RNA–Protein interactions for RNA: ENST00000536515.5

LGR5-202, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-202ENST00000536515 GABARAPL1Q9H0R8 117 aa12.7□□□□□ -0.38
LGR5-202ENST00000536515 C11orf49Q9H6J7 331 aa12.7□□□□□ -0.38
LGR5-202ENST00000536515 TM9SF3Q9HD45 589 aa12.7□□□□□ -0.38
LGR5-202ENST00000536515 PDP1Q9P0J1 537 aaPredicted RBP12.7□□□□□ -0.38
LGR5-202ENST00000536515 ERVK-11Q9UQG0 969 aa12.7□□□□□ -0.38
LGR5-202ENST00000536515 ZNF106Q9H2Y7 1883 aaKnown RBP12.7□□□□□ -0.38
LGR5-202ENST00000536515 PABPN1LA6NDY0 278 aaKnown RBP12.7□□□□□ -0.38
LGR5-202ENST00000536515 GABARAPO95166 117 aa12.7□□□□□ -0.38
LGR5-202ENST00000536515 KCNK5O95279 499 aa12.7□□□□□ -0.38
LGR5-202ENST00000536515 CPSF4O95639 269 aaKnown RBP12.7□□□□□ -0.38
LGR5-202ENST00000536515 PORP16435 677 aaPredicted RBP12.7□□□□□ -0.38
LGR5-202ENST00000536515 SLC6A12P48065 614 aa12.7□□□□□ -0.38
LGR5-202ENST00000536515 MASP1P48740 699 aa12.7□□□□□ -0.38
LGR5-202ENST00000536515 SLC35A2P78381 396 aa12.7□□□□□ -0.38
LGR5-202ENST00000536515 PTSQ03393 145 aa12.7□□□□□ -0.38
LGR5-202ENST00000536515 ZNF846Q147U1 533 aa12.7□□□□□ -0.38
LGR5-202ENST00000536515 ACOX1Q15067 660 aa12.7□□□□□ -0.38
LGR5-202ENST00000536515 DUOXA1Q1HG43 343 aa12.7□□□□□ -0.38
LGR5-202ENST00000536515 VMACQ2NL98 169 aa12.7□□□□□ -0.38
LGR5-202ENST00000536515 CDKL4Q5MAI5 379 aa12.7□□□□□ -0.38
LGR5-202ENST00000536515 KDM4DQ6B0I6 523 aa12.7□□□□□ -0.38
LGR5-202ENST00000536515 TPRG1Q6ZUI0 275 aa12.7□□□□□ -0.38
LGR5-202ENST00000536515 SERPINA11Q86U17 422 aa12.7□□□□□ -0.38
LGR5-202ENST00000536515 HORMAD1Q86X24 394 aa12.7□□□□□ -0.38
LGR5-202ENST00000536515 SYT12Q8IV01 421 aa12.7□□□□□ -0.38
LGR5-202ENST00000536515 ZZZ3Q8IYH5 903 aa12.7□□□□□ -0.38
LGR5-202ENST00000536515 TTC29Q8NA56 475 aaPredicted RBP12.7□□□□□ -0.38
LGR5-202ENST00000536515 ASB11Q8WXH4 323 aa12.7□□□□□ -0.38
LGR5-202ENST00000536515 GLMNQ92990 594 aa12.7□□□□□ -0.38
LGR5-202ENST00000536515 TOX2Q96NM4 488 aa12.7□□□□□ -0.38
LGR5-202ENST00000536515 C19orf43Q9BQ61 176 aa12.7□□□□□ -0.38
LGR5-202ENST00000536515 BBS2Q9BXC9 721 aa12.7□□□□□ -0.38
LGR5-202ENST00000536515 TRNAU1APQ9NX07 287 aaKnown RBP12.7□□□□□ -0.38
LGR5-202ENST00000536515 CD84Q9UIB8 345 aa12.7□□□□□ -0.38
LGR5-202ENST00000536515 TPRKBQ9Y3C4 175 aa12.7□□□□□ -0.38
LGR5-202ENST00000536515 PCDHGB1Q9Y5G3 927 aa12.7□□□□□ -0.38
LGR5-202ENST00000536515 M0R3G1 203 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 ATP6V1G1O75348 118 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 MTX2O75431 263 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 FKBP9O95302 570 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 FADS2O95864 444 aaKnown RBP12.69□□□□□ -0.38
LGR5-202ENST00000536515 MT-ND2P03891 347 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 FABP3P05413 133 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 OR56A5P0C7T3 313 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 HOXB6P17509 224 aaKnown RBP12.69□□□□□ -0.38
LGR5-202ENST00000536515 PRPH2P23942 346 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 PSMB9P28065 219 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 CSNK1DP48730 415 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 VBP1P61758 197 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 CBX3Q13185 183 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 CHIT1Q13231 466 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 SF1Q15637 639 aaKnown RBP12.69□□□□□ -0.38
LGR5-202ENST00000536515 UGT8Q16880 541 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 TRIM16LQ309B1 348 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 PLEKHG6Q3KR16 790 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 PERM1Q5SV97 790 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 CAPN13Q6MZZ7 669 aaPredicted RBP12.69□□□□□ -0.38
LGR5-202ENST00000536515 NIPAL1Q6NVV3 410 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 SERPINA13PQ6UXR4 307 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 UBE2Q1Q7Z7E8 422 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 SNX29P2Q8IUI4 249 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 BBS7Q8IWZ6 715 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 CLECL1Q8IZS7 167 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 L3MBTL4Q8NA19 623 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 ZFP90Q8TF47 636 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 POP5Q969H6 163 aaKnown RBP12.69□□□□□ -0.38
LGR5-202ENST00000536515 UBE2FQ969M7 185 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 VOPP1Q96AW1 172 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 SCRN2Q96FV2 425 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 DUSP21Q9H596 190 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 SCN3BQ9NY72 215 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 FAM8A1Q9UBU6 413 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 TMED5Q9Y3A6 229 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 SAMHD1Q9Y3Z3 626 aaKnown RBP12.69□□□□□ -0.38
LGR5-202ENST00000536515 PDE4DIPQ5VU43 2346 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 EPN2O95208 641 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 C8GP07360 202 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 CDH3P22223 829 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 DNAJA1P31689 397 aaKnown RBP12.69□□□□□ -0.38
LGR5-202ENST00000536515 KDELR2P33947 212 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 CYP4F8P98187 520 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 DDX39BQ13838 428 aaKnown RBP12.69□□□□□ -0.38
LGR5-202ENST00000536515 KEAP1Q14145 624 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 TPGS2Q68CL5 300 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 RNF168Q8IYW5 571 aaPredicted RBP12.69□□□□□ -0.38
LGR5-202ENST00000536515 TCAIMQ8N3R3 496 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 ZNF540Q8NDQ6 660 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 AUTS2Q8WXX7 1259 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 HSH2DQ96JZ2 352 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 HHIPQ96QV1 700 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 LYSMD1Q96S90 227 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 HMG20AQ9NP66 347 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 RASSF1Q9NS23 344 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 ABCB8Q9NUT2 735 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 DNAJC11Q9NVH1 559 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 KIF17Q9P2E2 1029 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 DAPK2Q9UIK4 370 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 TMPRSS11EQ9UL52 423 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 VPS4AQ9UN37 437 aa12.69□□□□□ -0.38
LGR5-202ENST00000536515 MAGEB17A8MXT2 336 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms