RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 RWDD2BP57060 319 aa13.3□□□□□ -0.28
SMARCA4-206ENST00000538456 ARF3P61204 181 aaPredicted RBP13.3□□□□□ -0.28
SMARCA4-206ENST00000538456 PCOLCEQ15113 449 aa13.3□□□□□ -0.28
SMARCA4-206ENST00000538456 SYT16Q17RD7 645 aa13.3□□□□□ -0.28
SMARCA4-206ENST00000538456 PRTGQ2VWP7 1150 aa13.3□□□□□ -0.28
SMARCA4-206ENST00000538456 FASTKD1Q53R41 847 aaKnown RBP13.3□□□□□ -0.28
SMARCA4-206ENST00000538456 TSTD2Q5T7W7 516 aa13.3□□□□□ -0.28
SMARCA4-206ENST00000538456 NCCRP1Q6ZVX7 275 aaPredicted RBP13.3□□□□□ -0.28
SMARCA4-206ENST00000538456 ZNF534Q76KX8 674 aa13.3□□□□□ -0.28
SMARCA4-206ENST00000538456 CDH24Q86UP0 819 aa13.3□□□□□ -0.28
SMARCA4-206ENST00000538456 RAB42Q8N4Z0 105 aa13.3□□□□□ -0.28
SMARCA4-206ENST00000538456 AMER3Q8N944 861 aa13.3□□□□□ -0.28
SMARCA4-206ENST00000538456 OR2A1Q8NGT9 310 aa13.3□□□□□ -0.28
SMARCA4-206ENST00000538456 OR4L1Q8NH43 312 aa13.3□□□□□ -0.28
SMARCA4-206ENST00000538456 ALG3Q92685 438 aa13.3□□□□□ -0.28
SMARCA4-206ENST00000538456 RAD51AP1Q96B01 352 aa13.3□□□□□ -0.28
SMARCA4-206ENST00000538456 MTFMTQ96DP5 389 aaKnown RBP13.3□□□□□ -0.28
SMARCA4-206ENST00000538456 MMABQ96EY8 250 aaPredicted RBP13.3□□□□□ -0.28
SMARCA4-206ENST00000538456 ZNF778Q96MU6 729 aa13.3□□□□□ -0.28
SMARCA4-206ENST00000538456 TMEM121Q9BTD3 319 aa13.3□□□□□ -0.28
SMARCA4-206ENST00000538456 DPH7Q9BTV6 452 aa13.3□□□□□ -0.28
SMARCA4-206ENST00000538456 CARD6Q9BX69 1037 aa13.3□□□□□ -0.28
SMARCA4-206ENST00000538456 RNF32Q9H0A6 362 aa13.3□□□□□ -0.28
SMARCA4-206ENST00000538456 C14orf105Q9NVL8 296 aa13.3□□□□□ -0.28
SMARCA4-206ENST00000538456 STMN3Q9NZ72 180 aa13.3□□□□□ -0.28
SMARCA4-206ENST00000538456 MKL2Q9ULH7 1088 aa13.3□□□□□ -0.28
SMARCA4-206ENST00000538456 CDC14AQ9UNH5 594 aa13.3□□□□□ -0.28
SMARCA4-206ENST00000538456 RUVBL1Q9Y265 456 aaKnown RBP13.3□□□□□ -0.28
SMARCA4-206ENST00000538456 PCDHA13Q9Y5I0 950 aa13.3□□□□□ -0.28
SMARCA4-206ENST00000538456 KLK4Q9Y5K2 254 aa13.3□□□□□ -0.28
SMARCA4-206ENST00000538456 A0A1W2PPV9 198 aa13.29□□□□□ -0.28
SMARCA4-206ENST00000538456 OR2A25A4D2G3 310 aa13.29□□□□□ -0.28
SMARCA4-206ENST00000538456 A8MUI8 341 aa13.29□□□□□ -0.28
SMARCA4-206ENST00000538456 AKR1B15C9JRZ8 316 aaPredicted RBP13.29□□□□□ -0.28
SMARCA4-206ENST00000538456 PRPF4O43172 522 aaKnown RBP eCLIP13.29□□□□□ -0.28
SMARCA4-206ENST00000538456 PSMD3O43242 534 aa13.29□□□□□ -0.28
SMARCA4-206ENST00000538456 ZNF189O75820 626 aaPredicted RBP13.29□□□□□ -0.28
SMARCA4-206ENST00000538456 CLDN14O95500 239 aa13.29□□□□□ -0.28
SMARCA4-206ENST00000538456 C1orf105O95561 183 aa13.29□□□□□ -0.28
SMARCA4-206ENST00000538456 GAS8O95995 478 aa13.29□□□□□ -0.28
SMARCA4-206ENST00000538456 ANXA5P08758 320 aa13.29□□□□□ -0.28
SMARCA4-206ENST00000538456 MYBL2P10244 700 aa13.29□□□□□ -0.28
SMARCA4-206ENST00000538456 CETN2P41208 172 aa13.29□□□□□ -0.28
SMARCA4-206ENST00000538456 KIR3DL1P43629 444 aa13.29□□□□□ -0.28
SMARCA4-206ENST00000538456 ST13P50502 369 aaKnown RBP13.29□□□□□ -0.28
SMARCA4-206ENST00000538456 PRAMEP78395 509 aa13.29□□□□□ -0.28
SMARCA4-206ENST00000538456 GTF3C1Q12789 2109 aa13.29□□□□□ -0.28
SMARCA4-206ENST00000538456 CDH17Q12864 832 aa13.29□□□□□ -0.28
SMARCA4-206ENST00000538456 FASTKQ14296 549 aaKnown RBP13.29□□□□□ -0.28
SMARCA4-206ENST00000538456 HKDC1Q2TB90 917 aa13.29□□□□□ -0.28
SMARCA4-206ENST00000538456 ZNF766Q5HY98 468 aa13.29□□□□□ -0.28
SMARCA4-206ENST00000538456 FCRLBQ6BAA4 426 aa13.29□□□□□ -0.28
SMARCA4-206ENST00000538456 PTRHD1Q6GMV3 140 aaKnown RBP13.29□□□□□ -0.28
SMARCA4-206ENST00000538456 LINC00523Q86TU6 105 aa13.29□□□□□ -0.28
SMARCA4-206ENST00000538456 CEP97Q8IW35 865 aa13.29□□□□□ -0.28
SMARCA4-206ENST00000538456 CSNK1A1LQ8N752 337 aa13.29□□□□□ -0.28
SMARCA4-206ENST00000538456 ZNF700Q9H0M5 742 aa13.29□□□□□ -0.28
SMARCA4-206ENST00000538456 SYNPO2LQ9H987 977 aa13.29□□□□□ -0.28
SMARCA4-206ENST00000538456 MARCH4Q9P2E8 410 aaPredicted RBP13.29□□□□□ -0.28
SMARCA4-206ENST00000538456 TEKT2Q9UIF3 430 aa13.29□□□□□ -0.28
SMARCA4-206ENST00000538456 LOC102723996A0A087X1L8 192 aa13.28□□□□□ -0.28
SMARCA4-206ENST00000538456 A0A0A6YYC8 382 aaPredicted RBP13.28□□□□□ -0.28
SMARCA4-206ENST00000538456 IGHV3-20A0A0C4DH32 117 aa13.28□□□□□ -0.28
SMARCA4-206ENST00000538456 A0A0U1RQJ8 604 aa13.28□□□□□ -0.28
SMARCA4-206ENST00000538456 RCCD1A6NED2 376 aa13.28□□□□□ -0.28
SMARCA4-206ENST00000538456 I3L1I5 382 aaPredicted RBP13.28□□□□□ -0.28
SMARCA4-206ENST00000538456 VPS26AO75436 327 aa13.28□□□□□ -0.28
SMARCA4-206ENST00000538456 SEC24DO94855 1032 aaPredicted RBP13.28□□□□□ -0.28
SMARCA4-206ENST00000538456 CMPK1P30085 196 aa13.28□□□□□ -0.28
SMARCA4-206ENST00000538456 PPARGP37231 505 aaPredicted RBP13.28□□□□□ -0.28
SMARCA4-206ENST00000538456 GRIA1P42261 906 aa13.28□□□□□ -0.28
SMARCA4-206ENST00000538456 EFNA3P52797 238 aa13.28□□□□□ -0.28
SMARCA4-206ENST00000538456 NAP1L1P55209 391 aaKnown RBP13.28□□□□□ -0.28
SMARCA4-206ENST00000538456 AP2B1P63010 937 aa13.28□□□□□ -0.28
SMARCA4-206ENST00000538456 MAT1AQ00266 395 aaKnown RBP13.28□□□□□ -0.28
SMARCA4-206ENST00000538456 TSTA3Q13630 321 aaPredicted RBP13.28□□□□□ -0.28
SMARCA4-206ENST00000538456 SPA17Q15506 151 aa13.28□□□□□ -0.28
SMARCA4-206ENST00000538456 TESK1Q15569 626 aa13.28□□□□□ -0.28
SMARCA4-206ENST00000538456 LONRF1Q17RB8 773 aa13.28□□□□□ -0.28
SMARCA4-206ENST00000538456 FBXO42Q6P3S6 717 aa13.28□□□□□ -0.28
SMARCA4-206ENST00000538456 PPP1R21Q6ZMI0 780 aa13.28□□□□□ -0.28
SMARCA4-206ENST00000538456 ZC3H7AQ8IWR0 971 aaKnown RBP13.28□□□□□ -0.28
SMARCA4-206ENST00000538456 BEST3Q8N1M1 668 aa13.28□□□□□ -0.28
SMARCA4-206ENST00000538456 ADAMTS18Q8TE60 1221 aa13.28□□□□□ -0.28
SMARCA4-206ENST00000538456 CHTF18Q8WVB6 975 aa13.28□□□□□ -0.28
SMARCA4-206ENST00000538456 MKKSQ9NPJ1 570 aaPredicted RBP13.28□□□□□ -0.28
SMARCA4-206ENST00000538456 KLHL1Q9NR64 748 aa13.28□□□□□ -0.28
SMARCA4-206ENST00000538456 CATSPERZQ9NTU4 200 aa13.28□□□□□ -0.28
SMARCA4-206ENST00000538456 ANKRD10Q9NXR5 420 aa13.28□□□□□ -0.28
SMARCA4-206ENST00000538456 ANAPC5Q9UJX4 755 aa13.28□□□□□ -0.28
SMARCA4-206ENST00000538456 GOLGA6L9A6NEM1 432 aa13.27□□□□□ -0.29
SMARCA4-206ENST00000538456 PRMT5O14744 637 aaPredicted RBP13.27□□□□□ -0.29
SMARCA4-206ENST00000538456 ZNHIT1O43257 154 aa13.27□□□□□ -0.29
SMARCA4-206ENST00000538456 DIAPH2O60879 1101 aa13.27□□□□□ -0.29
SMARCA4-206ENST00000538456 C8orf89P0DMQ9 161 aa13.27□□□□□ -0.29
SMARCA4-206ENST00000538456 ICAM2P13598 275 aa13.27□□□□□ -0.29
SMARCA4-206ENST00000538456 AGAP20933 346 aa13.27□□□□□ -0.29
SMARCA4-206ENST00000538456 SLC26A3P40879 764 aa13.27□□□□□ -0.29
SMARCA4-206ENST00000538456 TLE4Q04727 773 aa13.27□□□□□ -0.29
SMARCA4-206ENST00000538456 AARS2Q5JTZ9 985 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms