RNA–Protein interactions for RNA: ENST00000535327.5

CCDC7-207, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-207ENST00000535327 PTPMT1Q8WUK0 201 aaPredicted RBP3.9□□□□□ -1.79
CCDC7-207ENST00000535327 LPGAT1Q92604 370 aa3.9□□□□□ -1.79
CCDC7-207ENST00000535327 TOMM40LQ969M1 308 aa3.9□□□□□ -1.79
CCDC7-207ENST00000535327 ZNF622Q969S3 477 aaKnown RBP eCLIP3.9□□□□□ -1.79
CCDC7-207ENST00000535327 FAM218AQ96MZ4 157 aa3.9□□□□□ -1.79
CCDC7-207ENST00000535327 GCNAQ96QF7 691 aa3.9□□□□□ -1.79
CCDC7-207ENST00000535327 CDRT15Q96T59 188 aa3.9□□□□□ -1.79
CCDC7-207ENST00000535327 NKIRAS2Q9NYR9 191 aa3.9□□□□□ -1.79
CCDC7-207ENST00000535327 THAP10Q9P2Z0 257 aaPredicted RBP3.9□□□□□ -1.79
CCDC7-207ENST00000535327 STUB1Q9UNE7 303 aa3.9□□□□□ -1.79
CCDC7-207ENST00000535327 MAGED1Q9Y5V3 778 aaPredicted RBP3.9□□□□□ -1.79
CCDC7-207ENST00000535327 STYXL1Q9Y6J8 313 aa3.9□□□□□ -1.79
CCDC7-207ENST00000535327 hCG_1809904A0A1W2PP81 198 aa3.89□□□□□ -1.79
CCDC7-207ENST00000535327 A0A1W2PPE2 198 aa3.89□□□□□ -1.79
CCDC7-207ENST00000535327 A0A1W2PR64 198 aa3.89□□□□□ -1.79
CCDC7-207ENST00000535327 FEZF1A0PJY2 475 aa3.89□□□□□ -1.79
CCDC7-207ENST00000535327 ADAMDEC1O15204 470 aa3.89□□□□□ -1.79
CCDC7-207ENST00000535327 ERAL1O75616 437 aaKnown RBP3.89□□□□□ -1.79
CCDC7-207ENST00000535327 PGM3O95394 542 aa3.89□□□□□ -1.79
CCDC7-207ENST00000535327 TSFMP43897 325 aaKnown RBP3.89□□□□□ -1.79
CCDC7-207ENST00000535327 ZFP36L2P47974 494 aaKnown RBP3.89□□□□□ -1.79
CCDC7-207ENST00000535327 PSMC6P62333 389 aa3.89□□□□□ -1.79
CCDC7-207ENST00000535327 BECN1Q14457 450 aa3.89□□□□□ -1.79
CCDC7-207ENST00000535327 KCTD2Q14681 263 aa3.89□□□□□ -1.79
CCDC7-207ENST00000535327 EFTUD2Q15029 972 aaKnown RBP eCLIP3.89□□□□□ -1.79
CCDC7-207ENST00000535327 ZNF74Q16587 644 aa3.89□□□□□ -1.79
CCDC7-207ENST00000535327 ELFN2Q5R3F8 820 aa3.89□□□□□ -1.79
CCDC7-207ENST00000535327 LCN1P1Q5VSP4 162 aa3.89□□□□□ -1.79
CCDC7-207ENST00000535327 ZNF841Q6ZN19 808 aa3.89□□□□□ -1.79
CCDC7-207ENST00000535327 FBXO39Q8N4B4 442 aa3.89□□□□□ -1.79
CCDC7-207ENST00000535327 PAPD5Q8NDF8 572 aaKnown RBP3.89□□□□□ -1.79
CCDC7-207ENST00000535327 KLHL30-AS1Q8NEE0 82 aa3.89□□□□□ -1.79
CCDC7-207ENST00000535327 PTERQ96BW5 349 aa3.89□□□□□ -1.79
CCDC7-207ENST00000535327 TMCO6Q96DC7 493 aa3.89□□□□□ -1.79
CCDC7-207ENST00000535327 KLHL4Q9C0H6 718 aa3.89□□□□□ -1.79
CCDC7-207ENST00000535327 HEXA-AS1Q9H8Q6 139 aa3.89□□□□□ -1.79
CCDC7-207ENST00000535327 ANKEF1Q9NU02 776 aa3.89□□□□□ -1.79
CCDC7-207ENST00000535327 GRIP1Q9Y3R0 1128 aa3.89□□□□□ -1.79
CCDC7-207ENST00000535327 LOC102723996A0A087X1L8 192 aa3.88□□□□□ -1.79
CCDC7-207ENST00000535327 FPGTO14772 594 aa3.88□□□□□ -1.79
CCDC7-207ENST00000535327 PHF1O43189 567 aaPredicted RBP3.88□□□□□ -1.79
CCDC7-207ENST00000535327 MED24O75448 989 aa3.88□□□□□ -1.79
CCDC7-207ENST00000535327 BCL10O95999 233 aa3.88□□□□□ -1.79
CCDC7-207ENST00000535327 SMIM18P0DKX4 95 aa3.88□□□□□ -1.79
CCDC7-207ENST00000535327 HLA-FP30511 346 aa3.88□□□□□ -1.79
CCDC7-207ENST00000535327 OXTRP30559 389 aa3.88□□□□□ -1.79
CCDC7-207ENST00000535327 KRT20P35900 424 aa3.88□□□□□ -1.79
CCDC7-207ENST00000535327 MNDAP41218 407 aa3.88□□□□□ -1.79
CCDC7-207ENST00000535327 CAPZA2P47755 286 aa3.88□□□□□ -1.79
CCDC7-207ENST00000535327 DLK1P80370 383 aa3.88□□□□□ -1.79
CCDC7-207ENST00000535327 SNAPC1Q16533 368 aa3.88□□□□□ -1.79
CCDC7-207ENST00000535327 ODF4Q2M2E3 257 aa3.88□□□□□ -1.79
CCDC7-207ENST00000535327 TMEM266Q2M3C6 531 aa3.88□□□□□ -1.79
CCDC7-207ENST00000535327 PDLIM3Q53GG5 364 aaPredicted RBP3.88□□□□□ -1.79
CCDC7-207ENST00000535327 UGT3A1Q6NUS8 523 aa3.88□□□□□ -1.79
CCDC7-207ENST00000535327 KRT74Q7RTS7 529 aa3.88□□□□□ -1.79
CCDC7-207ENST00000535327 TIPARPQ7Z3E1 657 aaKnown RBP3.88□□□□□ -1.79
CCDC7-207ENST00000535327 TTC30BQ8N4P2 665 aa3.88□□□□□ -1.79
CCDC7-207ENST00000535327 POGLUT1Q8NBL1 392 aa3.88□□□□□ -1.79
CCDC7-207ENST00000535327 SNRNP27Q8WVK2 155 aaKnown RBP3.88□□□□□ -1.79
CCDC7-207ENST00000535327 C1orf147Q96MC9 270 aaPredicted RBP3.88□□□□□ -1.79
CCDC7-207ENST00000535327 OLFM1Q99784 485 aa3.88□□□□□ -1.79
CCDC7-207ENST00000535327 CCDC106Q9BWC9 280 aa3.88□□□□□ -1.79
CCDC7-207ENST00000535327 B3GAT2Q9NPZ5 323 aa3.88□□□□□ -1.79
CCDC7-207ENST00000535327 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.88□□□□□ -1.79
CCDC7-207ENST00000535327 DDX25Q9UHL0 483 aaKnown RBP3.88□□□□□ -1.79
CCDC7-207ENST00000535327 FAM169AQ9Y6X4 670 aa3.88□□□□□ -1.79
CCDC7-207ENST00000535327 ADAM20O43506 726 aa3.87□□□□□ -1.79
CCDC7-207ENST00000535327 GPRIN2O60269 458 aa3.87□□□□□ -1.79
CCDC7-207ENST00000535327 PDHA2P29803 388 aa3.87□□□□□ -1.79
CCDC7-207ENST00000535327 EXT1Q16394 746 aa3.87□□□□□ -1.79
CCDC7-207ENST00000535327 TEX38Q6PEX7 206 aa3.87□□□□□ -1.79
CCDC7-207ENST00000535327 C16orf54Q6UWD8 224 aa3.87□□□□□ -1.79
CCDC7-207ENST00000535327 TMEM173Q86WV6 379 aaPredicted RBP3.87□□□□□ -1.79
CCDC7-207ENST00000535327 SUMF1Q8NBK3 374 aa3.87□□□□□ -1.79
CCDC7-207ENST00000535327 EXD1Q8NHP7 514 aa3.87□□□□□ -1.79
CCDC7-207ENST00000535327 MS4A10Q96PG2 267 aa3.87□□□□□ -1.79
CCDC7-207ENST00000535327 SPAG5Q96R06 1193 aa3.87□□□□□ -1.79
CCDC7-207ENST00000535327 ABHD1Q96SE0 405 aa3.87□□□□□ -1.79
CCDC7-207ENST00000535327 NKX3-1Q99801 234 aaPredicted RBP3.87□□□□□ -1.79
CCDC7-207ENST00000535327 Q9N2K0 584 aa3.87□□□□□ -1.79
CCDC7-207ENST00000535327 SPHK1Q9NYA1 384 aa3.87□□□□□ -1.79
CCDC7-207ENST00000535327 CLIP2Q9UDT6 1046 aa3.87□□□□□ -1.79
CCDC7-207ENST00000535327 WBP11Q9Y2W2 641 aaKnown RBP3.87□□□□□ -1.79
CCDC7-207ENST00000535327 LOC105371242A0A075B767 164 aa3.86□□□□□ -1.79
CCDC7-207ENST00000535327 TCRBV21S2A2A0A5A6 115 aa3.86□□□□□ -1.79
CCDC7-207ENST00000535327 ANKUB1A6NFN9 424 aa3.86□□□□□ -1.79
CCDC7-207ENST00000535327 C2orf81A6NN90 581 aa3.86□□□□□ -1.79
CCDC7-207ENST00000535327 SNURFLB1AK76 121 aa3.86□□□□□ -1.79
CCDC7-207ENST00000535327 P4HA2O15460 535 aa3.86□□□□□ -1.79
CCDC7-207ENST00000535327 POP4O95707 220 aaKnown RBP3.86□□□□□ -1.79
CCDC7-207ENST00000535327 CAPGP40121 348 aa3.86□□□□□ -1.79
CCDC7-207ENST00000535327 ZNF75DP51815 510 aa3.86□□□□□ -1.79
CCDC7-207ENST00000535327 C9orf152Q5JTZ5 239 aa3.86□□□□□ -1.79
CCDC7-207ENST00000535327 SLC30A6Q6NXT4 461 aa3.86□□□□□ -1.79
CCDC7-207ENST00000535327 Q6ZVH6 145 aa3.86□□□□□ -1.79
CCDC7-207ENST00000535327 G2E3Q7L622 706 aa3.86□□□□□ -1.79
CCDC7-207ENST00000535327 CEP57Q86XR8 500 aa3.86□□□□□ -1.79
CCDC7-207ENST00000535327 OR8H2Q8N162 312 aa3.86□□□□□ -1.79
CCDC7-207ENST00000535327 CCDC107Q8WV48 283 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms