RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 PRDX1Q06830 199 aaKnown RBP13.01□□□□□ -0.33
RPAIN-205ENST00000536255 ABHD18Q0P651 414 aa13.01□□□□□ -0.33
RPAIN-205ENST00000536255 NAE1Q13564 534 aa13.01□□□□□ -0.33
RPAIN-205ENST00000536255 ACAP2Q15057 778 aa13.01□□□□□ -0.33
RPAIN-205ENST00000536255 TGFBIQ15582 683 aa13.01□□□□□ -0.33
RPAIN-205ENST00000536255 PRAMEF13Q5VWM6 474 aa13.01□□□□□ -0.33
RPAIN-205ENST00000536255 KIAA1614Q5VZ46 1190 aa13.01□□□□□ -0.33
RPAIN-205ENST00000536255 ICE2Q659A1 982 aa13.01□□□□□ -0.33
RPAIN-205ENST00000536255 PWWP2BQ6NUJ5 590 aa13.01□□□□□ -0.33
RPAIN-205ENST00000536255 FIGLAQ6QHK4 219 aa13.01□□□□□ -0.33
RPAIN-205ENST00000536255 C6orf15Q6UXA7 325 aaPredicted RBP13.01□□□□□ -0.33
RPAIN-205ENST00000536255 LRRC56Q8IYG6 542 aaPredicted RBP13.01□□□□□ -0.33
RPAIN-205ENST00000536255 CENPLQ8N0S6 344 aaPredicted RBP13.01□□□□□ -0.33
RPAIN-205ENST00000536255 ZSCAN1Q8NBB4 408 aa13.01□□□□□ -0.33
RPAIN-205ENST00000536255 RHEBL1Q8TAI7 183 aa13.01□□□□□ -0.33
RPAIN-205ENST00000536255 KCTD4Q8WVF5 259 aa13.01□□□□□ -0.33
RPAIN-205ENST00000536255 NXNL1Q96CM4 212 aa13.01□□□□□ -0.33
RPAIN-205ENST00000536255 ZNF501Q96CX3 271 aaPredicted RBP13.01□□□□□ -0.33
RPAIN-205ENST00000536255 RNF31Q96EP0 1072 aa13.01□□□□□ -0.33
RPAIN-205ENST00000536255 FCRL4Q96PJ5 515 aa13.01□□□□□ -0.33
RPAIN-205ENST00000536255 UBL7Q96S82 380 aaPredicted RBP13.01□□□□□ -0.33
RPAIN-205ENST00000536255 HAUS8Q9BT25 410 aa13.01□□□□□ -0.33
RPAIN-205ENST00000536255 ACAT2Q9BWD1 397 aa13.01□□□□□ -0.33
RPAIN-205ENST00000536255 KLHL25Q9H0H3 589 aa13.01□□□□□ -0.33
RPAIN-205ENST00000536255 ATG10Q9H0Y0 220 aa13.01□□□□□ -0.33
RPAIN-205ENST00000536255 ALG9Q9H6U8 611 aa13.01□□□□□ -0.33
RPAIN-205ENST00000536255 CNOT10Q9H9A5 744 aaKnown RBP13.01□□□□□ -0.33
RPAIN-205ENST00000536255 IGSF5Q9NSI5 407 aa13.01□□□□□ -0.33
RPAIN-205ENST00000536255 ABCF3Q9NUQ8 709 aa13.01□□□□□ -0.33
RPAIN-205ENST00000536255 ANKMY1Q9P2S6 941 aa13.01□□□□□ -0.33
RPAIN-205ENST00000536255 IKZF3Q9UKT9 509 aa13.01□□□□□ -0.33
RPAIN-205ENST00000536255 KLK4Q9Y5K2 254 aa13.01□□□□□ -0.33
RPAIN-205ENST00000536255 KERAO60938 352 aa13□□□□□ -0.33
RPAIN-205ENST00000536255 IPO13O94829 963 aaKnown RBP13□□□□□ -0.33
RPAIN-205ENST00000536255 RBP1P09455 135 aa13□□□□□ -0.33
RPAIN-205ENST00000536255 LIFP15018 202 aa13□□□□□ -0.33
RPAIN-205ENST00000536255 STAT5AP42229 794 aa13□□□□□ -0.33
RPAIN-205ENST00000536255 GRIA3P42263 894 aa13□□□□□ -0.33
RPAIN-205ENST00000536255 IRF9Q00978 393 aa13□□□□□ -0.33
RPAIN-205ENST00000536255 RHDQ02161 417 aa13□□□□□ -0.33
RPAIN-205ENST00000536255 NAA30Q147X3 362 aaPredicted RBP13□□□□□ -0.33
RPAIN-205ENST00000536255 OR4D1Q15615 310 aa13□□□□□ -0.33
RPAIN-205ENST00000536255 ZC3H12BQ5HYM0 836 aaKnown RBP13□□□□□ -0.33
RPAIN-205ENST00000536255 SULT1C3Q6IMI6 304 aa13□□□□□ -0.33
RPAIN-205ENST00000536255 LCTLQ6UWM7 567 aa13□□□□□ -0.33
RPAIN-205ENST00000536255 ISCA2Q86U28 154 aa13□□□□□ -0.33
RPAIN-205ENST00000536255 LCA5Q86VQ0 697 aa13□□□□□ -0.33
RPAIN-205ENST00000536255 RIBC1Q8N443 379 aaPredicted RBP13□□□□□ -0.33
RPAIN-205ENST00000536255 GALNT6Q8NCL4 622 aa13□□□□□ -0.33
RPAIN-205ENST00000536255 OR56A3Q8NH54 315 aa13□□□□□ -0.33
RPAIN-205ENST00000536255 ACMSDQ8TDX5 336 aa13□□□□□ -0.33
RPAIN-205ENST00000536255 KIAA1143Q96AT1 154 aaPredicted RBP13□□□□□ -0.33
RPAIN-205ENST00000536255 ALKBH8Q96BT7 664 aaKnown RBP13□□□□□ -0.33
RPAIN-205ENST00000536255 PTERQ96BW5 349 aa13□□□□□ -0.33
RPAIN-205ENST00000536255 SGPP1Q9BX95 441 aa13□□□□□ -0.33
RPAIN-205ENST00000536255 ROPN1BQ9BZX4 212 aaPredicted RBP13□□□□□ -0.33
RPAIN-205ENST00000536255 GPN2Q9H9Y4 310 aaPredicted RBP13□□□□□ -0.33
RPAIN-205ENST00000536255 ROPN1Q9HAT0 212 aaPredicted RBP13□□□□□ -0.33
RPAIN-205ENST00000536255 NUDT4Q9NZJ9 180 aa13□□□□□ -0.33
RPAIN-205ENST00000536255 CD274Q9NZQ7 290 aa13□□□□□ -0.33
RPAIN-205ENST00000536255 TBK1Q9UHD2 729 aa13□□□□□ -0.33
RPAIN-205ENST00000536255 SERTAD3Q9UJW9 196 aa13□□□□□ -0.33
RPAIN-205ENST00000536255 MGAQ8IWI9 3026 aa13□□□□□ -0.33
RPAIN-205ENST00000536255 IGSF10Q6WRI0 2623 aa13□□□□□ -0.33
RPAIN-205ENST00000536255 LOC101059948A0A1B0GTJ6 334 aa12.99□□□□□ -0.33
RPAIN-205ENST00000536255 CCDC151A5D8V7 595 aa12.99□□□□□ -0.33
RPAIN-205ENST00000536255 NCF1BA6NI72 391 aaPredicted RBP12.99□□□□□ -0.33
RPAIN-205ENST00000536255 SMIM23A6NLE4 172 aa12.99□□□□□ -0.33
RPAIN-205ENST00000536255 NCF1CA8MVU1 366 aaPredicted RBP12.99□□□□□ -0.33
RPAIN-205ENST00000536255 SUPT3HB4E1H0 165 aa12.99□□□□□ -0.33
RPAIN-205ENST00000536255 TMEM150CB9EJG8 249 aa12.99□□□□□ -0.33
RPAIN-205ENST00000536255 SUPT3HO75486 399 aa12.99□□□□□ -0.33
RPAIN-205ENST00000536255 SCRG1O75711 98 aa12.99□□□□□ -0.33
RPAIN-205ENST00000536255 MT-ND3P03897 115 aa12.99□□□□□ -0.33
RPAIN-205ENST00000536255 NCF1P14598 390 aaPredicted RBP12.99□□□□□ -0.33
RPAIN-205ENST00000536255 KRT15P19012 456 aa12.99□□□□□ -0.33
RPAIN-205ENST00000536255 SLCO1A2P46721 670 aa12.99□□□□□ -0.33
RPAIN-205ENST00000536255 DLG1Q12959 904 aa12.99□□□□□ -0.33
RPAIN-205ENST00000536255 ZIC1Q15915 447 aa12.99□□□□□ -0.33
RPAIN-205ENST00000536255 CDHR3Q6ZTQ4 885 aa12.99□□□□□ -0.33
RPAIN-205ENST00000536255 C17orf64Q86WR6 236 aa12.99□□□□□ -0.33
RPAIN-205ENST00000536255 TMEM126BQ8IUX1 230 aa12.99□□□□□ -0.33
RPAIN-205ENST00000536255 FAM20CQ8IXL6 584 aa12.99□□□□□ -0.33
RPAIN-205ENST00000536255 GPR135Q8IZ08 494 aa12.99□□□□□ -0.33
RPAIN-205ENST00000536255 PDPRQ8NCN5 879 aa12.99□□□□□ -0.33
RPAIN-205ENST00000536255 RHBDF1Q96CC6 855 aa12.99□□□□□ -0.33
RPAIN-205ENST00000536255 DPH7Q9BTV6 452 aa12.99□□□□□ -0.33
RPAIN-205ENST00000536255 RRAGDQ9NQL2 400 aaPredicted RBP12.99□□□□□ -0.33
RPAIN-205ENST00000536255 PCMTD2Q9NV79 361 aa12.99□□□□□ -0.33
RPAIN-205ENST00000536255 WWOXQ9NZC7 414 aa12.99□□□□□ -0.33
RPAIN-205ENST00000536255 SNX7Q9UNH6 387 aa12.99□□□□□ -0.33
RPAIN-205ENST00000536255 PLCL2Q9UPR0 1127 aa12.99□□□□□ -0.33
RPAIN-205ENST00000536255 ERVH48-1M5A8F1 160 aa12.98□□□□□ -0.33
RPAIN-205ENST00000536255 CPNE3O75131 537 aaKnown RBP12.98□□□□□ -0.33
RPAIN-205ENST00000536255 RFPL1O75677 317 aa12.98□□□□□ -0.33
RPAIN-205ENST00000536255 CCNYL3P0C7X3 344 aa12.98□□□□□ -0.33
RPAIN-205ENST00000536255 EZRP15311 586 aaKnown RBP12.98□□□□□ -0.33
RPAIN-205ENST00000536255 GLRBP48167 497 aa12.98□□□□□ -0.33
RPAIN-205ENST00000536255 ITGA1P56199 1179 aa12.98□□□□□ -0.33
RPAIN-205ENST00000536255 PTCHD3Q3KNS1 767 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms