RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 HNMTP50135 292 aa14.12□□□□□ -0.15
CDCA3-207ENST00000538862 EPHB3P54753 998 aa14.12□□□□□ -0.15
CDCA3-207ENST00000538862 ZXDBP98169 803 aa14.12□□□□□ -0.15
CDCA3-207ENST00000538862 VAC14Q08AM6 782 aa14.12□□□□□ -0.15
CDCA3-207ENST00000538862 BNIP3Q12983 259 aa14.12□□□□□ -0.15
CDCA3-207ENST00000538862 MEP1AQ16819 746 aa14.12□□□□□ -0.15
CDCA3-207ENST00000538862 ZNF691Q5VV52 312 aa14.12□□□□□ -0.15
CDCA3-207ENST00000538862 TSPAN33Q86UF1 283 aa14.12□□□□□ -0.15
CDCA3-207ENST00000538862 ZSWIM9Q86XI8 627 aa14.12□□□□□ -0.15
CDCA3-207ENST00000538862 DCP2Q8IU60 420 aaKnown RBP14.12□□□□□ -0.15
CDCA3-207ENST00000538862 ZC3H7AQ8IWR0 971 aaKnown RBP14.12□□□□□ -0.15
CDCA3-207ENST00000538862 HS3ST5Q8IZT8 346 aa14.12□□□□□ -0.15
CDCA3-207ENST00000538862 CPXM2Q8N436 756 aa14.12□□□□□ -0.15
CDCA3-207ENST00000538862 L3MBTL4Q8NA19 623 aa14.12□□□□□ -0.15
CDCA3-207ENST00000538862 SMYD1Q8NB12 490 aa14.12□□□□□ -0.15
CDCA3-207ENST00000538862 TTC16Q8NEE8 873 aa14.12□□□□□ -0.15
CDCA3-207ENST00000538862 OR2AP1Q8NGE2 309 aa14.12□□□□□ -0.15
CDCA3-207ENST00000538862 CLHC1Q8NHS4 586 aa14.12□□□□□ -0.15
CDCA3-207ENST00000538862 TANKQ92844 425 aa14.12□□□□□ -0.15
CDCA3-207ENST00000538862 ABTB1Q969K4 478 aaPredicted RBP14.12□□□□□ -0.15
CDCA3-207ENST00000538862 SCRN2Q96FV2 425 aa14.12□□□□□ -0.15
CDCA3-207ENST00000538862 MAGEB10Q96LZ2 347 aaPredicted RBP14.12□□□□□ -0.15
CDCA3-207ENST00000538862 NECTIN4Q96NY8 510 aa14.12□□□□□ -0.15
CDCA3-207ENST00000538862 HHIPQ96QV1 700 aa14.12□□□□□ -0.15
CDCA3-207ENST00000538862 ELOVL6Q9H5J4 265 aa14.12□□□□□ -0.15
CDCA3-207ENST00000538862 DPP7Q9UHL4 492 aa14.12□□□□□ -0.15
CDCA3-207ENST00000538862 ZNF510Q9Y2H8 683 aa14.12□□□□□ -0.15
CDCA3-207ENST00000538862 NAALAD2Q9Y3Q0 740 aa14.12□□□□□ -0.15
CDCA3-207ENST00000538862 CPQQ9Y646 472 aa14.12□□□□□ -0.15
CDCA3-207ENST00000538862 PLXNB3Q9ULL4 1909 aa14.12□□□□□ -0.15
CDCA3-207ENST00000538862 IGLV3-16A0A075B6K0 115 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 NPIPB15A6NHN6 443 aaPredicted RBP14.11□□□□□ -0.15
CDCA3-207ENST00000538862 CCL16O15467 120 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 CCDC159P0C7I6 412 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 OR56A5P0C7T3 313 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 MPC1LP0DKB6 136 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 ITGAMP11215 1152 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 ZNF12P17014 697 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 ITIH1P19827 911 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 CCR7P32248 378 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 PLA2G16P53816 162 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 C21orf59P57076 290 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 LMAN2Q12907 356 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 GBX1Q14549 363 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 CTU2Q2VPK5 515 aaKnown RBP14.11□□□□□ -0.15
CDCA3-207ENST00000538862 MPPE1Q53F39 396 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 DGKKQ5KSL6 1271 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 ZDHHC20Q5W0Z9 365 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 SHQ1Q6PI26 577 aaKnown RBP14.11□□□□□ -0.15
CDCA3-207ENST00000538862 XKR5Q6UX68 686 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 UBE2R2Q712K3 238 aaPredicted RBP14.11□□□□□ -0.15
CDCA3-207ENST00000538862 TMEM179BQ7Z7N9 219 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 BPIFB6Q8NFQ5 453 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 FIBINQ8TAL6 211 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 FBLIM1Q8WUP2 373 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 ZNF566Q969W8 418 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 ASIC4Q96FT7 647 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 CCDC138Q96M89 665 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 GABARAPL1Q9H0R8 117 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 RHBDL2Q9NX52 303 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 TMEFF2Q9UIK5 374 aaPredicted RBP14.11□□□□□ -0.15
CDCA3-207ENST00000538862 SAMD4AQ9UPU9 718 aaKnown RBP14.11□□□□□ -0.15
CDCA3-207ENST00000538862 SNX5Q9Y5X3 404 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 NOTCH4Q99466 2003 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 FAM86C2PA6NEL3 165 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 NUAK1O60285 661 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 FOXD2O60548 495 aaPredicted RBP14.11□□□□□ -0.15
CDCA3-207ENST00000538862 CCNDBP1O95273 360 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 HTR1AP08908 422 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 HIST1H2AGP0C0S8 130 aaPredicted RBP14.11□□□□□ -0.15
CDCA3-207ENST00000538862 ZNF182P17025 639 aaPredicted RBP14.11□□□□□ -0.15
CDCA3-207ENST00000538862 HIST1H2ADP20671 130 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 AOAHP28039 575 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 SLC6A12P48065 614 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 TRPC1P48995 793 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 SNRPD1P62314 119 aaKnown RBP14.11□□□□□ -0.15
CDCA3-207ENST00000538862 NTHL1P78549 312 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 HTR3DQ70Z44 454 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 DET1Q7L5Y6 550 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 SERPINA11Q86U17 422 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 TCEAL8Q8IYN2 117 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 PGBD3Q8N328 593 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 ASB11Q8WXH4 323 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 BHMTQ93088 406 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 MUL1Q969V5 352 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 ECHDC3Q96DC8 303 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 PLEKHA8Q96JA3 519 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 HIST1H2AHQ96KK5 128 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 HIST1H2AJQ99878 128 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 INPP5KQ9BT40 448 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 H2AFJQ9BTM1 129 aa14.11□□□□□ -0.15
CDCA3-207ENST00000538862 TRIT1Q9H3H1 467 aaKnown RBP14.11□□□□□ -0.15
CDCA3-207ENST00000538862 ZNF334Q9HCZ1 680 aaPredicted RBP14.11□□□□□ -0.15
CDCA3-207ENST00000538862 DNAAF2Q9NVR5 837 aaKnown RBP14.11□□□□□ -0.15
CDCA3-207ENST00000538862 OBSL1O75147 1896 aa14.1□□□□□ -0.15
CDCA3-207ENST00000538862 A8MX80 341 aa14.1□□□□□ -0.15
CDCA3-207ENST00000538862 M0QX08 132 aa14.1□□□□□ -0.15
CDCA3-207ENST00000538862 SLC16A5O15375 505 aa14.1□□□□□ -0.15
CDCA3-207ENST00000538862 MAGEB3O15480 346 aa14.1□□□□□ -0.15
CDCA3-207ENST00000538862 CBFA2T3O75081 653 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms