RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 DCAF10Q5QP82 559 aa10.91□□□□□ -0.66
TRAPPC4-213ENST00000533149 TMTC4Q5T4D3 741 aa10.91□□□□□ -0.66
TRAPPC4-213ENST00000533149 FAM69BQ5VUD6 431 aa10.91□□□□□ -0.66
TRAPPC4-213ENST00000533149 LCN10Q6JVE6 187 aa10.91□□□□□ -0.66
TRAPPC4-213ENST00000533149 MTFR2Q6P444 385 aa10.91□□□□□ -0.66
TRAPPC4-213ENST00000533149 ABRAXAS1Q6UWZ7 409 aa10.91□□□□□ -0.66
TRAPPC4-213ENST00000533149 SNX20Q7Z614 316 aa10.91□□□□□ -0.66
TRAPPC4-213ENST00000533149 GALNT7Q86SF2 657 aa10.91□□□□□ -0.66
TRAPPC4-213ENST00000533149 MRGPRGQ86SM5 289 aa10.91□□□□□ -0.66
TRAPPC4-213ENST00000533149 ACVR1CQ8NER5 493 aa10.91□□□□□ -0.66
TRAPPC4-213ENST00000533149 PPP4R1Q8TF05 950 aa10.91□□□□□ -0.66
TRAPPC4-213ENST00000533149 ZNF501Q96CX3 271 aaPredicted RBP10.91□□□□□ -0.66
TRAPPC4-213ENST00000533149 CXorf40BQ96DE9 158 aa10.91□□□□□ -0.66
TRAPPC4-213ENST00000533149 CLIP3Q96DZ5 547 aa10.91□□□□□ -0.66
TRAPPC4-213ENST00000533149 VPS39Q96JC1 886 aa10.91□□□□□ -0.66
TRAPPC4-213ENST00000533149 ASB8Q9H765 288 aa10.91□□□□□ -0.66
TRAPPC4-213ENST00000533149 CNOT6Q9ULM6 557 aaKnown RBP10.91□□□□□ -0.66
TRAPPC4-213ENST00000533149 ACTL7BQ9Y614 415 aa10.91□□□□□ -0.66
TRAPPC4-213ENST00000533149 NAV3Q8IVL0 2385 aa10.91□□□□□ -0.66
TRAPPC4-213ENST00000533149 UBA6A0AVT1 1052 aaPredicted RBP10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 TLCD2A6NGC4 264 aa10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 C9J4A7 227 aa10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 GOLGA8RI6L899 631 aa10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 PFDN6O15212 129 aa10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 PRAMEF1O95521 474 aa10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 CAPN1P07384 714 aa10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 PYGBP11216 843 aa10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 BRAFP15056 766 aa10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 KRT4P19013 534 aa10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 OTX2P32243 289 aa10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 HPDP32754 393 aaPredicted RBP10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 RORAP35398 523 aa10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 SOX8P57073 446 aa10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 SLC18A2Q05940 514 aa10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 CDC16Q13042 620 aa10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 SSPNQ14714 243 aa10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 NCF4Q15080 339 aa10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 SEPT7Q16181 437 aaKnown RBP10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 INSCQ1MX18 579 aa10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 GPR33Q49SQ1 333 aa10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 AARS2Q5JTZ9 985 aaKnown RBP10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 B3GNTL1Q67FW5 361 aaPredicted RBP10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 FAM180AQ6UWF9 173 aa10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 RPTNQ6XPR3 784 aa10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 CERS6Q6ZMG9 384 aa10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 SH2D5Q6ZV89 423 aa10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 MRGPREQ86SM8 312 aa10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 SERPINA9Q86WD7 417 aa10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 CNPY4Q8N129 248 aa10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 C4orf33Q8N1A6 199 aa10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 C14orf79Q96F83 325 aa10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 SMC6Q96SB8 1091 aa10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 GPR22Q99680 433 aa10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 MAP3K3Q99759 626 aa10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 SLX1AQ9BQ83 275 aa10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 DPH2Q9BQC3 489 aaPredicted RBP10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 FANCEQ9HB96 536 aa10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 KCNK9Q9NPC2 374 aa10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 INTS10Q9NVR2 710 aaKnown RBP10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 SENP1Q9P0U3 644 aa10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 ATXN10Q9UBB4 475 aa10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 SLC39A10Q9ULF5 831 aa10.9□□□□□ -0.66
TRAPPC4-213ENST00000533149 TRBV5-4A0A0C4DH59 114 aa10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 FAM95CA0A1B0GW59 222 aa10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 GPR39O43194 453 aa10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 SPAG7O75391 227 aa10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 JRKO75564 520 aa10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 ZBTB11O95625 1053 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 ALDOAP04075 364 aaKnown RBP10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 ZNF8P17098 575 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 SAT1P21673 171 aa10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 TYK2P29597 1187 aa10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 FMO4P31512 558 aa10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 PPARGP37231 505 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 TTPAP49638 278 aa10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 DCDC1P59894 354 aa10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 PPP1CAP62136 330 aa10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 PPP2R2AP63151 447 aa10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 ILF2Q12905 390 aaKnown RBP10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 USP10Q14694 798 aaKnown RBP10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 ZNF169Q14929 603 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 PLCL1Q15111 1095 aa10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 GPR19Q15760 415 aa10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 DBN1Q16643 649 aa10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 ATP13A5Q4VNC0 1218 aa10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 RBM20Q5T481 1227 aaKnown RBP10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 HECTD2Q5U5R9 776 aa10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 AGAP9Q5VTM2 703 aa10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 ZNF549Q6P9A3 640 aa10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 FAM198BQ6UWH4 519 aa10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 WASH2PQ6VEQ5 465 aa10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 SYTL1Q8IYJ3 562 aa10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 CARFQ8N187 725 aa10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 GPATCH11Q8N954 259 aa10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 FAM76AQ8TAV0 307 aa10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 DNAJB14Q8TBM8 379 aa10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 DTX3LQ8TDB6 740 aa10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 LPGAT1Q92604 370 aa10.89□□□□□ -0.67
TRAPPC4-213ENST00000533149 TTC1Q99614 292 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms