RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 GLULP15104 373 aa16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 FUT4P22083 530 aa16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 GPX3P22352 226 aa16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 ITPKAP23677 461 aa16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 NME5P56597 212 aa16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 PPP2CBP62714 309 aa16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 PPP2CAP67775 309 aa16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 C16orf72Q14CZ0 275 aa16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 ZBED5Q49AG3 693 aa16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 XKR7Q5GH72 579 aa16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 TMEM31Q5JXX7 168 aa16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 INTS11Q5TA45 600 aaKnown RBP16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 KIAA1161Q6NSJ0 714 aa16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 TTC33Q6PID6 262 aaPredicted RBP16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 IL27RAQ6UWB1 636 aa16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 EPHX4Q8IUS5 362 aa16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 GPATCH1Q9BRR8 931 aaKnown RBP16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 NTMT1Q9BV86 223 aa16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 AURKCQ9UQB9 309 aa16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 WDR37Q9Y2I8 494 aa16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 MGAT4DA6NG13 374 aa16.55■□□□□ 0.24
PCDHB17P-201ENST00000539533 BBIP1A8MTZ0 92 aa16.55■□□□□ 0.24
PCDHB17P-201ENST00000539533 NME4O00746 187 aa16.55■□□□□ 0.24
PCDHB17P-201ENST00000539533 SLC31A1O15431 190 aa16.55■□□□□ 0.24
PCDHB17P-201ENST00000539533 CATP04040 527 aaKnown RBP16.55■□□□□ 0.24
PCDHB17P-201ENST00000539533 MYF6P23409 242 aa16.55■□□□□ 0.24
PCDHB17P-201ENST00000539533 ABRAXAS2Q15018 415 aa16.55■□□□□ 0.24
PCDHB17P-201ENST00000539533 Q6ZSR9 355 aa16.55■□□□□ 0.24
PCDHB17P-201ENST00000539533 EFL1Q7Z2Z2 1120 aaKnown RBP16.55■□□□□ 0.24
PCDHB17P-201ENST00000539533 GPR180Q86V85 440 aa16.55■□□□□ 0.24
PCDHB17P-201ENST00000539533 HORMAD1Q86X24 394 aa16.55■□□□□ 0.24
PCDHB17P-201ENST00000539533 FLCNQ8NFG4 579 aa16.55■□□□□ 0.24
PCDHB17P-201ENST00000539533 TNIP2Q8NFZ5 429 aa16.55■□□□□ 0.24
PCDHB17P-201ENST00000539533 HLA-CQ95604 372 aa16.55■□□□□ 0.24
PCDHB17P-201ENST00000539533 FOPNLQ96NB1 174 aa16.55■□□□□ 0.24
PCDHB17P-201ENST00000539533 TRIM15Q9C019 465 aa16.55■□□□□ 0.24
PCDHB17P-201ENST00000539533 IL1RL2Q9HB29 575 aa16.55■□□□□ 0.24
PCDHB17P-201ENST00000539533 PFDN4Q9NQP4 134 aa16.55■□□□□ 0.24
PCDHB17P-201ENST00000539533 INIPQ9NRY2 104 aa16.55■□□□□ 0.24
PCDHB17P-201ENST00000539533 ZNHIT2Q9UHR6 403 aa16.55■□□□□ 0.24
PCDHB17P-201ENST00000539533 SCML1Q9UN30 329 aa16.55■□□□□ 0.24
PCDHB17P-201ENST00000539533 TCRBV21S2A2A0A5A6 115 aa16.55■□□□□ 0.24
PCDHB17P-201ENST00000539533 DHRS12A0PJE2 317 aa16.55■□□□□ 0.24
PCDHB17P-201ENST00000539533 NR5A2O00482 541 aa16.55■□□□□ 0.24
PCDHB17P-201ENST00000539533 FUCA1P04066 466 aa16.55■□□□□ 0.24
PCDHB17P-201ENST00000539533 ACADMP11310 421 aa16.55■□□□□ 0.24
PCDHB17P-201ENST00000539533 LBPP18428 481 aa16.55■□□□□ 0.24
PCDHB17P-201ENST00000539533 HMOX2P30519 316 aa16.55■□□□□ 0.24
PCDHB17P-201ENST00000539533 PFN3P60673 137 aa16.55■□□□□ 0.24
PCDHB17P-201ENST00000539533 PHEXP78562 749 aa16.55■□□□□ 0.24
PCDHB17P-201ENST00000539533 TDGQ13569 410 aa16.55■□□□□ 0.24
PCDHB17P-201ENST00000539533 FBXO43Q4G163 708 aa16.55■□□□□ 0.24
PCDHB17P-201ENST00000539533 EOGTQ5NDL2 527 aa16.55■□□□□ 0.24
PCDHB17P-201ENST00000539533 NCCRP1Q6ZVX7 275 aaPredicted RBP16.55■□□□□ 0.24
PCDHB17P-201ENST00000539533 LRRC70Q7Z2Q7 622 aa16.55■□□□□ 0.24
PCDHB17P-201ENST00000539533 FBXL8Q96CD0 374 aa16.55■□□□□ 0.24
PCDHB17P-201ENST00000539533 PKP4Q99569 1192 aa16.55■□□□□ 0.24
PCDHB17P-201ENST00000539533 ADI1Q9BV57 179 aa16.55■□□□□ 0.24
PCDHB17P-201ENST00000539533 AGPAT4Q9NRZ5 378 aa16.55■□□□□ 0.24
PCDHB17P-201ENST00000539533 MAP10Q9P2G4 905 aa16.55■□□□□ 0.24
PCDHB17P-201ENST00000539533 ABCD2Q9UBJ2 740 aa16.55■□□□□ 0.24
PCDHB17P-201ENST00000539533 AQP12BA6NM10 295 aa16.54■□□□□ 0.24
PCDHB17P-201ENST00000539533 ZNF701M0R085 212 aaPredicted RBP16.54■□□□□ 0.24
PCDHB17P-201ENST00000539533 C1orf105O95561 183 aa16.54■□□□□ 0.24
PCDHB17P-201ENST00000539533 SLC16A8O95907 504 aa16.54■□□□□ 0.24
PCDHB17P-201ENST00000539533 EBLN1P0CF75 366 aa16.54■□□□□ 0.24
PCDHB17P-201ENST00000539533 PRR35P0CG20 571 aa16.54■□□□□ 0.24
PCDHB17P-201ENST00000539533 SRFP11831 508 aa16.54■□□□□ 0.24
PCDHB17P-201ENST00000539533 PORP16435 677 aaPredicted RBP16.54■□□□□ 0.24
PCDHB17P-201ENST00000539533 ACSL1P33121 698 aa16.54■□□□□ 0.24
PCDHB17P-201ENST00000539533 DIO3P55073 304 aa16.54■□□□□ 0.24
PCDHB17P-201ENST00000539533 CTBSQ01459 385 aa16.54■□□□□ 0.24
PCDHB17P-201ENST00000539533 KIF19Q2TAC6 998 aa16.54■□□□□ 0.24
PCDHB17P-201ENST00000539533 Q6ZS52 159 aa16.54■□□□□ 0.24
PCDHB17P-201ENST00000539533 AMZ2Q86W34 360 aa16.54■□□□□ 0.24
PCDHB17P-201ENST00000539533 SPPL2CQ8IUH8 684 aa16.54■□□□□ 0.24
PCDHB17P-201ENST00000539533 AQP12AQ8IXF9 295 aa16.54■□□□□ 0.24
PCDHB17P-201ENST00000539533 ADAMTS16Q8TE57 1224 aa16.54■□□□□ 0.24
PCDHB17P-201ENST00000539533 GIPC3Q8TF64 312 aa16.54■□□□□ 0.24
PCDHB17P-201ENST00000539533 C12orf43Q96C57 262 aaKnown RBP16.54■□□□□ 0.24
PCDHB17P-201ENST00000539533 CCDC138Q96M89 665 aa16.54■□□□□ 0.24
PCDHB17P-201ENST00000539533 HOPXQ9BPY8 73 aaPredicted RBP16.54■□□□□ 0.24
PCDHB17P-201ENST00000539533 FARSBQ9NSD9 589 aaKnown RBP16.54■□□□□ 0.24
PCDHB17P-201ENST00000539533 INTS7Q9NVH2 962 aaKnown RBP16.54■□□□□ 0.24
PCDHB17P-201ENST00000539533 FZD4Q9ULV1 537 aa16.54■□□□□ 0.24
PCDHB17P-201ENST00000539533 MMP17Q9ULZ9 603 aa16.54■□□□□ 0.24
PCDHB17P-201ENST00000539533 NCKAP1Q9Y2A7 1128 aa16.54■□□□□ 0.24
PCDHB17P-201ENST00000539533 FAM149AA5PLN7 773 aa16.53■□□□□ 0.24
PCDHB17P-201ENST00000539533 IGFALSP35858 605 aa16.53■□□□□ 0.24
PCDHB17P-201ENST00000539533 TFF2Q03403 129 aa16.53■□□□□ 0.24
PCDHB17P-201ENST00000539533 MERTKQ12866 999 aa16.53■□□□□ 0.24
PCDHB17P-201ENST00000539533 AGTRAPQ6RW13 159 aa16.53■□□□□ 0.24
PCDHB17P-201ENST00000539533 USP30Q70CQ3 517 aa16.53■□□□□ 0.24
PCDHB17P-201ENST00000539533 LRRTM4Q86VH4 590 aa16.53■□□□□ 0.24
PCDHB17P-201ENST00000539533 ACTR8Q9H981 624 aa16.53■□□□□ 0.24
PCDHB17P-201ENST00000539533 SLC2A4RGQ9NR83 387 aa16.53■□□□□ 0.24
PCDHB17P-201ENST00000539533 STOX2Q9P2F5 926 aaPredicted RBP16.53■□□□□ 0.24
PCDHB17P-201ENST00000539533 KLQ9UEF7 1012 aa16.53■□□□□ 0.24
PCDHB17P-201ENST00000539533 PRAMEF4O60810 478 aa16.53■□□□□ 0.24
PCDHB17P-201ENST00000539533 VPS4BO75351 444 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms