RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 ZFYVE21Q9BQ24 234 aa12.83□□□□□ -0.36
CAPN1-215ENST00000528396 RHOXF2Q9BQY4 288 aa12.83□□□□□ -0.36
CAPN1-215ENST00000528396 PLCD4Q9BRC7 762 aa12.83□□□□□ -0.36
CAPN1-215ENST00000528396 HAUS8Q9BT25 410 aa12.83□□□□□ -0.36
CAPN1-215ENST00000528396 FAM117AQ9C073 453 aa12.83□□□□□ -0.36
CAPN1-215ENST00000528396 SLC6A20Q9NP91 592 aa12.83□□□□□ -0.36
CAPN1-215ENST00000528396 STARD5Q9NSY2 213 aa12.83□□□□□ -0.36
CAPN1-215ENST00000528396 IFT80Q9P2H3 777 aaPredicted RBP12.83□□□□□ -0.36
CAPN1-215ENST00000528396 DHCR7Q9UBM7 475 aaKnown RBP12.83□□□□□ -0.36
CAPN1-215ENST00000528396 FARSAQ9Y285 508 aaKnown RBP12.83□□□□□ -0.36
CAPN1-215ENST00000528396 PCDHGA6Q9Y5G7 932 aa12.83□□□□□ -0.36
CAPN1-215ENST00000528396 KLK4Q9Y5K2 254 aa12.83□□□□□ -0.36
CAPN1-215ENST00000528396 IKBKGQ9Y6K9 419 aa12.83□□□□□ -0.36
CAPN1-215ENST00000528396 SPTA1P02549 2419 aa12.83□□□□□ -0.36
CAPN1-215ENST00000528396 OR2A25A4D2G3 310 aa12.82□□□□□ -0.36
CAPN1-215ENST00000528396 CDC7O00311 574 aa12.82□□□□□ -0.36
CAPN1-215ENST00000528396 ATXN7O15265 892 aaPredicted RBP12.82□□□□□ -0.36
CAPN1-215ENST00000528396 PHGDHO43175 533 aaKnown RBP12.82□□□□□ -0.36
CAPN1-215ENST00000528396 CTSVO60911 334 aa12.82□□□□□ -0.36
CAPN1-215ENST00000528396 CREG1O75629 220 aa12.82□□□□□ -0.36
CAPN1-215ENST00000528396 ACSL3O95573 720 aa12.82□□□□□ -0.36
CAPN1-215ENST00000528396 CD63P08962 238 aa12.82□□□□□ -0.36
CAPN1-215ENST00000528396 CCDC166P0CW27 439 aa12.82□□□□□ -0.36
CAPN1-215ENST00000528396 PIM1P11309 404 aaPredicted RBP12.82□□□□□ -0.36
CAPN1-215ENST00000528396 EZRP15311 586 aaKnown RBP12.82□□□□□ -0.36
CAPN1-215ENST00000528396 F8A1P23610 371 aa12.82□□□□□ -0.36
CAPN1-215ENST00000528396 RORAP35398 523 aa12.82□□□□□ -0.36
CAPN1-215ENST00000528396 GRK3P35626 688 aa12.82□□□□□ -0.36
CAPN1-215ENST00000528396 CCR10P46092 362 aa12.82□□□□□ -0.36
CAPN1-215ENST00000528396 RAB10P61026 200 aa12.82□□□□□ -0.36
CAPN1-215ENST00000528396 TBR1Q16650 682 aa12.82□□□□□ -0.36
CAPN1-215ENST00000528396 DEFB109BQ30KR1 87 aa12.82□□□□□ -0.36
CAPN1-215ENST00000528396 WASHC2DQ5SRD0 308 aa12.82□□□□□ -0.36
CAPN1-215ENST00000528396 MLIPQ5VWP3 458 aa12.82□□□□□ -0.36
CAPN1-215ENST00000528396 RNF44Q7L0R7 432 aa12.82□□□□□ -0.36
CAPN1-215ENST00000528396 TAOK1Q7L7X3 1001 aa12.82□□□□□ -0.36
CAPN1-215ENST00000528396 TBC1D1Q86TI0 1168 aaPredicted RBP12.82□□□□□ -0.36
CAPN1-215ENST00000528396 SYVN1Q86TM6 617 aa12.82□□□□□ -0.36
CAPN1-215ENST00000528396 ENDOVQ8N8Q3 282 aaKnown RBP12.82□□□□□ -0.36
CAPN1-215ENST00000528396 LSM14AQ8ND56 463 aaKnown RBP12.82□□□□□ -0.36
CAPN1-215ENST00000528396 ANKRD7Q92527 254 aa12.82□□□□□ -0.36
CAPN1-215ENST00000528396 CABS1Q96KC9 395 aa12.82□□□□□ -0.36
CAPN1-215ENST00000528396 GPR22Q99680 433 aa12.82□□□□□ -0.36
CAPN1-215ENST00000528396 NLNQ9BYT8 704 aa12.82□□□□□ -0.36
CAPN1-215ENST00000528396 AKIRIN1Q9H9L7 192 aaPredicted RBP12.82□□□□□ -0.36
CAPN1-215ENST00000528396 CUTCQ9NTM9 273 aa12.82□□□□□ -0.36
CAPN1-215ENST00000528396 NINJ2Q9NZG7 142 aa12.82□□□□□ -0.36
CAPN1-215ENST00000528396 NOVA2Q9UNW9 492 aaKnown RBP12.82□□□□□ -0.36
CAPN1-215ENST00000528396 A0A1B0GX78 115 aa12.81□□□□□ -0.36
CAPN1-215ENST00000528396 HYKKA2RU49 373 aa12.81□□□□□ -0.36
CAPN1-215ENST00000528396 H7BY64 318 aa12.81□□□□□ -0.36
CAPN1-215ENST00000528396 FAM155BO75949 473 aa12.81□□□□□ -0.36
CAPN1-215ENST00000528396 S100BP04271 92 aaPredicted RBP12.81□□□□□ -0.36
CAPN1-215ENST00000528396 CTSBP07858 339 aa12.81□□□□□ -0.36
CAPN1-215ENST00000528396 ANXA5P08758 320 aa12.81□□□□□ -0.36
CAPN1-215ENST00000528396 RAB40ALP0C0E4 278 aa12.81□□□□□ -0.36
CAPN1-215ENST00000528396 CRABP2P29373 138 aa12.81□□□□□ -0.36
CAPN1-215ENST00000528396 ATP6V0D1P61421 351 aa12.81□□□□□ -0.36
CAPN1-215ENST00000528396 RPS18P62269 152 aaKnown RBP12.81□□□□□ -0.36
CAPN1-215ENST00000528396 YBX1P67809 324 aaKnown RBP12.81□□□□□ -0.36
CAPN1-215ENST00000528396 COL9A2Q14055 689 aaPredicted RBP12.81□□□□□ -0.36
CAPN1-215ENST00000528396 SLC9A5Q14940 896 aa12.81□□□□□ -0.36
CAPN1-215ENST00000528396 EFTUD2Q15029 972 aaKnown RBP eCLIP12.81□□□□□ -0.362e-6■■■□□ 18.5
CAPN1-215ENST00000528396 NCF4Q15080 339 aa12.81□□□□□ -0.36
CAPN1-215ENST00000528396 TSNQ15631 228 aaKnown RBP12.81□□□□□ -0.36
CAPN1-215ENST00000528396 NKAIN1Q4KMZ8 207 aa12.81□□□□□ -0.36
CAPN1-215ENST00000528396 CRTC2Q53ET0 693 aaPredicted RBP12.81□□□□□ -0.36
CAPN1-215ENST00000528396 FRMPD2BQ6IN97 320 aa12.81□□□□□ -0.36
CAPN1-215ENST00000528396 TMEM207Q6UWW9 146 aa12.81□□□□□ -0.36
CAPN1-215ENST00000528396 PAQR7Q86WK9 346 aa12.81□□□□□ -0.36
CAPN1-215ENST00000528396 TBC1D19Q8N5T2 526 aa12.81□□□□□ -0.36
CAPN1-215ENST00000528396 CSNK1A1LQ8N752 337 aa12.81□□□□□ -0.36
CAPN1-215ENST00000528396 SLC39A7Q92504 469 aa12.81□□□□□ -0.36
CAPN1-215ENST00000528396 FBXL8Q96CD0 374 aa12.81□□□□□ -0.36
CAPN1-215ENST00000528396 WBP1Q96G27 269 aa12.81□□□□□ -0.36
CAPN1-215ENST00000528396 PRAP1Q96NZ9 151 aa12.81□□□□□ -0.36
CAPN1-215ENST00000528396 DHRS4Q9BTZ2 278 aa12.81□□□□□ -0.36
CAPN1-215ENST00000528396 DERL2Q9GZP9 239 aa12.81□□□□□ -0.36
CAPN1-215ENST00000528396 CDC42EP4Q9H3Q1 356 aaKnown RBP12.81□□□□□ -0.36
CAPN1-215ENST00000528396 TMEM184CQ9NVA4 438 aa12.81□□□□□ -0.36
CAPN1-215ENST00000528396 CUEDC1Q9NWM3 386 aaPredicted RBP12.81□□□□□ -0.36
CAPN1-215ENST00000528396 NFU1Q9UMS0 254 aa12.81□□□□□ -0.36
CAPN1-215ENST00000528396 POLHQ9Y253 713 aa12.81□□□□□ -0.36
CAPN1-215ENST00000528396 DYRK1BQ9Y463 629 aa12.81□□□□□ -0.36
CAPN1-215ENST00000528396 SEC16AO15027 2179 aa12.81□□□□□ -0.36
CAPN1-215ENST00000528396 PCM1Q15154 2024 aa12.8□□□□□ -0.36
CAPN1-215ENST00000528396 LOC105369274A0A096LPK9 316 aa12.8□□□□□ -0.36
CAPN1-215ENST00000528396 LOC102723532A0A0G2JNH3 316 aa12.8□□□□□ -0.36
CAPN1-215ENST00000528396 H0YGG7 62 aa12.8□□□□□ -0.36
CAPN1-215ENST00000528396 TK2O00142 265 aa12.8□□□□□ -0.36
CAPN1-215ENST00000528396 TXNDC9O14530 226 aa12.8□□□□□ -0.36
CAPN1-215ENST00000528396 TERTO14746 1132 aaKnown RBP12.8□□□□□ -0.36
CAPN1-215ENST00000528396 DSCR3O14972 297 aa12.8□□□□□ -0.36
CAPN1-215ENST00000528396 NRP2O60462 931 aa12.8□□□□□ -0.36
CAPN1-215ENST00000528396 INHBAP08476 426 aa12.8□□□□□ -0.36
CAPN1-215ENST00000528396 FOLR3P41439 243 aa12.8□□□□□ -0.36
CAPN1-215ENST00000528396 HNMTP50135 292 aa12.8□□□□□ -0.36
CAPN1-215ENST00000528396 CCR8P51685 355 aa12.8□□□□□ -0.36
CAPN1-215ENST00000528396 ARF3P61204 181 aaPredicted RBP12.8□□□□□ -0.36
CAPN1-215ENST00000528396 RPS15AP62244 130 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms