RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 TMEM184BQ9Y519 407 aaPredicted RBP18.03■□□□□ 0.48
VPS33A-205ENST00000541169 ANKRD12Q6UB98 2062 aa18.03■□□□□ 0.48
VPS33A-205ENST00000541169 KCNE1BA0A087WTH5 132 aa18.02■□□□□ 0.48
VPS33A-205ENST00000541169 TLDC2A0PJX2 215 aa18.02■□□□□ 0.48
VPS33A-205ENST00000541169 SUPT3HB4E1H0 165 aa18.02■□□□□ 0.48
VPS33A-205ENST00000541169 TMEM150CB9EJG8 249 aa18.02■□□□□ 0.48
VPS33A-205ENST00000541169 E7EQ34 232 aa18.02■□□□□ 0.48
VPS33A-205ENST00000541169 KLK8O60259 260 aa18.02■□□□□ 0.48
VPS33A-205ENST00000541169 SMIM24O75264 130 aa18.02■□□□□ 0.48
VPS33A-205ENST00000541169 SUPT3HO75486 399 aa18.02■□□□□ 0.48
VPS33A-205ENST00000541169 CAPNS1P04632 268 aa18.02■□□□□ 0.48
VPS33A-205ENST00000541169 CXCR2P25025 360 aa18.02■□□□□ 0.48
VPS33A-205ENST00000541169 PIK3CGP48736 1102 aa18.02■□□□□ 0.48
VPS33A-205ENST00000541169 CCR8P51685 355 aa18.02■□□□□ 0.48
VPS33A-205ENST00000541169 EMP3P54852 163 aa18.02■□□□□ 0.48
VPS33A-205ENST00000541169 RPS15AP62244 130 aaKnown RBP18.02■□□□□ 0.48
VPS33A-205ENST00000541169 KCNAB1Q14722 419 aa18.02■□□□□ 0.48
VPS33A-205ENST00000541169 NAA30Q147X3 362 aaPredicted RBP18.02■□□□□ 0.48
VPS33A-205ENST00000541169 GPR19Q15760 415 aa18.02■□□□□ 0.48
VPS33A-205ENST00000541169 ZIC1Q15915 447 aa18.02■□□□□ 0.48
VPS33A-205ENST00000541169 TECRLQ5HYJ1 363 aa18.02■□□□□ 0.48
VPS33A-205ENST00000541169 FCRL6Q6DN72 434 aa18.02■□□□□ 0.48
VPS33A-205ENST00000541169 RNF44Q7L0R7 432 aa18.02■□□□□ 0.48
VPS33A-205ENST00000541169 LRRC70Q7Z2Q7 622 aa18.02■□□□□ 0.48
VPS33A-205ENST00000541169 PAQR7Q86WK9 346 aa18.02■□□□□ 0.48
VPS33A-205ENST00000541169 MCATQ8IVS2 390 aaKnown RBP18.02■□□□□ 0.48
VPS33A-205ENST00000541169 ZNF655Q8N720 491 aaPredicted RBP18.02■□□□□ 0.48
VPS33A-205ENST00000541169 SCYL1Q96KG9 808 aa18.02■□□□□ 0.48
VPS33A-205ENST00000541169 LRFN5Q96NI6 719 aa18.02■□□□□ 0.48
VPS33A-205ENST00000541169 DPH2Q9BQC3 489 aaPredicted RBP18.02■□□□□ 0.48
VPS33A-205ENST00000541169 ULBP3Q9BZM4 244 aa18.02■□□□□ 0.48
VPS33A-205ENST00000541169 CD244Q9BZW8 370 aa18.02■□□□□ 0.48
VPS33A-205ENST00000541169 EHD1Q9H4M9 534 aa18.02■□□□□ 0.48
VPS33A-205ENST00000541169 PCMTD2Q9NV79 361 aa18.02■□□□□ 0.48
VPS33A-205ENST00000541169 NCF1BA6NI72 391 aaPredicted RBP18.01■□□□□ 0.47
VPS33A-205ENST00000541169 NCF1CA8MVU1 366 aaPredicted RBP18.01■□□□□ 0.47
VPS33A-205ENST00000541169 C1QTNF9BB2RNN3 333 aa18.01■□□□□ 0.47
VPS33A-205ENST00000541169 MAP2K7O14733 419 aa18.01■□□□□ 0.47
VPS33A-205ENST00000541169 CPNE3O75131 537 aaKnown RBP18.01■□□□□ 0.47
VPS33A-205ENST00000541169 GLRA3O75311 464 aa18.01■□□□□ 0.47
VPS33A-205ENST00000541169 OR2B3O76000 313 aa18.01■□□□□ 0.47
VPS33A-205ENST00000541169 WDR47O94967 919 aa18.01■□□□□ 0.47
VPS33A-205ENST00000541169 C1QTNF9P0C862 333 aa18.01■□□□□ 0.47
VPS33A-205ENST00000541169 LIPCP11150 499 aa18.01■□□□□ 0.47
VPS33A-205ENST00000541169 GFAPP14136 432 aa18.01■□□□□ 0.47
VPS33A-205ENST00000541169 NCF1P14598 390 aaPredicted RBP18.01■□□□□ 0.47
VPS33A-205ENST00000541169 TAC1P20366 129 aa18.01■□□□□ 0.47
VPS33A-205ENST00000541169 GLRBP48167 497 aa18.01■□□□□ 0.47
VPS33A-205ENST00000541169 GABRA4P48169 554 aa18.01■□□□□ 0.47
VPS33A-205ENST00000541169 ATP1A2P50993 1020 aa18.01■□□□□ 0.47
VPS33A-205ENST00000541169 ARSFP54793 590 aa18.01■□□□□ 0.47
VPS33A-205ENST00000541169 FAM214AQ32MH5 1076 aa18.01■□□□□ 0.47
VPS33A-205ENST00000541169 LRIG3Q6UXM1 1119 aa18.01■□□□□ 0.47
VPS33A-205ENST00000541169 TMEM126BQ8IUX1 230 aa18.01■□□□□ 0.47
VPS33A-205ENST00000541169 SPNS2Q8IVW8 549 aa18.01■□□□□ 0.47
VPS33A-205ENST00000541169 IQCKQ8N0W5 287 aa18.01■□□□□ 0.47
VPS33A-205ENST00000541169 ESX1Q8N693 406 aa18.01■□□□□ 0.47
VPS33A-205ENST00000541169 OR4K1Q8NGD4 311 aa18.01■□□□□ 0.47
VPS33A-205ENST00000541169 MDM1Q8TC05 714 aa18.01■□□□□ 0.47
VPS33A-205ENST00000541169 SLC5A11Q8WWX8 675 aa18.01■□□□□ 0.47
VPS33A-205ENST00000541169 ZCCHC14Q8WYQ9 949 aaKnown RBP18.01■□□□□ 0.47
VPS33A-205ENST00000541169 RERGQ96A58 199 aaPredicted RBP18.01■□□□□ 0.47
VPS33A-205ENST00000541169 ALKBH8Q96BT7 664 aaKnown RBP18.01■□□□□ 0.47
VPS33A-205ENST00000541169 PYCR2Q96C36 320 aa18.01■□□□□ 0.47
VPS33A-205ENST00000541169 SEC16BQ96JE7 1060 aa18.01■□□□□ 0.47
VPS33A-205ENST00000541169 SELENOSQ9BQE4 189 aa18.01■□□□□ 0.47
VPS33A-205ENST00000541169 SARGQ9BW04 601 aa18.01■□□□□ 0.47
VPS33A-205ENST00000541169 NLNQ9BYT8 704 aa18.01■□□□□ 0.47
VPS33A-205ENST00000541169 UNKQ9C0B0 810 aaKnown RBP18.01■□□□□ 0.47
VPS33A-205ENST00000541169 KLHL25Q9H0H3 589 aa18.01■□□□□ 0.47
VPS33A-205ENST00000541169 PELI2Q9HAT8 420 aa18.01■□□□□ 0.47
VPS33A-205ENST00000541169 FAM60AQ9NP50 221 aa18.01■□□□□ 0.47
VPS33A-205ENST00000541169 SLC6A20Q9NP91 592 aa18.01■□□□□ 0.47
VPS33A-205ENST00000541169 ABCF3Q9NUQ8 709 aa18.01■□□□□ 0.47
VPS33A-205ENST00000541169 DNAJC11Q9NVH1 559 aa18.01■□□□□ 0.47
VPS33A-205ENST00000541169 PILRAQ9UKJ1 303 aa18.01■□□□□ 0.47
VPS33A-205ENST00000541169 GRID1Q9ULK0 1009 aa18.01■□□□□ 0.47
VPS33A-205ENST00000541169 SLC22A14Q9Y267 594 aa18.01■□□□□ 0.47
VPS33A-205ENST00000541169 CEP295Q9C0D2 2601 aa18.01■□□□□ 0.47
VPS33A-205ENST00000541169 PMS2P1A4D2B8 440 aa18■□□□□ 0.47
VPS33A-205ENST00000541169 SMIM23A6NLE4 172 aa18■□□□□ 0.47
VPS33A-205ENST00000541169 STX16-NPEPL1H3BU86 382 aa18■□□□□ 0.47
VPS33A-205ENST00000541169 H7BY64 318 aa18■□□□□ 0.47
VPS33A-205ENST00000541169 STX16O14662 325 aa18■□□□□ 0.47
VPS33A-205ENST00000541169 CLGNO14967 610 aa18■□□□□ 0.47
VPS33A-205ENST00000541169 H2AFYO75367 372 aaKnown RBP18■□□□□ 0.47
VPS33A-205ENST00000541169 KATNA1O75449 491 aa18■□□□□ 0.47
VPS33A-205ENST00000541169 SCRG1O75711 98 aa18■□□□□ 0.47
VPS33A-205ENST00000541169 CCNYL3P0C7X3 344 aa18■□□□□ 0.47
VPS33A-205ENST00000541169 PYGBP11216 843 aa18■□□□□ 0.47
VPS33A-205ENST00000541169 MTHFD2P13995 350 aa18■□□□□ 0.47
VPS33A-205ENST00000541169 GSTM2P28161 218 aa18■□□□□ 0.47
VPS33A-205ENST00000541169 KCNC1P48547 511 aa18■□□□□ 0.47
VPS33A-205ENST00000541169 NAA20P61599 178 aa18■□□□□ 0.47
VPS33A-205ENST00000541169 PCDH1Q08174 1060 aa18■□□□□ 0.47
VPS33A-205ENST00000541169 CDC16Q13042 620 aa18■□□□□ 0.47
VPS33A-205ENST00000541169 GRM7Q14831 915 aa18■□□□□ 0.47
VPS33A-205ENST00000541169 SETDB1Q15047 1291 aa18■□□□□ 0.47
VPS33A-205ENST00000541169 PDK4Q16654 411 aa18■□□□□ 0.47
VPS33A-205ENST00000541169 ZXDCQ2QGD7 858 aaPredicted RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms