RNA–Protein interactions for RNA: ENST00000528086.5

CD44-227, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-227ENST00000528086 DPH2Q9BQC3 489 aaPredicted RBP10.18□□□□□ -0.78
CD44-227ENST00000528086 SELENOSQ9BQE4 189 aa10.18□□□□□ -0.78
CD44-227ENST00000528086 SGPP1Q9BX95 441 aa10.18□□□□□ -0.78
CD44-227ENST00000528086 FAM117AQ9C073 453 aa10.18□□□□□ -0.78
CD44-227ENST00000528086 EPN3Q9H201 632 aa10.18□□□□□ -0.78
CD44-227ENST00000528086 CUTCQ9NTM9 273 aa10.18□□□□□ -0.78
CD44-227ENST00000528086 CTSFQ9UBX1 484 aa10.18□□□□□ -0.78
CD44-227ENST00000528086 SNX7Q9UNH6 387 aa10.18□□□□□ -0.78
CD44-227ENST00000528086 VWA7Q9Y334 891 aa10.18□□□□□ -0.78
CD44-227ENST00000528086 FAM187AA6NFU0 413 aa10.17□□□□□ -0.78
CD44-227ENST00000528086 J3QKU1 62 aa10.17□□□□□ -0.78
CD44-227ENST00000528086 SMAPO00193 183 aa10.17□□□□□ -0.78
CD44-227ENST00000528086 DSCR3O14972 297 aa10.17□□□□□ -0.78
CD44-227ENST00000528086 PFDN6O15212 129 aa10.17□□□□□ -0.78
CD44-227ENST00000528086 LCMT2O60294 686 aaKnown RBP10.17□□□□□ -0.78
CD44-227ENST00000528086 KDM1AO60341 852 aa10.17□□□□□ -0.78
CD44-227ENST00000528086 SRPX2O60687 465 aaPredicted RBP10.17□□□□□ -0.78
CD44-227ENST00000528086 VPS26AO75436 327 aa10.17□□□□□ -0.78
CD44-227ENST00000528086 RFPL1O75677 317 aa10.17□□□□□ -0.78
CD44-227ENST00000528086 HBQ1P09105 142 aa10.17□□□□□ -0.78
CD44-227ENST00000528086 SFTPCP11686 197 aa10.17□□□□□ -0.78
CD44-227ENST00000528086 PAFAH1B1P43034 410 aa10.17□□□□□ -0.78
CD44-227ENST00000528086 ARL4CP56559 192 aa10.17□□□□□ -0.78
CD44-227ENST00000528086 GUCY2DQ02846 1103 aa10.17□□□□□ -0.78
CD44-227ENST00000528086 MGAT5Q09328 741 aa10.17□□□□□ -0.78
CD44-227ENST00000528086 NKG7Q16617 165 aa10.17□□□□□ -0.78
CD44-227ENST00000528086 PPP1R3AQ16821 1122 aa10.17□□□□□ -0.78
CD44-227ENST00000528086 TTLL9Q3SXZ7 439 aa10.17□□□□□ -0.78
CD44-227ENST00000528086 TCTN3Q6NUS6 607 aa10.17□□□□□ -0.78
CD44-227ENST00000528086 TTC23LQ6PF05 361 aa10.17□□□□□ -0.78
CD44-227ENST00000528086 OVCH1Q7RTY7 1134 aa10.17□□□□□ -0.78
CD44-227ENST00000528086 MRGPREQ86SM8 312 aa10.17□□□□□ -0.78
CD44-227ENST00000528086 LAPTM4BQ86VI4 370 aa10.17□□□□□ -0.78
CD44-227ENST00000528086 AMER3Q8N944 861 aa10.17□□□□□ -0.78
CD44-227ENST00000528086 FDCSPQ8NFU4 85 aa10.17□□□□□ -0.78
CD44-227ENST00000528086 OR2Y1Q8NGV0 311 aa10.17□□□□□ -0.78
CD44-227ENST00000528086 MAGEC3Q8TD91 643 aa10.17□□□□□ -0.78
CD44-227ENST00000528086 THAP4Q8WY91 577 aa10.17□□□□□ -0.78
CD44-227ENST00000528086 CCDC138Q96M89 665 aa10.17□□□□□ -0.78
CD44-227ENST00000528086 ZFYVE21Q9BQ24 234 aa10.17□□□□□ -0.78
CD44-227ENST00000528086 MACROD1Q9BQ69 325 aa10.17□□□□□ -0.78
CD44-227ENST00000528086 NUDT9Q9BW91 350 aa10.17□□□□□ -0.78
CD44-227ENST00000528086 ATG10Q9H0Y0 220 aa10.17□□□□□ -0.78
CD44-227ENST00000528086 ING2Q9H160 280 aa10.17□□□□□ -0.78
CD44-227ENST00000528086 CCDC68Q9H2F9 335 aa10.17□□□□□ -0.78
CD44-227ENST00000528086 SPNS1Q9H2V7 528 aa10.17□□□□□ -0.78
CD44-227ENST00000528086 MRPS30Q9NP92 439 aaKnown RBP10.17□□□□□ -0.78
CD44-227ENST00000528086 ASH1LQ9NR48 2969 aaKnown RBP10.17□□□□□ -0.78
CD44-227ENST00000528086 FAM114A2Q9NRY5 505 aa10.17□□□□□ -0.78
CD44-227ENST00000528086 INTS7Q9NVH2 962 aaKnown RBP10.17□□□□□ -0.78
CD44-227ENST00000528086 TAS2R13Q9NYV9 303 aa10.17□□□□□ -0.78
CD44-227ENST00000528086 WHRNQ9P202 907 aa10.17□□□□□ -0.78
CD44-227ENST00000528086 TRMT6Q9UJA5 497 aaKnown RBP10.17□□□□□ -0.78
CD44-227ENST00000528086 SRPK3Q9UPE1 567 aa10.17□□□□□ -0.78
CD44-227ENST00000528086 RUVBL1Q9Y265 456 aaKnown RBP10.17□□□□□ -0.78
CD44-227ENST00000528086 PTRH2Q9Y3E5 179 aaKnown RBP10.17□□□□□ -0.78
CD44-227ENST00000528086 MAU2Q9Y6X3 613 aa10.17□□□□□ -0.78
CD44-227ENST00000528086 A0A1B0GX78 115 aa10.16□□□□□ -0.78
CD44-227ENST00000528086 HYKKA2RU49 373 aa10.16□□□□□ -0.78
CD44-227ENST00000528086 H7BY64 318 aa10.16□□□□□ -0.78
CD44-227ENST00000528086 CDC7O00311 574 aa10.16□□□□□ -0.78
CD44-227ENST00000528086 SOCS6O14544 535 aa10.16□□□□□ -0.78
CD44-227ENST00000528086 FFAR3O14843 346 aa10.16□□□□□ -0.78
CD44-227ENST00000528086 GPR42O15529 346 aa10.16□□□□□ -0.78
CD44-227ENST00000528086 ALOX12BO75342 701 aa10.16□□□□□ -0.78
CD44-227ENST00000528086 SYF2O95926 243 aaKnown RBP10.16□□□□□ -0.78
CD44-227ENST00000528086 NPPBP16860 134 aa10.16□□□□□ -0.78
CD44-227ENST00000528086 ZNF37AP17032 561 aaPredicted RBP10.16□□□□□ -0.78
CD44-227ENST00000528086 ALAS2P22557 587 aa10.16□□□□□ -0.78
CD44-227ENST00000528086 CMPK1P30085 196 aa10.16□□□□□ -0.78
CD44-227ENST00000528086 CASQ1P31415 396 aa10.16□□□□□ -0.78
CD44-227ENST00000528086 OTX2P32243 289 aa10.16□□□□□ -0.78
CD44-227ENST00000528086 RPA3P35244 121 aaPredicted RBP10.16□□□□□ -0.78
CD44-227ENST00000528086 CD97P48960 835 aa10.16□□□□□ -0.78
CD44-227ENST00000528086 CCL11P51671 97 aa10.16□□□□□ -0.78
CD44-227ENST00000528086 TBPL1P62380 186 aa10.16□□□□□ -0.78
CD44-227ENST00000528086 CSNK1G2P78368 415 aa10.16□□□□□ -0.78
CD44-227ENST00000528086 SSPNQ14714 243 aa10.16□□□□□ -0.78
CD44-227ENST00000528086 GRM7Q14831 915 aa10.16□□□□□ -0.78
CD44-227ENST00000528086 LACTB2Q53H82 288 aaPredicted RBP10.16□□□□□ -0.78
CD44-227ENST00000528086 ZC3H12BQ5HYM0 836 aaKnown RBP10.16□□□□□ -0.78
CD44-227ENST00000528086 UGT3A1Q6NUS8 523 aa10.16□□□□□ -0.78
CD44-227ENST00000528086 AGTRAPQ6RW13 159 aa10.16□□□□□ -0.78
CD44-227ENST00000528086 CAPN12Q6ZSI9 719 aa10.16□□□□□ -0.78
CD44-227ENST00000528086 SHISA6Q6ZSJ9 500 aa10.16□□□□□ -0.78
CD44-227ENST00000528086 PRSS41Q7RTY9 318 aa10.16□□□□□ -0.78
CD44-227ENST00000528086 PRICKLE2Q7Z3G6 844 aa10.16□□□□□ -0.78
CD44-227ENST00000528086 ZBED8Q8IZ13 594 aa10.16□□□□□ -0.78
CD44-227ENST00000528086 GPATCH11Q8N954 259 aa10.16□□□□□ -0.78
CD44-227ENST00000528086 FBXO25Q8TCJ0 367 aa10.16□□□□□ -0.78
CD44-227ENST00000528086 ANP32BQ92688 251 aaKnown RBP10.16□□□□□ -0.78
CD44-227ENST00000528086 PDLIM5Q96HC4 596 aaKnown RBP10.16□□□□□ -0.78
CD44-227ENST00000528086 PRAP1Q96NZ9 151 aa10.16□□□□□ -0.78
CD44-227ENST00000528086 NDC1Q9BTX1 674 aa10.16□□□□□ -0.78
CD44-227ENST00000528086 DHRS4Q9BTZ2 278 aa10.16□□□□□ -0.78
CD44-227ENST00000528086 AICDAQ9GZX7 198 aa10.16□□□□□ -0.78
CD44-227ENST00000528086 SLC26A1Q9H2B4 701 aa10.16□□□□□ -0.78
CD44-227ENST00000528086 PARVBQ9HBI1 364 aa10.16□□□□□ -0.78
CD44-227ENST00000528086 ZBTB20Q9HC78 741 aaPredicted RBP10.16□□□□□ -0.78
CD44-227ENST00000528086 ZDHHC18Q9NUE0 388 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms