 0.26
SPIDR-227ENST00000541342 ADAMTSL2Q86TH1 951 aa16.67■□□□□ 0.26
SPIDR-227ENST00000541342 SLC13A3Q8WWT9 602 aa16.67■□□□□ 0.26
SPIDR-227ENST00000541342 ANTXRLA6NF34 631 aa16.67■□□□□ 0.26
SPIDR-227ENST00000541342 DGKAP23743 735 aa16.67■□□□□ 0.26
SPIDR-227ENST00000541342 GSTM4Q03013 218 aa16.67■□□□□ 0.26
SPIDR-227ENST00000541342 TTC23Q5W5X9 447 aa16.67■□□□□ 0.26
SPIDR-227ENST00000541342 SLC47A1Q96FL8 570 aa16.67■□□□□ 0.26
SPIDR-227ENST00000541342 LATS2Q9NRM7 1088 aa16.67■□□□□ 0.26
SPIDR-227ENST00000541342 LIMD1Q9UGP4 676 aa16.67■□□□□ 0.26
SPIDR-227ENST00000541342 TMEFF2Q9UIK5 374 aaPredicted RBP16.67■□□□□ 0.26
SPIDR-227ENST00000541342 ENPP5Q9UJA9 477 aa16.67■□□□□ 0.26
SPIDR-227ENST00000541342 LRRK1Q38SD2 2015 aa16.66■□□□□ 0.26
SPIDR-227ENST00000541342 ARL1P40616 181 aaPredicted RBP16.66■□□□□ 0.26
SPIDR-227ENST00000541342 GABARAPL2P60520 117 aa16.66■□□□□ 0.26
SPIDR-227ENST00000541342 GTF2H2Q13888 395 aa16.66■□□□□ 0.26
SPIDR-227ENST00000541342 RGS21Q2M5E4 152 aa16.66■□□□□ 0.26
SPIDR-227ENST00000541342 EGFLAMQ63HQ2 1017 aa16.66■□□□□ 0.26
SPIDR-227ENST00000541342 NIPAL1Q6NVV3 410 aa16.66■□□□□ 0.26
SPIDR-227ENST00000541342 GTF2H2CQ6P1K8 395 aa16.66■□□□□ 0.26
SPIDR-227ENST00000541342 CRTC3Q6UUV7 619 aa16.66■□□□□ 0.26
SPIDR-227ENST00000541342 VITQ6UXI7 678 aa16.66■□□□□ 0.26
SPIDR-227ENST00000541342 FRA10AC1Q70Z53 315 aa16.66■□□□□ 0.26
SPIDR-227ENST00000541342 PARS2Q7L3T8 475 aaKnown RBP16.66■□□□□ 0.26
SPIDR-227ENST00000541342 DET1Q7L5Y6 550 aa16.66■□□□□ 0.26
SPIDR-227ENST00000541342 NRBF2Q96F24 287 aa16.66■□□□□ 0.26
SPIDR-227ENST00000541342 ACTR8Q9H981 624 aa16.66■□□□□ 0.26
SPIDR-227ENST00000541342 TRPV4Q9HBA0 871 aa16.66■□□□□ 0.26
SPIDR-227ENST00000541342 FARSBQ9NSD9 589 aaKnown RBP16.66■□□□□ 0.26
SPIDR-227ENST00000541342 GDE1Q9NZC3 331 aa16.66■□□□□ 0.26
SPIDR-227ENST00000541342 DKK3Q9UBP4 350 aa16.66■□□□□ 0.26
SPIDR-227ENST00000541342 ITM2BQ9Y287 266 aa16.66■□□□□ 0.26
SPIDR-227ENST00000541342 SLC1A7O00341 560 aa16.66■□□□□ 0.26
SPIDR-227ENST00000541342 MTX2O75431 263 aa16.66■□□□□ 0.26
SPIDR-227ENST00000541342 PRKD3O94806 890 aa16.66■□□□□ 0.26
SPIDR-227ENST00000541342 CCR7P32248 378 aa16.66■□□□□ 0.26
SPIDR-227ENST00000541342 RGS4P49798 205 aa16.66■□□□□ 0.26
SPIDR-227ENST00000541342 ST8SIA6P61647 398 aa16.66■□□□□ 0.26
SPIDR-227ENST00000541342 CYP4F3Q08477 520 aa16.66■□□□□ 0.26
SPIDR-227ENST00000541342 GRIN2CQ14957 1233 aa16.66■□□□□ 0.26
SPIDR-227ENST00000541342 PHKG1Q16816 387 aa16.66■□□□□ 0.26
SPIDR-227ENST00000541342 FAM174BQ3ZCQ3 159 aa16.66■□□□□ 0.26
SPIDR-227ENST00000541342 GTDC1Q4AE62 458 aa16.66■□□□□ 0.26
SPIDR-227ENST00000541342 SPESP1Q6UW49 350 aa16.66■□□□□ 0.26
SPIDR-227ENST00000541342 ULK4Q96C45 1275 aa16.66■□□□□ 0.26
SPIDR-227ENST00000541342 SH3YL1Q96HL8 342 aaPredicted RBP16.66■□□□□ 0.26
SPIDR-227ENST00000541342 LRIG1Q96JA1 1093 aa16.66■□□□□ 0.26
SPIDR-227ENST00000541342 UGT2B28Q9BY64 529 aa16.66■□□□□ 0.26
SPIDR-227ENST00000541342 NSUN3Q9H649 340 aaKnown RBP16.66■□□□□ 0.26
SPIDR-227ENST00000541342 TRNAU1APQ9NX07 287 aaKnown RBP16.66■□□□□ 0.26
SPIDR-227ENST00000541342 DEC1Q9P2X7 70 aa16.66■□□□□ 0.26
SPIDR-227ENST00000541342 AREL1O15033 823 aa16.65■□□□□ 0.26
SPIDR-227ENST00000541342 FFAR2O15552 330 aa16.65■□□□□ 0.26
SPIDR-227ENST00000541342 GGT5P36269 586 aa16.65■□□□□ 0.26
SPIDR-227ENST00000541342 RPL38P63173 70 aaKnown RBP16.65■□□□□ 0.26
SPIDR-227ENST00000541342 DNAJC14Q6Y2X3 702 aaPredicted RBP16.65■□□□□ 0.26
SPIDR-227ENST00000541342 DPPA4Q7L190 304 aa16.65■□□□□ 0.26
SPIDR-227ENST00000541342 KRTCAP2Q8N6L1 136 aa16.65■□□□□ 0.26
SPIDR-227ENST00000541342 ITCHQ96J02 903 aa16.65■□□□□ 0.26
SPIDR-227ENST00000541342 MAGED4Q96JG8 741 aa16.65■□□□□ 0.26
SPIDR-227ENST00000541342 TBCDQ9BTW9 1192 aa16.65■□□□□ 0.26
SPIDR-227ENST00000541342 FAM83DQ9H4H8 585 aa16.65■□□□□ 0.26
SPIDR-227ENST00000541342 DZANK1Q9NVP4 752 aa16.65■□□□□ 0.26
SPIDR-227ENST00000541342 TAPBPO15533 448 aa16.65■□□□□ 0.26
SPIDR-227ENST00000541342 MMP12P39900 470 aa16.65■□□□□ 0.26
SPIDR-227ENST00000541342 PIK3CGP48736 1102 aa16.65■□□□□ 0.26
SPIDR-227ENST00000541342 SYCE2Q6PIF2 218 aa16.65■□□□□ 0.26
SPIDR-227ENST00000541342 WARS2Q9UGM6 360 aaKnown RBP16.65■□□□□ 0.26
SPIDR-227ENST00000541342 INVSQ9Y283 1065 aa16.65■□□□□ 0.26
SPIDR-227ENST00000541342 OARD1Q9Y530 152 aa16.65■□□□□ 0.26
SPIDR-227ENST00000541342 FADS2P1A8MWK0 482 aa16.65■□□□□ 0.26
SPIDR-227ENST00000541342 IFRD1O00458 451 aaPredicted RBP16.65■□□□□ 0.26
SPIDR-227ENST00000541342 SPINT1O43278 529 aa16.65■□□□□ 0.26
SPIDR-227ENST00000541342 GUCA1CO95843 209 aa16.65■□□□□ 0.26
SPIDR-227ENST00000541342 DCTP40126 519 aa16.65■□□□□ 0.26
SPIDR-227ENST00000541342 RXRGP48443 463 aa16.65■□□□□ 0.26
SPIDR-227ENST00000541342 DCDC1P59894 354 aa16.65■□□□□ 0.26
SPIDR-227ENST00000541342 C9orf64Q5T6V5 341 aa16.65■□□□□ 0.26
SPIDR-227ENST00000541342 HENMT1Q5T8I9 393 aaKnown RBP16.65■□□□□ 0.26
SPIDR-227ENST00000541342 ZNF691Q5VV52 312 aa16.65■□□□□ 0.26
SPIDR-227ENST00000541342 PHACTR4Q8IZ21 702 aa16.65■□□□□ 0.26
SPIDR-227ENST00000541342 THUMPD3Q9BV44 507 aaKnown RBP16.65■□□□□ 0.26
SPIDR-227ENST00000541342 PLA2G2FQ9BZM2 168 aa16.65■□□□□ 0.26
SPIDR-227ENST00000541342 IPPKQ9H8X2 491 aa16.65■□□□□ 0.26
SPIDR-227ENST00000541342 BAG5Q9UL15 447 aa16.65■□□□□ 0.26
SPIDR-227ENST00000541342 BLOC1S6Q9UL45 172 aa16.65■□□□□ 0.26
SPIDR-227ENST00000541342 LOC100130705A0A1B0GUX0 176 aa16.64■□□□□ 0.25
SPIDR-227ENST00000541342 FNDC3BQ53EP0 1204 aaKnown RBP16.64■□□□□ 0.25
SPIDR-227ENST00000541342 SPANXN4Q5MJ08 99 aa16.64■□□□□ 0.25
SPIDR-227ENST00000541342 HCAR2Q8TDS4 363 aa16.64■□□□□ 0.25
SPIDR-227ENST00000541342 FBLIM1Q8WUP2 373 aa16.64■□□□□ 0.25
SPIDR-227ENST00000541342 ZNF347Q96SE7 839 aa16.64■□□□□ 0.25
SPIDR-227ENST00000541342 CDCA3Q99618 268 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms