RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 ANKMY1Q9P2S6 941 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 TBK1Q9UHD2 729 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 TLK1Q9UKI8 766 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 ACSL6Q9UKU0 697 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 RNF112Q9ULX5 631 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 SH2B3Q9UQQ2 575 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 KLHL20Q9Y2M5 609 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 B3GALT1Q9Y5Z6 326 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 EPG5Q9HCE0 2579 aa6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 ANKRD11Q6UB99 2663 aaPredicted RBP6.71□□□□□ -1.34
LPCAT3-209ENST00000540060 NUP210LQ5VU65 1888 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 OR2A25A4D2G3 310 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 CCDC151A5D8V7 595 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 TMEM8BA6NDV4 472 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 NCF1BA6NI72 391 aaPredicted RBP6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 SMIM23A6NLE4 172 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 NCF1CA8MVU1 366 aaPredicted RBP6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 TARM1B6A8C7 271 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 H3BMH7 237 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 UBXN8O00124 270 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 POLR1CO15160 346 aaPredicted RBP6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 TAPBPO15533 448 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 CTIFO43310 598 aaKnown RBP6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 CTSVO60911 334 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 TIAF1O95411 115 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 FGF5P12034 268 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 COL6A2P12110 1019 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 MTHFD2P13995 350 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 NCF1P14598 390 aaPredicted RBP6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 GGT5P36269 586 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 KCNC1P48547 511 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 PCBP4P57723 403 aaKnown RBP6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 ABATP80404 500 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 PRDX1Q06830 199 aaKnown RBP6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 NAE1Q13564 534 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 IL11RAQ14626 422 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 NAA25Q14CX7 972 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 ACAP2Q15057 778 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 TSNAXIP1Q2TAA8 658 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 C18orf21Q32NC0 220 aaPredicted RBP6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 PTCHD3Q3KNS1 767 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 CDKL4Q5MAI5 379 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 TMTC4Q5T4D3 741 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 DCAF12Q5T6F0 453 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 THEMIS2Q5TEJ8 643 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 TMEM164Q5U3C3 297 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 ZNF425Q6IV72 752 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 CAPN13Q6MZZ7 669 aaPredicted RBP6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 KLC3Q6P597 504 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 FIGLAQ6QHK4 219 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 CEACAM20Q6UY09 585 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 PAQR7Q86WK9 346 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 PPP1R3BQ86XI6 285 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 PROSER1Q86XN7 944 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 GPSM1Q86YR5 675 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 KLHDC8AQ8IYD2 350 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 CYP4X1Q8N118 509 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 TCAIMQ8N3R3 496 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 RIBC1Q8N443 379 aaPredicted RBP6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 DNAJC22Q8N4W6 341 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 OR1L3Q8NH93 324 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 SNIP1Q8TAD8 396 aaKnown RBP6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 STAG3L4Q8TBR4 150 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 ACMSDQ8TDX5 336 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 UBTD2Q8WUN7 234 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 ZCCHC14Q8WYQ9 949 aaKnown RBP6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 EXT2Q93063 718 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 ZUFSPQ96AP4 578 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 CABS1Q96KC9 395 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 OR4K3Q96R72 315 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 PLCD4Q9BRC7 762 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 ZPBPQ9BS86 351 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 DPH7Q9BTV6 452 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 ASPSCR1Q9BZE9 553 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 PCBD2Q9H0N5 130 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 FANCEQ9HB96 536 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 ENAMQ9NRM1 1142 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 ABCF3Q9NUQ8 709 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 INTS7Q9NVH2 962 aaKnown RBP6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 CD274Q9NZQ7 290 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 XPR1Q9UBH6 696 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 LGALS13Q9UHV8 139 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 RARRES3Q9UL19 164 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 PLAAQ9Y263 795 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 ITPR1Q14643 2758 aa6.7□□□□□ -1.34
LPCAT3-209ENST00000540060 MGAQ8IWI9 3026 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 AHCTF1Q8WYP5 2266 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 NBEAQ8NFP9 2946 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 A0A1W2PPM1 405 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 SYCE1LA8MT33 242 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 FOXO6A8MYZ6 492 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 SUPT3HB4E1H0 165 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 TMEM150CB9EJG8 249 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 GOLGA8RI6L899 631 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 HAT1O14929 419 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 MAP3K7O43318 606 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 KLK8O60259 260 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 ERLIN1O75477 346 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms