RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 HIST1H2AGP0C0S8 130 aaPredicted RBP11.91□□□□□ -0.5
SCARB1-204ENST00000535005 ALPPL2P10696 532 aa11.91□□□□□ -0.5
SCARB1-204ENST00000535005 HIST1H2ADP20671 130 aa11.91□□□□□ -0.5
SCARB1-204ENST00000535005 TGM1P22735 817 aa11.91□□□□□ -0.5
SCARB1-204ENST00000535005 MAP4P27816 1152 aaKnown RBP11.91□□□□□ -0.5
SCARB1-204ENST00000535005 FASLGP48023 281 aa11.91□□□□□ -0.5
SCARB1-204ENST00000535005 RPIAP49247 311 aa11.91□□□□□ -0.5
SCARB1-204ENST00000535005 APOFQ13790 326 aa11.91□□□□□ -0.5
SCARB1-204ENST00000535005 GRB7Q14451 532 aa11.91□□□□□ -0.5
SCARB1-204ENST00000535005 DEFB133Q30KQ1 61 aa11.91□□□□□ -0.5
SCARB1-204ENST00000535005 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.91□□□□□ -0.5
SCARB1-204ENST00000535005 RBM44Q6ZP01 1051 aaKnown RBP11.91□□□□□ -0.5
SCARB1-204ENST00000535005 OR2I1PQ8NGU4 316 aa11.91□□□□□ -0.5
SCARB1-204ENST00000535005 OR4C6Q8NH72 309 aa11.91□□□□□ -0.5
SCARB1-204ENST00000535005 CXorf40BQ96DE9 158 aa11.91□□□□□ -0.5
SCARB1-204ENST00000535005 HIST1H2AHQ96KK5 128 aa11.91□□□□□ -0.5
SCARB1-204ENST00000535005 CCDC138Q96M89 665 aa11.91□□□□□ -0.5
SCARB1-204ENST00000535005 CAMK1GQ96NX5 476 aa11.91□□□□□ -0.5
SCARB1-204ENST00000535005 HIST1H2AJQ99878 128 aa11.91□□□□□ -0.5
SCARB1-204ENST00000535005 H2AFJQ9BTM1 129 aa11.91□□□□□ -0.5
SCARB1-204ENST00000535005 KIR3DX1Q9H7L2 352 aa11.91□□□□□ -0.5
SCARB1-204ENST00000535005 NUDT4Q9NZJ9 180 aa11.91□□□□□ -0.5
SCARB1-204ENST00000535005 CPNE7Q9UBL6 633 aa11.91□□□□□ -0.5
SCARB1-204ENST00000535005 CFAP20Q9Y6A4 193 aaKnown RBP11.91□□□□□ -0.5
SCARB1-204ENST00000535005 FRYLO94915 3013 aa11.91□□□□□ -0.5
SCARB1-204ENST00000535005 LAMA1P25391 3075 aa11.91□□□□□ -0.5
SCARB1-204ENST00000535005 B4DGG1 531 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 G3V2L1 256 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 FFAR2O15552 330 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 TFAP2AP05549 437 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 ETS2P15036 469 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 ADSLP30566 484 aaPredicted RBP11.9□□□□□ -0.5
SCARB1-204ENST00000535005 BDKRB1P46663 353 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 SPEM2Q0P670 501 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 SLC14A1Q13336 389 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 UBAP2LQ14157 1087 aaKnown RBP11.9□□□□□ -0.5
SCARB1-204ENST00000535005 SF3A2Q15428 464 aaKnown RBP11.9□□□□□ -0.5
SCARB1-204ENST00000535005 GRAMD1BQ3KR37 738 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 C14orf28Q4W4Y0 310 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.9□□□□□ -0.5
SCARB1-204ENST00000535005 LPCAT4Q643R3 524 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 ZCCHC8Q6NZY4 707 aaKnown RBP11.9□□□□□ -0.5
SCARB1-204ENST00000535005 DUS1LQ6P1R4 473 aaKnown RBP11.9□□□□□ -0.5
SCARB1-204ENST00000535005 C16orf89Q6UX73 402 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 ZYG11AQ6WRX3 759 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 RNF111Q6ZNA4 994 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 FRA10AC1Q70Z53 315 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 SLC9B2Q86UD5 537 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 GATAD2AQ86YP4 633 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 ARL14Q8N4G2 192 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 FAM181AQ8N9Y4 354 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 PDPRQ8NCN5 879 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 OR9A1PQ8NGU1 263 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 MAPK15Q8TD08 544 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 PATE1Q8WXA2 126 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 NMD3Q96D46 503 aaKnown RBP11.9□□□□□ -0.5
SCARB1-204ENST00000535005 UCK1Q9HA47 277 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 ARID1BQ8NFD5 2236 aaPredicted RBP11.9□□□□□ -0.5
SCARB1-204ENST00000535005 TRBV23OR9-2A0A075B6M9 112 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 UBXN8O00124 270 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 TXNDC9O14530 226 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 CDX4O14627 284 aaPredicted RBP11.9□□□□□ -0.5
SCARB1-204ENST00000535005 KDM1AO60341 852 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 H2AFYO75367 372 aaKnown RBP11.9□□□□□ -0.5
SCARB1-204ENST00000535005 VIPP01282 170 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 ANXA5P08758 320 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 ITGAXP20702 1163 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 ATP5F1P24539 256 aaPredicted RBP11.9□□□□□ -0.5
SCARB1-204ENST00000535005 HSD17B2P37059 387 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 ACADVLP49748 655 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 HNMTP50135 292 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 SLC25A3Q00325 362 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 NFKB2Q00653 900 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 KRT33BQ14525 404 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 ARHGAP19Q14CB8 494 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 SUZ12Q15022 739 aaKnown RBP11.9□□□□□ -0.5
SCARB1-204ENST00000535005 CCSMST1Q4G0I0 132 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 SFTPA2Q8IWL1 248 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 TCAIMQ8N3R3 496 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 ARL10Q8N8L6 244 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 ATL1Q8WXF7 558 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 FBXL8Q96CD0 374 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 CCDC126Q96EE4 140 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 PKP4Q99569 1192 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 MENTQ9BUN1 341 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 MECRQ9BV79 373 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 PARD6AQ9NPB6 346 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 ARL15Q9NXU5 204 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 UTP6Q9NYH9 597 aaKnown RBP11.9□□□□□ -0.5
SCARB1-204ENST00000535005 SPATA7Q9P0W8 599 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 COPG2Q9UBF2 871 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 ADAMTS9Q9P2N4 1935 aa11.9□□□□□ -0.5
SCARB1-204ENST00000535005 A0A0J9YVX5 310 aa11.89□□□□□ -0.51
SCARB1-204ENST00000535005 PABPN1LA6NDY0 278 aaKnown RBP11.89□□□□□ -0.51
SCARB1-204ENST00000535005 TRIM38O00635 465 aa11.89□□□□□ -0.51
SCARB1-204ENST00000535005 HNRNPRO43390 633 aaKnown RBP11.89□□□□□ -0.51
SCARB1-204ENST00000535005 DLX3O60479 287 aa11.89□□□□□ -0.51
SCARB1-204ENST00000535005 DNAJA2O60884 412 aa11.89□□□□□ -0.51
SCARB1-204ENST00000535005 FAM58BPP0C7Q3 252 aa11.89□□□□□ -0.51
SCARB1-204ENST00000535005 ERGP11308 486 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms