RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 TSTD1Q8NFU3 115 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 FAM110BQ8TC76 370 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 SMPDL3AQ92484 453 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 CNDP2Q96KP4 475 aaKnown RBP6.32□□□□□ -1.4
LSAMP-207ENST00000539563 SP140LQ9H930 580 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 TBC1D17Q9HA65 648 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 UGT1A7Q9HAW7 530 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 UGT1A10Q9HAW8 530 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 UGT1A8Q9HAW9 530 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 TLR9Q9NR96 1032 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 KCPQ6ZWJ8 1503 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 CDK5RAP2Q96SN8 1893 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 A0A1W2PQ45 241 aaPredicted RBP6.32□□□□□ -1.4
LSAMP-207ENST00000539563 A0A1W2PQY0 241 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 NOBOXO60393 691 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 APOC1P02654 83 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 UGT1A6P19224 532 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 UGT1A1P22309 533 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 UGT1A4P22310 534 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 PRKCHP24723 683 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 MAGEA11P43364 429 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 ATP4BP51164 291 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 DGKEP52429 567 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 RABGGTBP53611 331 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 MTTPP55157 894 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 SATL1Q86VE3 508 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 ZC3HC1Q86WB0 502 aaKnown RBP6.32□□□□□ -1.4
LSAMP-207ENST00000539563 SLC22A15Q8IZD6 547 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 FAM46DQ8NEK8 389 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 GRPEL2Q8TAA5 225 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 OSTF1Q92882 214 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 PMEPA1Q969W9 287 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 KCTD7Q96MP8 289 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 SLC2A4RGQ9NR83 387 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 ZCCHC3Q9NUD5 404 aaKnown RBP6.32□□□□□ -1.4
LSAMP-207ENST00000539563 FBXL12Q9NXK8 326 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 AASSQ9UDR5 926 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 SLC22A14Q9Y267 594 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 FKBP7Q9Y680 259 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 AKAP8O43823 692 aaKnown RBP6.32□□□□□ -1.4
LSAMP-207ENST00000539563 OAS1P00973 400 aaKnown RBP6.32□□□□□ -1.4
LSAMP-207ENST00000539563 ZNF20P17024 532 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 ACSL1P33121 698 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 MLLT6P55198 1093 aaPredicted RBP6.32□□□□□ -1.4
LSAMP-207ENST00000539563 ST3GAL3Q11203 375 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 DCAF12L1Q5VU92 463 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 TMEM214Q6NUQ4 689 aaKnown RBP6.32□□□□□ -1.4
LSAMP-207ENST00000539563 FBXL22Q6P050 247 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 OR6K6Q8NGW6 343 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 BPIFB1Q8TDL5 484 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 MOAP1Q96BY2 351 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 PPP1R14BQ96C90 147 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 CD244Q9BZW8 370 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 MOV10Q9HCE1 1003 aaKnown RBP6.32□□□□□ -1.4
LSAMP-207ENST00000539563 ZBTB26Q9HCK0 441 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 HHATLQ9HCP6 504 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 LOC100130705A0A1B0GUX0 176 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 TCRBV7S3A2A0A539 114 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 MT-ND1P03886 318 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 LINGO3P0C6S8 592 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 CCL5P13501 91 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 ACP5P13686 325 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 POU2F1P14859 743 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 AOC1P19801 751 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 ECHS1P30084 290 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 EIF5AP63241 154 aaKnown RBP6.32□□□□□ -1.4
LSAMP-207ENST00000539563 INCA1Q0VD86 236 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 MS4A13Q5J8X5 152 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 EGFLAMQ63HQ2 1017 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 TNFAIP8L2Q6P589 184 aaPredicted RBP6.32□□□□□ -1.4
LSAMP-207ENST00000539563 SLC9B2Q86UD5 537 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 SIPA1Q96FS4 1042 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 COL21A1Q96P44 957 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 RIOK2Q9BVS4 552 aaKnown RBP6.32□□□□□ -1.4
LSAMP-207ENST00000539563 TDP1Q9NUW8 608 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 NLGN3Q9NZ94 848 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 FAM172BPA6NC97 362 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 WASHC1A8K0Z3 465 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 A8MT66 165 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 WASH3PC4AMC7 463 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 J3KR12 359 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 TNFRSF10BO14763 440 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 RLN2P04090 185 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 MATN1P21941 496 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 APLP1P51693 650 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 TSPAN5P62079 268 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 IDNKQ5T6J7 187 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 CWF19L1Q69YN2 538 aaKnown RBP6.32□□□□□ -1.4
LSAMP-207ENST00000539563 WASH2PQ6VEQ5 465 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 LINGO2Q7L985 606 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 GOLGA7Q7Z5G4 137 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 IQCHQ86VS3 1027 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 DCAF4L2Q8NA75 395 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 OR52E4Q8NGH9 312 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 THRSPQ92748 146 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 NKD1Q969G9 470 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 ZNF641Q96N77 438 aaPredicted RBP6.32□□□□□ -1.4
LSAMP-207ENST00000539563 CDK15Q96Q40 435 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 MND1Q9BWT6 205 aa6.32□□□□□ -1.4
LSAMP-207ENST00000539563 RC3H2Q9HBD1 1191 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms