RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 SEC22BO75396 215 aa11.23□□□□□ -0.61
USP35-207ENST00000530546 EEDO75530 441 aaKnown RBP11.23□□□□□ -0.61
USP35-207ENST00000530546 KRT6AP02538 564 aa11.23□□□□□ -0.61
USP35-207ENST00000530546 KRT6BP04259 564 aa11.23□□□□□ -0.61
USP35-207ENST00000530546 GPIP06744 558 aa11.23□□□□□ -0.61
USP35-207ENST00000530546 CTSLP07711 333 aa11.23□□□□□ -0.61
USP35-207ENST00000530546 ATP1B2P14415 290 aaPredicted RBP11.23□□□□□ -0.61
USP35-207ENST00000530546 PFKLP17858 780 aa11.23□□□□□ -0.61
USP35-207ENST00000530546 DDX6P26196 483 aaKnown RBP eCLIP11.23□□□□□ -0.61
USP35-207ENST00000530546 EPHA5P54756 1037 aa11.23□□□□□ -0.61
USP35-207ENST00000530546 PHC1P78364 1004 aa11.23□□□□□ -0.61
USP35-207ENST00000530546 EMX2Q04743 252 aa11.23□□□□□ -0.61
USP35-207ENST00000530546 LCN8Q6JVE9 175 aa11.23□□□□□ -0.61
USP35-207ENST00000530546 SPERTQ8NA61 448 aa11.23□□□□□ -0.61
USP35-207ENST00000530546 SUN5Q8TC36 379 aa11.23□□□□□ -0.61
USP35-207ENST00000530546 ELMO1Q92556 727 aa11.23□□□□□ -0.61
USP35-207ENST00000530546 ARMC5Q96C12 935 aa11.23□□□□□ -0.61
USP35-207ENST00000530546 ZFYVE19Q96K21 471 aa11.23□□□□□ -0.61
USP35-207ENST00000530546 ALG2Q9H553 416 aa11.23□□□□□ -0.61
USP35-207ENST00000530546 ACTL8Q9H568 366 aa11.23□□□□□ -0.61
USP35-207ENST00000530546 WARS2Q9UGM6 360 aaKnown RBP11.23□□□□□ -0.61
USP35-207ENST00000530546 ITM2BQ9Y287 266 aa11.23□□□□□ -0.61
USP35-207ENST00000530546 PCDHGA3Q9Y5H0 932 aa11.23□□□□□ -0.61
USP35-207ENST00000530546 PCDHA9Q9Y5H5 950 aa11.23□□□□□ -0.61
USP35-207ENST00000530546 DGKBQ9Y6T7 804 aa11.23□□□□□ -0.61
USP35-207ENST00000530546 SNPHO15079 494 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 ARPC2O15144 300 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 RGS14O43566 566 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 ALX3O95076 343 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 GSNP06396 782 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 HIST1H2AGP0C0S8 130 aaPredicted RBP11.22□□□□□ -0.61
USP35-207ENST00000530546 HIST1H2ADP20671 130 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 ITPKAP23677 461 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 VIPR1P32241 457 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 VIPR2P41587 438 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 NR4A2P43354 598 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 MTPNP58546 118 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 DGUOKQ16854 277 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 WDR45BQ5MNZ6 344 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 ZFAND4Q86XD8 727 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 CLIP4Q8N3C7 705 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 HIST1H2AHQ96KK5 128 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 MRGPRX3Q96LB0 322 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 HIST1H2AJQ99878 128 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 H2AFJQ9BTM1 129 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 TMEM106CQ9BVX2 250 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 ATG10Q9H0Y0 220 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 WDR47O94967 919 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 MT-ND1P03886 318 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 CYP2A6P11509 494 aaPredicted RBP11.22□□□□□ -0.61
USP35-207ENST00000530546 TIMP2P16035 220 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 AOAHP28039 575 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 PTPN5P54829 565 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 GABARAPL2P60520 117 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 CAMK1Q14012 370 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 SPATS1Q496A3 300 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 RGL4Q8IZJ4 473 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 Q8N9G6 341 aaPredicted RBP11.22□□□□□ -0.61
USP35-207ENST00000530546 TRPV3Q8NET8 790 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 ANGPTL6Q8NI99 470 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 FRS2Q8WU20 508 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 FOXJ1Q92949 421 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 TP53INP1Q96A56 240 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 NACC2Q96BF6 587 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 PPP3R2Q96LZ3 170 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 WRAP53Q9BUR4 548 aaKnown RBP11.22□□□□□ -0.61
USP35-207ENST00000530546 TRIM54Q9BYV2 358 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 TRIT1Q9H3H1 467 aaKnown RBP11.22□□□□□ -0.61
USP35-207ENST00000530546 HEBP1Q9NRV9 189 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 ZNF639Q9UID6 485 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 LINC01553A4QN01 128 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 MANBAO00462 879 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 KPNA3O00505 521 aaPredicted RBP11.22□□□□□ -0.61
USP35-207ENST00000530546 IDH3BO43837 385 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 FGF19O95750 216 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 ALBP02768 609 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 BMP4P12644 408 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 HSD17B1P14061 328 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 MSH3P20585 1137 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 OXTRP30559 389 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 GRK3P35626 688 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 MESP2Q0VG99 397 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 ABRQ12979 859 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 GRIK2Q13002 908 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 DHCR24Q15392 516 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 CTF1Q16619 201 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 ZXDCQ2QGD7 858 aaPredicted RBP11.22□□□□□ -0.61
USP35-207ENST00000530546 BRAT1Q6PJG6 821 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 PIWIL3Q7Z3Z3 882 aaKnown RBP11.22□□□□□ -0.61
USP35-207ENST00000530546 C12orf40Q86WS4 652 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 SPARTQ8N0X7 666 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 LIX1Q8N485 282 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 OR6Q1Q8NGQ2 317 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 MUL1Q969V5 352 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 ACTR3BQ9P1U1 418 aa11.22□□□□□ -0.61
USP35-207ENST00000530546 EIF3LQ9Y262 564 aaKnown RBP11.22□□□□□ -0.61
USP35-207ENST00000530546 LOC105371267A0A1B0GV96 52 aa11.21□□□□□ -0.61
USP35-207ENST00000530546 TMEM202A6NGA9 273 aa11.21□□□□□ -0.61
USP35-207ENST00000530546 GRXCR1A8MXD5 290 aa11.21□□□□□ -0.61
USP35-207ENST00000530546 UPK3BL1B0FP48 263 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms