RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 SCRG1O75711 98 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 STK16O75716 305 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 STK17BO94768 372 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 UQCRHP07919 91 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 ENO2P09104 434 aaPredicted RBP4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 NUDT17P0C025 328 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 ANKRD34CP0C6C1 535 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 EPORP19235 508 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 WT1P19544 449 aaPredicted RBP4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 CD22P20273 847 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 ALAS2P22557 587 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 CNTFP26441 200 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 ARL1P40616 181 aaPredicted RBP4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 BCL6P41182 706 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 CDH13P55290 713 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 AP1S2P56377 157 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 ARF3P61204 181 aaPredicted RBP4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 RPS18P62269 152 aaKnown RBP4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 CSNK1G2P78368 415 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 SHC2P98077 582 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 NFKB2Q00653 900 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 PRDX1Q06830 199 aaKnown RBP4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 TRA2AQ13595 282 aaKnown RBP eCLIP4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 SLBPQ14493 270 aaKnown RBP eCLIP4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 CASP8Q14790 479 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 ARHGAP19Q14CB8 494 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 RTP5Q14D33 572 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 ACAP2Q15057 778 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 RBBP5Q15291 538 aaKnown RBP4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 HKDC1Q2TB90 917 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 WASHC2DQ5SRD0 308 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 TMTC4Q5T4D3 741 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 DCAF12Q5T6F0 453 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 CAPN13Q6MZZ7 669 aaPredicted RBP4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 C19orf48Q6RUI8 117 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 LCTLQ6UWM7 567 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 TIFABQ6ZNK6 161 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 SHISA6Q6ZSJ9 500 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 SH2D5Q6ZV89 423 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 PRSS41Q7RTY9 318 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 TRABD2AQ86V40 505 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 PAQR7Q86WK9 346 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 C17orf64Q86WR6 236 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 PPP1R3BQ86XI6 285 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 TDRPQ86YL5 185 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 IQCKQ8N0W5 287 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 D2HGDHQ8N465 521 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 TMEM151AQ8N4L1 468 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 MREGQ8N565 214 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 AMER2Q8N7J2 671 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 CCNYL1Q8N7R7 359 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 ANKRD42Q8N9B4 389 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 CCDC63Q8NA47 563 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 GALNT6Q8NCL4 622 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 ARMC2Q8NEN0 867 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 OR56A3Q8NH54 315 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 HMGCLL1Q8TB92 370 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 ZCCHC10Q8TBK6 192 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 ZCCHC14Q8WYQ9 949 aaKnown RBP4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 CCT6BQ92526 530 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 ISL2Q96A47 359 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 SLC22A18Q96BI1 424 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 NXPE2Q96DL1 559 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 MTFMTQ96DP5 389 aaKnown RBP4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 MTBPQ96DY7 904 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 CLIP3Q96DZ5 547 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 TCTN2Q96GX1 697 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 CDK15Q96Q40 435 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 TAAR9Q96RI9 348 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 CD180Q99467 661 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 DPYSL5Q9BPU6 564 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 SELENOSQ9BQE4 189 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 PLCD4Q9BRC7 762 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 MECRQ9BV79 373 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 SGPP1Q9BX95 441 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 CD244Q9BZW8 370 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 SLC7A5P2Q9GIP4 190 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 NRSN2Q9GZP1 204 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 TWSG1Q9GZX9 223 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 CCDC86Q9H6F5 360 aaKnown RBP4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 MLXIPLQ9NP71 852 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 SEMA4BQ9NPR2 832 aaPredicted RBP4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 DNAJC11Q9NVH1 559 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 NUDT4Q9NZJ9 180 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 NDOR1Q9UHB4 597 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 PTBP2Q9UKA9 531 aaKnown RBP4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 RARRES3Q9UL19 164 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 NOVA2Q9UNW9 492 aaKnown RBP4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 DYRK1BQ9Y463 629 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 ANGPTL3Q9Y5C1 460 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 MRPS18BQ9Y676 258 aaKnown RBP4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 MAU2Q9Y6X3 613 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 PTPRZ1P23471 2315 aaPredicted RBP4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 KNL1Q8NG31 2342 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 FAM186AA6NE01 2351 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 RIF1Q5UIP0 2472 aaKnown RBP4.4□□□□□ -1.7
CHMP4A-202ENST00000524955 LOC101059948A0A1B0GTJ6 334 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 OR2A25A4D2G3 310 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 ZNF860A6NHJ4 632 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 ZNF839A8K0R7 811 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms