RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 C5orf22Q49AR2 442 aa18.78■□□□□ 0.6
CAPN1-226ENST00000533820 HORMAD1Q86X24 394 aa18.78■□□□□ 0.6
CAPN1-226ENST00000533820 IFNL1Q8IU54 200 aa18.78■□□□□ 0.6
CAPN1-226ENST00000533820 GLB1L3Q8NCI6 653 aaPredicted RBP18.78■□□□□ 0.6
CAPN1-226ENST00000533820 B3GNT4Q9C0J1 378 aa18.78■□□□□ 0.6
CAPN1-226ENST00000533820 MIR1-1HGQ9H1L0 117 aa18.78■□□□□ 0.6
CAPN1-226ENST00000533820 GLYATL1P3A0A0U1RQE8 302 aa18.78■□□□□ 0.6
CAPN1-226ENST00000533820 CXCR2P25025 360 aa18.78■□□□□ 0.6
CAPN1-226ENST00000533820 NRIP1P48552 1158 aa18.78■□□□□ 0.6
CAPN1-226ENST00000533820 ZXDCQ2QGD7 858 aaPredicted RBP18.78■□□□□ 0.6
CAPN1-226ENST00000533820 PDE12Q6L8Q7 609 aaKnown RBP18.78■□□□□ 0.6
CAPN1-226ENST00000533820 TTC29Q8NA56 475 aaPredicted RBP18.78■□□□□ 0.6
CAPN1-226ENST00000533820 PSMA8Q8TAA3 256 aa18.78■□□□□ 0.6
CAPN1-226ENST00000533820 HCAR2Q8TDS4 363 aa18.78■□□□□ 0.6
CAPN1-226ENST00000533820 MED30Q96HR3 178 aa18.78■□□□□ 0.6
CAPN1-226ENST00000533820 PANX1Q96RD7 426 aa18.78■□□□□ 0.6
CAPN1-226ENST00000533820 RRAGCQ9HB90 399 aa18.78■□□□□ 0.6
CAPN1-226ENST00000533820 CCDC177Q9NQR7 707 aaPredicted RBP18.78■□□□□ 0.6
CAPN1-226ENST00000533820 TRBV5-3A0A0A0MS03 114 aa18.77■□□□□ 0.6
CAPN1-226ENST00000533820 WDR47O94967 919 aa18.77■□□□□ 0.6
CAPN1-226ENST00000533820 PGLSO95336 258 aa18.77■□□□□ 0.6
CAPN1-226ENST00000533820 IGHA2P01877 340 aa18.77■□□□□ 0.6
CAPN1-226ENST00000533820 SDC1P18827 310 aa18.77■□□□□ 0.6
CAPN1-226ENST00000533820 EPORP19235 508 aa18.77■□□□□ 0.6
CAPN1-226ENST00000533820 SMAD3P84022 425 aaKnown RBP18.77■□□□□ 0.6
CAPN1-226ENST00000533820 TOP3AQ13472 1001 aaPredicted RBP18.77■□□□□ 0.6
CAPN1-226ENST00000533820 BOP1Q14137 746 aaKnown RBP18.77■□□□□ 0.6
CAPN1-226ENST00000533820 CLCA4Q14CN2 919 aa18.77■□□□□ 0.6
CAPN1-226ENST00000533820 OXA1LQ15070 435 aa18.77■□□□□ 0.6
CAPN1-226ENST00000533820 CATSPEREQ5SY80 951 aa18.77■□□□□ 0.6
CAPN1-226ENST00000533820 OR2T5Q6IEZ7 315 aa18.77■□□□□ 0.6
CAPN1-226ENST00000533820 CERS6Q6ZMG9 384 aa18.77■□□□□ 0.6
CAPN1-226ENST00000533820 TRIM46Q7Z4K8 759 aa18.77■□□□□ 0.6
CAPN1-226ENST00000533820 DBF4BQ8NFT6 615 aa18.77■□□□□ 0.6
CAPN1-226ENST00000533820 OR2T29Q8NH02 315 aa18.77■□□□□ 0.6
CAPN1-226ENST00000533820 TRIT1Q9H3H1 467 aaKnown RBP18.77■□□□□ 0.6
CAPN1-226ENST00000533820 TET1Q8NFU7 2136 aa18.77■□□□□ 0.6
CAPN1-226ENST00000533820 GOLGA4Q13439 2230 aaKnown RBP18.77■□□□□ 0.6
CAPN1-226ENST00000533820 NTRK1P04629 796 aa18.77■□□□□ 0.6
CAPN1-226ENST00000533820 EBLN1P0CF75 366 aa18.77■□□□□ 0.6
CAPN1-226ENST00000533820 GPRC6AQ5T6X5 926 aa18.77■□□□□ 0.6
CAPN1-226ENST00000533820 ATG9BQ674R7 924 aa18.77■□□□□ 0.6
CAPN1-226ENST00000533820 SNX20Q7Z614 316 aa18.77■□□□□ 0.6
CAPN1-226ENST00000533820 CLECL1Q8IZS7 167 aa18.77■□□□□ 0.6
CAPN1-226ENST00000533820 ZIC5Q96T25 663 aa18.77■□□□□ 0.6
CAPN1-226ENST00000533820 TTPALQ9BTX7 342 aa18.77■□□□□ 0.6
CAPN1-226ENST00000533820 PCDHB7Q9Y5E2 793 aa18.77■□□□□ 0.6
CAPN1-226ENST00000533820 PLXNA4Q9HCM2 1894 aa18.77■□□□□ 0.6
CAPN1-226ENST00000533820 ERN1O75460 977 aaKnown RBP18.77■□□□□ 0.59
CAPN1-226ENST00000533820 SEC24AO95486 1093 aa18.77■□□□□ 0.59
CAPN1-226ENST00000533820 ENGP17813 658 aa18.77■□□□□ 0.59
CAPN1-226ENST00000533820 CD9P21926 228 aa18.77■□□□□ 0.59
CAPN1-226ENST00000533820 BMPR1AP36894 532 aa18.77■□□□□ 0.59
CAPN1-226ENST00000533820 ARHGDIAP52565 204 aa18.77■□□□□ 0.59
CAPN1-226ENST00000533820 SLC13A2Q13183 592 aa18.77■□□□□ 0.59
CAPN1-226ENST00000533820 C2orf49Q9BVC5 232 aaPredicted RBP18.77■□□□□ 0.59
CAPN1-226ENST00000533820 KCNH6Q9H252 994 aa18.77■□□□□ 0.59
CAPN1-226ENST00000533820 AKIP1Q9NQ31 210 aa18.77■□□□□ 0.59
CAPN1-226ENST00000533820 SCN3BQ9NY72 215 aa18.77■□□□□ 0.59
CAPN1-226ENST00000533820 CD84Q9UIB8 345 aa18.77■□□□□ 0.59
CAPN1-226ENST00000533820 SLC22A14Q9Y267 594 aa18.77■□□□□ 0.59
CAPN1-226ENST00000533820 FAM220BPB1ANY3 271 aa18.76■□□□□ 0.59
CAPN1-226ENST00000533820 JRKO75564 520 aa18.76■□□□□ 0.59
CAPN1-226ENST00000533820 EIF2S1P05198 315 aaKnown RBP18.76■□□□□ 0.59
CAPN1-226ENST00000533820 ANXA5P08758 320 aa18.76■□□□□ 0.59
CAPN1-226ENST00000533820 ACRV1P26436 265 aa18.76■□□□□ 0.59
CAPN1-226ENST00000533820 GZMMP51124 257 aa18.76■□□□□ 0.59
CAPN1-226ENST00000533820 HNRNPFP52597 415 aaKnown RBP18.76■□□□□ 0.59
CAPN1-226ENST00000533820 GPR153Q6NV75 609 aa18.76■□□□□ 0.59
CAPN1-226ENST00000533820 HEATR4Q86WZ0 1026 aa18.76■□□□□ 0.59
CAPN1-226ENST00000533820 ZNF641Q96N77 438 aaPredicted RBP18.76■□□□□ 0.59
CAPN1-226ENST00000533820 REXO4Q9GZR2 422 aaKnown RBP18.76■□□□□ 0.59
CAPN1-226ENST00000533820 MAGEE1Q9HCI5 957 aa18.76■□□□□ 0.59
CAPN1-226ENST00000533820 ABCB10Q9NRK6 738 aa18.76■□□□□ 0.59
CAPN1-226ENST00000533820 WDR70Q9NW82 654 aa18.76■□□□□ 0.59
CAPN1-226ENST00000533820 TMEM45AQ9NWC5 275 aa18.76■□□□□ 0.59
CAPN1-226ENST00000533820 SIRT5Q9NXA8 310 aa18.76■□□□□ 0.59
CAPN1-226ENST00000533820 TRPM5Q9NZQ8 1165 aa18.76■□□□□ 0.59
CAPN1-226ENST00000533820 ZNF229Q9UJW7 825 aa18.76■□□□□ 0.59
CAPN1-226ENST00000533820 EVPLLA8MZ36 301 aa18.76■□□□□ 0.59
CAPN1-226ENST00000533820 ARHGAP33O14559 1287 aa18.76■□□□□ 0.59
CAPN1-226ENST00000533820 SLC16A6O15403 523 aa18.76■□□□□ 0.59
CAPN1-226ENST00000533820 FZD6O60353 706 aa18.76■□□□□ 0.59
CAPN1-226ENST00000533820 CCDC159P0C7I6 412 aa18.76■□□□□ 0.59
CAPN1-226ENST00000533820 SEPHS1P49903 392 aa18.76■□□□□ 0.59
CAPN1-226ENST00000533820 BCL2L1Q07817 233 aa18.76■□□□□ 0.59
CAPN1-226ENST00000533820 REXO5Q96IC2 774 aaKnown RBP18.76■□□□□ 0.59
CAPN1-226ENST00000533820 MTERF1Q99551 399 aaKnown RBP18.76■□□□□ 0.59
CAPN1-226ENST00000533820 RMND5AQ9H871 391 aa18.76■□□□□ 0.59
CAPN1-226ENST00000533820 KRT84Q9NSB2 600 aa18.76■□□□□ 0.59
CAPN1-226ENST00000533820 TPRKBQ9Y3C4 175 aa18.76■□□□□ 0.59
CAPN1-226ENST00000533820 A0A096LPI6 279 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 TBKBP1A7MCY6 615 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 GABARAPO95166 117 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 VIPP01282 170 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 NUDT7P0C024 238 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 SLC35A2P78381 396 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 PTCHD3Q3KNS1 767 aa18.75■□□□□ 0.59
CAPN1-226ENST00000533820 SHQ1Q6PI26 577 aaKnown RBP18.75■□□□□ 0.59
CAPN1-226ENST00000533820 UBE2R2Q712K3 238 aaPredicted RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms