RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 NEMP2A6NFY4 417 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 UBDO15205 165 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 SSX5O60225 188 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 FAM20BO75063 409 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 POLBP06746 335 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 ALPIP09923 528 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 CRHR1P34998 444 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 SLC15A1P46059 708 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 METAP1P53582 386 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 FBXO48Q5FWF7 155 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 NXNL2Q5VZ03 156 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 TPGS2Q68CL5 300 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 RASSF6Q6ZTQ3 369 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 GALNT5Q7Z7M9 940 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 CLYBLQ8N0X4 340 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 RYBPQ8N488 228 aaPredicted RBP8.8□□□□□ -1
SF3B2-216ENST00000534765 AMER2Q8N7J2 671 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 SIMC1Q8NDZ2 872 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 ANGPTL6Q8NI99 470 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 ZNF641Q96N77 438 aaPredicted RBP8.8□□□□□ -1
SF3B2-216ENST00000534765 SORT1Q99523 831 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 BCL7BQ9BQE9 202 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 TM6SF2Q9BZW4 377 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 BPIFA1Q9NP55 256 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 LTB4R2Q9NPC1 389 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 SCUBE2Q9NQ36 999 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 RASSF1Q9NS23 344 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 DUS2Q9NX74 493 aaKnown RBP8.8□□□□□ -1
SF3B2-216ENST00000534765 DCDC2Q9UHG0 476 aa8.8□□□□□ -1
SF3B2-216ENST00000534765 MAGED1Q9Y5V3 778 aaPredicted RBP8.8□□□□□ -1
SF3B2-216ENST00000534765 LRRK1Q38SD2 2015 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 CELSR3Q9NYQ7 3312 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 FADS2P1A8MWK0 482 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 TLL1O43897 1013 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 PAHP00439 452 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 FTH1P02794 183 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 AGXTP21549 392 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 HLA-FP30511 346 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 CTNNB1P35222 781 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 RPL14P50914 215 aaKnown RBP8.79□□□□□ -1
SF3B2-216ENST00000534765 SIM2Q14190 667 aaPredicted RBP8.79□□□□□ -1
SF3B2-216ENST00000534765 SHHQ15465 462 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 DGKKQ5KSL6 1271 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 NRARPQ7Z6K4 114 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 METTL3Q86U44 580 aaKnown RBP8.79□□□□□ -1
SF3B2-216ENST00000534765 C12orf40Q86WS4 652 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 ZNF540Q8NDQ6 660 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 ZNF707Q96C28 371 aaPredicted RBP8.79□□□□□ -1
SF3B2-216ENST00000534765 MGME1Q9BQP7 344 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 PPIL3Q9H2H8 161 aaKnown RBP8.79□□□□□ -1
SF3B2-216ENST00000534765 IFT22Q9H7X7 185 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 CATSPERZQ9NTU4 200 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 PAK1IP1Q9NWT1 392 aaPredicted RBP8.79□□□□□ -1
SF3B2-216ENST00000534765 FNIP2Q9P278 1114 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 NUP50Q9UKX7 468 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 A0A1B0GTL3 188 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 MYO1GB0I1T2 1018 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 H0YC42 278 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 TSHRP16473 764 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 CD36P16671 472 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 OLR1P78380 273 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 TNK2Q07912 1038 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 IL10RBQ08334 325 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 HIST2H2ACQ16777 129 aaPredicted RBP8.79□□□□□ -1
SF3B2-216ENST00000534765 ZNF284Q2VY69 593 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 PAMR1Q6UXH9 720 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 PIANPQ8IYJ0 282 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 OR6Q1Q8NGQ2 317 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 CLHC1Q8NHS4 586 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 CHCHD6Q9BRQ6 235 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 AMBNQ9NP70 447 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 OLA1Q9NTK5 396 aaKnown RBP8.79□□□□□ -1
SF3B2-216ENST00000534765 CCDC154A6NI56 674 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 LEFTY2O00292 366 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 DFNA5O60443 496 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 M6PRP20645 277 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 ETV1P50549 477 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 RAD51Q06609 339 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 PCDH1Q08174 1060 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 ZNF404Q494X3 552 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 AKIRIN2Q53H80 203 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 ARL13AQ5H913 290 aaPredicted RBP8.79□□□□□ -1
SF3B2-216ENST00000534765 CYS1Q717R9 158 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 SLC22A15Q8IZD6 547 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 EID3Q8N140 333 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 TTLQ8NG68 377 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 CHFRQ96EP1 664 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 CENPNQ96H22 339 aaPredicted RBP8.79□□□□□ -1
SF3B2-216ENST00000534765 NARS2Q96I59 477 aaKnown RBP8.79□□□□□ -1
SF3B2-216ENST00000534765 GATA5Q9BWX5 397 aaPredicted RBP8.79□□□□□ -1
SF3B2-216ENST00000534765 IL22Q9GZX6 179 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 RSPH9Q9H1X1 276 aaPredicted RBP8.79□□□□□ -1
SF3B2-216ENST00000534765 CLEC4MQ9H2X3 399 aaPredicted RBP8.79□□□□□ -1
SF3B2-216ENST00000534765 TSR3Q9UJK0 312 aaKnown RBP8.79□□□□□ -1
SF3B2-216ENST00000534765 ZNF222Q9UK12 451 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 PCDHB3Q9Y5E6 796 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 COPG1Q9Y678 874 aaKnown RBP8.79□□□□□ -1
SF3B2-216ENST00000534765 DOCK8Q8NF50 2099 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 BRWD1Q9NSI6 2320 aa8.79□□□□□ -1
SF3B2-216ENST00000534765 ZNF106Q9H2Y7 1883 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms