RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 HERVK_113P63132 956 aa10.98□□□□□ -0.65
AMBRA1-211ENST00000533727 NCEH1Q6PIU2 408 aa10.98□□□□□ -0.65
AMBRA1-211ENST00000533727 SPESP1Q6UW49 350 aa10.98□□□□□ -0.65
AMBRA1-211ENST00000533727 ZNF598Q86UK7 904 aaKnown RBP10.98□□□□□ -0.65
AMBRA1-211ENST00000533727 TMEM156Q8N614 296 aa10.98□□□□□ -0.65
AMBRA1-211ENST00000533727 TMIEQ8NEW7 156 aa10.98□□□□□ -0.65
AMBRA1-211ENST00000533727 DNAJB14Q8TBM8 379 aa10.98□□□□□ -0.65
AMBRA1-211ENST00000533727 ERVK-6Q9BXR3 956 aa10.98□□□□□ -0.65
AMBRA1-211ENST00000533727 R3HDMLQ9H3Y0 253 aa10.98□□□□□ -0.65
AMBRA1-211ENST00000533727 VPS29Q9UBQ0 182 aa10.98□□□□□ -0.65
AMBRA1-211ENST00000533727 EPHA6Q9UF33 1036 aa10.98□□□□□ -0.65
AMBRA1-211ENST00000533727 PPIEQ9UNP9 301 aaKnown RBP10.98□□□□□ -0.65
AMBRA1-211ENST00000533727 FAM86C2PA6NEL3 165 aa10.98□□□□□ -0.65
AMBRA1-211ENST00000533727 MID1O15344 667 aa10.98□□□□□ -0.65
AMBRA1-211ENST00000533727 TMEM63AO94886 807 aa10.98□□□□□ -0.65
AMBRA1-211ENST00000533727 CXCL10P02778 98 aa10.98□□□□□ -0.65
AMBRA1-211ENST00000533727 IMPDH1P20839 514 aa10.98□□□□□ -0.65
AMBRA1-211ENST00000533727 PRPS1L1P21108 318 aa10.98□□□□□ -0.65
AMBRA1-211ENST00000533727 ENDOUP21128 410 aaKnown RBP10.98□□□□□ -0.65
AMBRA1-211ENST00000533727 ARHGAP8P85298 464 aa10.98□□□□□ -0.65
AMBRA1-211ENST00000533727 RPA4Q13156 261 aa10.98□□□□□ -0.65
AMBRA1-211ENST00000533727 LRP8Q14114 963 aa10.98□□□□□ -0.65
AMBRA1-211ENST00000533727 AGTRAPQ6RW13 159 aa10.98□□□□□ -0.65
AMBRA1-211ENST00000533727 THOC6Q86W42 341 aaKnown RBP10.98□□□□□ -0.65
AMBRA1-211ENST00000533727 PRSS58Q8IYP2 241 aa10.98□□□□□ -0.65
AMBRA1-211ENST00000533727 IL22RA1Q8N6P7 574 aa10.98□□□□□ -0.65
AMBRA1-211ENST00000533727 PDPRQ8NCN5 879 aa10.98□□□□□ -0.65
AMBRA1-211ENST00000533727 RCN3Q96D15 328 aa10.98□□□□□ -0.65
AMBRA1-211ENST00000533727 MOV10Q9HCE1 1003 aaKnown RBP10.98□□□□□ -0.65
AMBRA1-211ENST00000533727 SALL4Q9UJQ4 1053 aa10.98□□□□□ -0.65
AMBRA1-211ENST00000533727 SPIN1Q9Y657 262 aaPredicted RBP10.98□□□□□ -0.65
AMBRA1-211ENST00000533727 GRXCR1A8MXD5 290 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 ERI3O43414 337 aaKnown RBP10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 TOP3BO95985 862 aaKnown RBP10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 PLGLB1Q02325 96 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 CSTF1Q05048 431 aaKnown RBP10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 MLF2Q15773 248 aaPredicted RBP10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 SLC14A2Q15849 920 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 ARHGAP36Q6ZRI8 547 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 OFCC1Q8IZS5 231 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 C8orf4Q9NR00 106 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 ZBTB42B2RXF5 422 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 TFECO14948 347 aaPredicted RBP10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 MTX2O75431 263 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 MPSTP25325 297 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 RPS15P62841 145 aaKnown RBP10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 CSNK2BP67870 215 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 SIM2Q14190 667 aaPredicted RBP10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 FRG2Q64ET8 278 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 MR1Q95460 341 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 PPP1R14AQ96A00 147 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 FRG2BQ96QU4 278 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 TPSD1Q9BZJ3 242 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 SLCO3A1Q9UIG8 710 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 ZNF222Q9UK12 451 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 RARRES3Q9UL19 164 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 PRELID1Q9Y255 219 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 DNMT3AQ9Y6K1 912 aaPredicted RBP10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 XKRYO14609 159 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 NDUFS4O43181 175 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 SSNA1O43805 119 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 SRCP12931 536 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 GSTM5P46439 218 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 CASP6P55212 293 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 ELOAQ14241 798 aaKnown RBP10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 PTGES3Q15185 160 aaKnown RBP10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 ARL13AQ5H913 290 aaPredicted RBP10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 C1orf220Q5T0J3 134 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 PLET1Q6UQ28 207 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 C12orf40Q86WS4 652 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 IZUMO1Q8IYV9 350 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 UBE2ZQ9H832 354 aaPredicted RBP10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 MOCS1Q9NZB8 636 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 SIT1Q9Y3P8 196 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 FADS3Q9Y5Q0 445 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 IGLON5A6NGN9 336 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 SAGE2PA6NJ88 616 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 SLC22A2O15244 555 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 EDN1P05305 212 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 CD70P32970 193 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 CSNK1DP48730 415 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 ACY1Q03154 408 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 PYDC2Q56P42 97 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 TOR1AIP1Q5JTV8 583 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 TMIGD1Q6UXZ0 262 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 UNC5DQ6UXZ4 953 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 ZNF572Q7Z3I7 529 aaPredicted RBP10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 UBALD2Q8IYN6 164 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 CNTD1Q8N815 330 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 ANKRD49Q8WVL7 239 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 SLC13A3Q8WWT9 602 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 PEBP4Q96S96 227 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 RTKNQ9BST9 563 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 SLC46A2Q9BY10 475 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 TBL1XR1Q9BZK7 514 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 HAPLN2Q9GZV7 340 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 HSD3B7Q9H2F3 369 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 CLN6Q9NWW5 311 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 CMTM6Q9NX76 183 aa10.97□□□□□ -0.65
AMBRA1-211ENST00000533727 RIMKLBQ9ULI2 386 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms