RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 MAU2Q9Y6X3 613 aa12.53□□□□□ -0.4
RTN3-207ENST00000536011 GOLGA6L10A0A0M3HER8 536 aa12.52□□□□□ -0.41
RTN3-207ENST00000536011 A0A1W2PPV9 198 aa12.52□□□□□ -0.41
RTN3-207ENST00000536011 PGRMC1O00264 195 aaKnown RBP12.52□□□□□ -0.41
RTN3-207ENST00000536011 EIF3FO00303 357 aaPredicted RBP12.52□□□□□ -0.41
RTN3-207ENST00000536011 AVILO75366 819 aa12.52□□□□□ -0.41
RTN3-207ENST00000536011 HPP00738 406 aa12.52□□□□□ -0.41
RTN3-207ENST00000536011 ANXA5P08758 320 aa12.52□□□□□ -0.41
RTN3-207ENST00000536011 ZGLP1P0C6A0 271 aa12.52□□□□□ -0.41
RTN3-207ENST00000536011 FDXRP22570 491 aa12.52□□□□□ -0.41
RTN3-207ENST00000536011 FOXL2P58012 376 aa12.52□□□□□ -0.41
RTN3-207ENST00000536011 AP2B1P63010 937 aa12.52□□□□□ -0.41
RTN3-207ENST00000536011 RELAQ04206 551 aa12.52□□□□□ -0.41
RTN3-207ENST00000536011 MRPL49Q13405 166 aaKnown RBP12.52□□□□□ -0.41
RTN3-207ENST00000536011 DSG2Q14126 1118 aa12.52□□□□□ -0.41
RTN3-207ENST00000536011 NR6A1Q15406 480 aa12.52□□□□□ -0.41
RTN3-207ENST00000536011 LONRF1Q17RB8 773 aa12.52□□□□□ -0.41
RTN3-207ENST00000536011 PRTGQ2VWP7 1150 aa12.52□□□□□ -0.41
RTN3-207ENST00000536011 C4orf17Q53FE4 359 aa12.52□□□□□ -0.41
RTN3-207ENST00000536011 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.52□□□□□ -0.41
RTN3-207ENST00000536011 GARNL3Q5VVW2 1013 aa12.52□□□□□ -0.41
RTN3-207ENST00000536011 ICE2Q659A1 982 aa12.52□□□□□ -0.41
RTN3-207ENST00000536011 B3GNTL1Q67FW5 361 aaPredicted RBP12.52□□□□□ -0.41
RTN3-207ENST00000536011 LRRC8EQ6NSJ5 796 aa12.52□□□□□ -0.41
RTN3-207ENST00000536011 SHISA6Q6ZSJ9 500 aa12.52□□□□□ -0.41
RTN3-207ENST00000536011 CENPUQ71F23 418 aa12.52□□□□□ -0.41
RTN3-207ENST00000536011 CAND1Q86VP6 1230 aaKnown RBP12.52□□□□□ -0.41
RTN3-207ENST00000536011 CISD2Q8N5K1 135 aaKnown RBP12.52□□□□□ -0.41
RTN3-207ENST00000536011 CSNK1A1LQ8N752 337 aa12.52□□□□□ -0.41
RTN3-207ENST00000536011 OR11G2Q8NGC1 345 aa12.52□□□□□ -0.41
RTN3-207ENST00000536011 PRR7Q8TB68 274 aa12.52□□□□□ -0.41
RTN3-207ENST00000536011 STT3BQ8TCJ2 826 aa12.52□□□□□ -0.41
RTN3-207ENST00000536011 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.52□□□□□ -0.41
RTN3-207ENST00000536011 SERPINB12Q96P63 405 aa12.52□□□□□ -0.41
RTN3-207ENST00000536011 ASF1BQ9NVP2 202 aa12.52□□□□□ -0.41
RTN3-207ENST00000536011 PLEKHB1Q9UF11 243 aaPredicted RBP12.52□□□□□ -0.41
RTN3-207ENST00000536011 C3orf18Q9UK00 162 aa12.52□□□□□ -0.41
RTN3-207ENST00000536011 PCDHGA10Q9Y5H3 936 aa12.52□□□□□ -0.41
RTN3-207ENST00000536011 MAD1L1Q9Y6D9 718 aa12.52□□□□□ -0.41
RTN3-207ENST00000536011 CCDC88CQ9P219 2028 aa12.52□□□□□ -0.41
RTN3-207ENST00000536011 UNC79Q9P2D8 2635 aa12.51□□□□□ -0.41
RTN3-207ENST00000536011 LOC105369274A0A096LPK9 316 aa12.51□□□□□ -0.41
RTN3-207ENST00000536011 LOC102723532A0A0G2JNH3 316 aa12.51□□□□□ -0.41
RTN3-207ENST00000536011 KRT87PA6NCN2 255 aa12.51□□□□□ -0.41
RTN3-207ENST00000536011 H0YGG7 62 aa12.51□□□□□ -0.41
RTN3-207ENST00000536011 SMAPO00193 183 aa12.51□□□□□ -0.41
RTN3-207ENST00000536011 ZBTB14O43829 449 aa12.51□□□□□ -0.41
RTN3-207ENST00000536011 SLC16A8O95907 504 aa12.51□□□□□ -0.41
RTN3-207ENST00000536011 SYF2O95926 243 aaKnown RBP12.51□□□□□ -0.41
RTN3-207ENST00000536011 MPC1LP0DKB6 136 aa12.51□□□□□ -0.41
RTN3-207ENST00000536011 CXCR2P25025 360 aa12.51□□□□□ -0.41
RTN3-207ENST00000536011 GLRBP48167 497 aa12.51□□□□□ -0.41
RTN3-207ENST00000536011 CLCN7P51798 805 aa12.51□□□□□ -0.41
RTN3-207ENST00000536011 ARF3P61204 181 aaPredicted RBP12.51□□□□□ -0.41
RTN3-207ENST00000536011 CCZ1BP86790 482 aa12.51□□□□□ -0.41
RTN3-207ENST00000536011 CCZ1P86791 482 aaPredicted RBP12.51□□□□□ -0.41
RTN3-207ENST00000536011 PRDX1Q06830 199 aaKnown RBP12.51□□□□□ -0.41
RTN3-207ENST00000536011 KLC1Q07866 573 aa12.51□□□□□ -0.41
RTN3-207ENST00000536011 FASTKQ14296 549 aaKnown RBP12.51□□□□□ -0.41
RTN3-207ENST00000536011 EIF2S3LQ2VIR3 472 aaKnown RBP12.51□□□□□ -0.41
RTN3-207ENST00000536011 THEMIS2Q5TEJ8 643 aa12.51□□□□□ -0.41
RTN3-207ENST00000536011 ANKRD22Q5VYY1 191 aa12.51□□□□□ -0.41
RTN3-207ENST00000536011 CCDC137Q6PK04 289 aaKnown RBP12.51□□□□□ -0.41
RTN3-207ENST00000536011 SUSD1Q6UWL2 747 aa12.51□□□□□ -0.41
RTN3-207ENST00000536011 IGFL2Q6UWQ7 119 aa12.51□□□□□ -0.41
RTN3-207ENST00000536011 ISLR2Q6UXK2 745 aa12.51□□□□□ -0.41
RTN3-207ENST00000536011 ADCK2Q7Z695 626 aa12.51□□□□□ -0.41
RTN3-207ENST00000536011 PAQR7Q86WK9 346 aa12.51□□□□□ -0.41
RTN3-207ENST00000536011 REXO1L1PQ8IX06 675 aa12.51□□□□□ -0.41
RTN3-207ENST00000536011 KBTBD2Q8IY47 623 aa12.51□□□□□ -0.41
RTN3-207ENST00000536011 OR4N4Q8N0Y3 316 aa12.51□□□□□ -0.41
RTN3-207ENST00000536011 RASGEF1CQ8N431 466 aa12.51□□□□□ -0.41
RTN3-207ENST00000536011 INPP5DQ92835 1189 aa12.51□□□□□ -0.41
RTN3-207ENST00000536011 C19orf60Q96EN9 201 aa12.51□□□□□ -0.41
RTN3-207ENST00000536011 THOC3Q96J01 351 aaKnown RBP12.51□□□□□ -0.41
RTN3-207ENST00000536011 C10orf90Q96M02 699 aa12.51□□□□□ -0.41
RTN3-207ENST00000536011 PKP4Q99569 1192 aa12.51□□□□□ -0.41
RTN3-207ENST00000536011 FAM167BQ9BTA0 163 aa12.51□□□□□ -0.41
RTN3-207ENST00000536011 C20orf96Q9NUD7 363 aaPredicted RBP12.51□□□□□ -0.41
RTN3-207ENST00000536011 TAC3Q9UHF0 121 aa12.51□□□□□ -0.41
RTN3-207ENST00000536011 DOPEY1Q5JWR5 2465 aa12.5□□□□□ -0.41
RTN3-207ENST00000536011 IGLV3-12A0A075B6K2 115 aa12.5□□□□□ -0.41
RTN3-207ENST00000536011 NSG1A0A0A6YYJ2 146 aa12.5□□□□□ -0.41
RTN3-207ENST00000536011 ANKUB1A6NFN9 424 aa12.5□□□□□ -0.41
RTN3-207ENST00000536011 GOLGA8MH3BSY2 632 aa12.5□□□□□ -0.41
RTN3-207ENST00000536011 SEMA7AO75326 666 aa12.5□□□□□ -0.41
RTN3-207ENST00000536011 CBX6O95503 412 aa12.5□□□□□ -0.41
RTN3-207ENST00000536011 UQCRHP07919 91 aa12.5□□□□□ -0.41
RTN3-207ENST00000536011 HRH2P25021 359 aa12.5□□□□□ -0.41
RTN3-207ENST00000536011 COILP38432 576 aaPredicted RBP12.5□□□□□ -0.41
RTN3-207ENST00000536011 SLC1A2P43004 574 aa12.5□□□□□ -0.41
RTN3-207ENST00000536011 TSFMP43897 325 aaKnown RBP12.5□□□□□ -0.41
RTN3-207ENST00000536011 FNTAP49354 379 aa12.5□□□□□ -0.41
RTN3-207ENST00000536011 PTK6Q13882 451 aa12.5□□□□□ -0.41
RTN3-207ENST00000536011 TLR1Q15399 786 aa12.5□□□□□ -0.41
RTN3-207ENST00000536011 CYP1B1Q16678 543 aa12.5□□□□□ -0.41
RTN3-207ENST00000536011 NDUFA9Q16795 377 aa12.5□□□□□ -0.41
RTN3-207ENST00000536011 UGT3A1Q6NUS8 523 aa12.5□□□□□ -0.41
RTN3-207ENST00000536011 TTC27Q6P3X3 843 aa12.5□□□□□ -0.41
RTN3-207ENST00000536011 CUZD1Q86UP6 607 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms