RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 IGKV1-8A0A0C4DH67 115 aa16.04■□□□□ 0.16
CPSF1-207ENST00000531727 SDR42E2A6NKP2 422 aa16.04■□□□□ 0.16
CPSF1-207ENST00000531727 ZNF839A8K0R7 811 aa16.04■□□□□ 0.16
CPSF1-207ENST00000531727 VPS26AO75436 327 aa16.04■□□□□ 0.16
CPSF1-207ENST00000531727 ZGLP1P0C6A0 271 aa16.04■□□□□ 0.16
CPSF1-207ENST00000531727 FBLP22087 321 aaKnown RBP16.04■□□□□ 0.16
CPSF1-207ENST00000531727 HSD17B2P37059 387 aa16.04■□□□□ 0.16
CPSF1-207ENST00000531727 PNLIPRP1P54315 467 aa16.04■□□□□ 0.16
CPSF1-207ENST00000531727 HIST2H2BCQ6DN03 193 aa16.04■□□□□ 0.16
CPSF1-207ENST00000531727 REXO1L1PQ8IX06 675 aa16.04■□□□□ 0.16
CPSF1-207ENST00000531727 RASGEF1CQ8N431 466 aa16.04■□□□□ 0.16
CPSF1-207ENST00000531727 COG1Q8WTW3 980 aa16.04■□□□□ 0.16
CPSF1-207ENST00000531727 MVB12AQ96EY5 273 aa16.04■□□□□ 0.16
CPSF1-207ENST00000531727 CABS1Q96KC9 395 aa16.04■□□□□ 0.16
CPSF1-207ENST00000531727 SLC30A3Q99726 388 aa16.04■□□□□ 0.16
CPSF1-207ENST00000531727 XAB2Q9HCS7 855 aaKnown RBP16.04■□□□□ 0.16
CPSF1-207ENST00000531727 KLHL42Q9P2K6 505 aa16.04■□□□□ 0.16
CPSF1-207ENST00000531727 NTNG1Q9Y2I2 539 aa16.04■□□□□ 0.16
CPSF1-207ENST00000531727 PPP2R2CQ9Y2T4 447 aa16.04■□□□□ 0.16
CPSF1-207ENST00000531727 ESPL1Q14674 2120 aa16.04■□□□□ 0.16
CPSF1-207ENST00000531727 IGLV3-12A0A075B6K2 115 aa16.03■□□□□ 0.16
CPSF1-207ENST00000531727 ZCWPW2A0A1B0GU75 182 aa16.03■□□□□ 0.16
CPSF1-207ENST00000531727 CTAGE9A4FU28 777 aa16.03■□□□□ 0.16
CPSF1-207ENST00000531727 ANKUB1A6NFN9 424 aa16.03■□□□□ 0.16
CPSF1-207ENST00000531727 PRPF4O43172 522 aaKnown RBP eCLIP16.03■□□□□ 0.16
CPSF1-207ENST00000531727 CCNDBP1O95273 360 aa16.03■□□□□ 0.16
CPSF1-207ENST00000531727 HPP00738 406 aa16.03■□□□□ 0.16
CPSF1-207ENST00000531727 ACPPP15309 386 aa16.03■□□□□ 0.16
CPSF1-207ENST00000531727 PRDX1Q06830 199 aaKnown RBP16.03■□□□□ 0.16
CPSF1-207ENST00000531727 Q0VFX4 171 aa16.03■□□□□ 0.16
CPSF1-207ENST00000531727 TSTA3Q13630 321 aaPredicted RBP16.03■□□□□ 0.16
CPSF1-207ENST00000531727 THOC5Q13769 683 aaKnown RBP16.03■□□□□ 0.16
CPSF1-207ENST00000531727 ICE2Q659A1 982 aa16.03■□□□□ 0.16
CPSF1-207ENST00000531727 ZNF425Q6IV72 752 aa16.03■□□□□ 0.16
CPSF1-207ENST00000531727 DENND6AQ8IWF6 608 aa16.03■□□□□ 0.16
CPSF1-207ENST00000531727 PRSS58Q8IYP2 241 aa16.03■□□□□ 0.16
CPSF1-207ENST00000531727 CSNK1A1LQ8N752 337 aa16.03■□□□□ 0.16
CPSF1-207ENST00000531727 FBXO15Q8NCQ5 510 aaPredicted RBP16.03■□□□□ 0.16
CPSF1-207ENST00000531727 MCUQ8NE86 351 aa16.03■□□□□ 0.16
CPSF1-207ENST00000531727 GIMAP7Q8NHV1 300 aa16.03■□□□□ 0.16
CPSF1-207ENST00000531727 ZNF480Q8WV37 535 aa16.03■□□□□ 0.16
CPSF1-207ENST00000531727 KCNJ9Q92806 393 aa16.03■□□□□ 0.16
CPSF1-207ENST00000531727 MAGOHBQ96A72 148 aaKnown RBP16.03■□□□□ 0.16
CPSF1-207ENST00000531727 THOC3Q96J01 351 aaKnown RBP16.03■□□□□ 0.16
CPSF1-207ENST00000531727 SERPINB12Q96P63 405 aa16.03■□□□□ 0.16
CPSF1-207ENST00000531727 MESP1Q9BRJ9 268 aa16.03■□□□□ 0.16
CPSF1-207ENST00000531727 EPS8L2Q9H6S3 715 aa16.03■□□□□ 0.16
CPSF1-207ENST00000531727 SYNPO2LQ9H987 977 aa16.03■□□□□ 0.16
CPSF1-207ENST00000531727 FBXO6Q9NRD1 293 aaPredicted RBP16.03■□□□□ 0.16
CPSF1-207ENST00000531727 UTP6Q9NYH9 597 aaKnown RBP16.03■□□□□ 0.16
CPSF1-207ENST00000531727 TAC3Q9UHF0 121 aa16.03■□□□□ 0.16
CPSF1-207ENST00000531727 C3orf18Q9UK00 162 aa16.03■□□□□ 0.16
CPSF1-207ENST00000531727 CDC14AQ9UNH5 594 aa16.03■□□□□ 0.16
CPSF1-207ENST00000531727 NOVA2Q9UNW9 492 aaKnown RBP16.03■□□□□ 0.16
CPSF1-207ENST00000531727 RUVBL1Q9Y265 456 aaKnown RBP16.03■□□□□ 0.16
CPSF1-207ENST00000531727 MED16Q9Y2X0 877 aa16.03■□□□□ 0.16
CPSF1-207ENST00000531727 DOCK10Q96BY6 2186 aa16.03■□□□□ 0.16
CPSF1-207ENST00000531727 E7ENX8 843 aa16.02■□□□□ 0.16
CPSF1-207ENST00000531727 GOLGA8MH3BSY2 632 aa16.02■□□□□ 0.16
CPSF1-207ENST00000531727 MAP2K7O14733 419 aa16.02■□□□□ 0.16
CPSF1-207ENST00000531727 SLC16A8O95907 504 aa16.02■□□□□ 0.16
CPSF1-207ENST00000531727 F7P08709 466 aaPredicted RBP16.02■□□□□ 0.16
CPSF1-207ENST00000531727 MPC1LP0DKB6 136 aa16.02■□□□□ 0.16
CPSF1-207ENST00000531727 EZRP15311 586 aaKnown RBP16.02■□□□□ 0.16
CPSF1-207ENST00000531727 SLC1A2P43004 574 aa16.02■□□□□ 0.16
CPSF1-207ENST00000531727 TAP2Q03519 686 aa16.02■□□□□ 0.16
CPSF1-207ENST00000531727 CTBP1Q13363 440 aa16.02■□□□□ 0.16
CPSF1-207ENST00000531727 CUL1Q13616 776 aa16.02■□□□□ 0.16
CPSF1-207ENST00000531727 DSG2Q14126 1118 aa16.02■□□□□ 0.16
CPSF1-207ENST00000531727 ELOAQ14241 798 aaKnown RBP16.02■□□□□ 0.16
CPSF1-207ENST00000531727 VWA2Q5GFL6 755 aa16.02■□□□□ 0.16
CPSF1-207ENST00000531727 ATG9BQ674R7 924 aa16.02■□□□□ 0.16
CPSF1-207ENST00000531727 ZNF549Q6P9A3 640 aa16.02■□□□□ 0.16
CPSF1-207ENST00000531727 LMNTD2Q8IXW0 634 aa16.02■□□□□ 0.16
CPSF1-207ENST00000531727 PPFIBP2Q8ND30 876 aa16.02■□□□□ 0.16
CPSF1-207ENST00000531727 DNAJB14Q8TBM8 379 aa16.02■□□□□ 0.16
CPSF1-207ENST00000531727 ASB11Q8WXH4 323 aa16.02■□□□□ 0.16
CPSF1-207ENST00000531727 MS4A14Q96JA4 679 aa16.02■□□□□ 0.16
CPSF1-207ENST00000531727 PBKQ96KB5 322 aa16.02■□□□□ 0.16
CPSF1-207ENST00000531727 CCDC68Q9H2F9 335 aa16.02■□□□□ 0.16
CPSF1-207ENST00000531727 ZNF160Q9HCG1 818 aa16.02■□□□□ 0.16
CPSF1-207ENST00000531727 AGPAT4Q9NRZ5 378 aa16.02■□□□□ 0.16
CPSF1-207ENST00000531727 ERRFI1Q9UJM3 462 aaPredicted RBP16.02■□□□□ 0.16
CPSF1-207ENST00000531727 NEU2Q9Y3R4 380 aa16.02■□□□□ 0.16
CPSF1-207ENST00000531727 WIPF3A6NGB9 483 aa16.01■□□□□ 0.15
CPSF1-207ENST00000531727 GFYI3L273 518 aa16.01■□□□□ 0.15
CPSF1-207ENST00000531727 NRDCO43847 1150 aa16.01■□□□□ 0.15
CPSF1-207ENST00000531727 KIF5CO60282 957 aa16.01■□□□□ 0.15
CPSF1-207ENST00000531727 ENO3P13929 434 aaPredicted RBP16.01■□□□□ 0.15
CPSF1-207ENST00000531727 COILP38432 576 aaPredicted RBP16.01■□□□□ 0.15
CPSF1-207ENST00000531727 MAGEA3P43357 314 aa16.01■□□□□ 0.15
CPSF1-207ENST00000531727 TSFMP43897 325 aaKnown RBP16.01■□□□□ 0.15
CPSF1-207ENST00000531727 ABATP80404 500 aa16.01■□□□□ 0.15
CPSF1-207ENST00000531727 RELAQ04206 551 aa16.01■□□□□ 0.15
CPSF1-207ENST00000531727 ZNF169Q14929 603 aaPredicted RBP16.01■□□□□ 0.15
CPSF1-207ENST00000531727 CYP1B1Q16678 543 aa16.01■□□□□ 0.15
CPSF1-207ENST00000531727 HKDC1Q2TB90 917 aa16.01■□□□□ 0.15
CPSF1-207ENST00000531727 GARNL3Q5VVW2 1013 aa16.01■□□□□ 0.15
CPSF1-207ENST00000531727 B3GNTL1Q67FW5 361 aaPredicted RBP16.01■□□□□ 0.15
CPSF1-207ENST00000531727 CCDC137Q6PK04 289 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms