RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 PAQR7Q86WK9 346 aa17.9■□□□□ 0.46
PTP4A3-206ENST00000524028 GIMAP7Q8NHV1 300 aa17.9■□□□□ 0.46
PTP4A3-206ENST00000524028 SMPDL3AQ92484 453 aa17.9■□□□□ 0.46
PTP4A3-206ENST00000524028 MRPS30Q9NP92 439 aaKnown RBP17.9■□□□□ 0.46
PTP4A3-206ENST00000524028 C3orf18Q9UK00 162 aa17.9■□□□□ 0.46
PTP4A3-206ENST00000524028 MED16Q9Y2X0 877 aa17.9■□□□□ 0.46
PTP4A3-206ENST00000524028 NUP210LQ5VU65 1888 aa17.89■□□□□ 0.45
PTP4A3-206ENST00000524028 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.89■□□□□ 0.45
PTP4A3-206ENST00000524028 GOLGA6L6A8MZA4 724 aa17.89■□□□□ 0.45
PTP4A3-206ENST00000524028 PFDN6O15212 129 aa17.89■□□□□ 0.45
PTP4A3-206ENST00000524028 HPP00738 406 aa17.89■□□□□ 0.45
PTP4A3-206ENST00000524028 CCDC175P0C221 793 aa17.89■□□□□ 0.45
PTP4A3-206ENST00000524028 ACPPP15309 386 aa17.89■□□□□ 0.45
PTP4A3-206ENST00000524028 FBLP22087 321 aaKnown RBP17.89■□□□□ 0.45
PTP4A3-206ENST00000524028 RPA3P35244 121 aaPredicted RBP17.89■□□□□ 0.45
PTP4A3-206ENST00000524028 TSFMP43897 325 aaKnown RBP17.89■□□□□ 0.45
PTP4A3-206ENST00000524028 GPS1Q13098 491 aa17.89■□□□□ 0.45
PTP4A3-206ENST00000524028 MUM1Q2TAK8 710 aa17.89■□□□□ 0.45
PTP4A3-206ENST00000524028 HKDC1Q2TB90 917 aa17.89■□□□□ 0.45
PTP4A3-206ENST00000524028 IRAK1BP1Q5VVH5 260 aa17.89■□□□□ 0.45
PTP4A3-206ENST00000524028 LINC00696Q6ZRV3 163 aa17.89■□□□□ 0.45
PTP4A3-206ENST00000524028 MAMDC2Q7Z304 686 aaPredicted RBP17.89■□□□□ 0.45
PTP4A3-206ENST00000524028 REXO1L1PQ8IX06 675 aa17.89■□□□□ 0.45
PTP4A3-206ENST00000524028 ARHGEF39Q8N4T4 335 aa17.89■□□□□ 0.45
PTP4A3-206ENST00000524028 PPFIBP2Q8ND30 876 aa17.89■□□□□ 0.45
PTP4A3-206ENST00000524028 CATSPER1Q8NEC5 780 aa17.89■□□□□ 0.45
PTP4A3-206ENST00000524028 CABS1Q96KC9 395 aa17.89■□□□□ 0.45
PTP4A3-206ENST00000524028 CNDP1Q96KN2 507 aa17.89■□□□□ 0.45
PTP4A3-206ENST00000524028 OR2A5Q96R48 311 aa17.89■□□□□ 0.45
PTP4A3-206ENST00000524028 HOMER3Q9NSC5 361 aa17.89■□□□□ 0.45
PTP4A3-206ENST00000524028 TAC3Q9UHF0 121 aa17.89■□□□□ 0.45
PTP4A3-206ENST00000524028 RUVBL1Q9Y265 456 aaKnown RBP17.89■□□□□ 0.45
PTP4A3-206ENST00000524028 E5RI56 91 aa17.88■□□□□ 0.45
PTP4A3-206ENST00000524028 E2F3O00716 465 aa17.88■□□□□ 0.45
PTP4A3-206ENST00000524028 USP1O94782 785 aa17.88■□□□□ 0.45
PTP4A3-206ENST00000524028 SLC16A8O95907 504 aa17.88■□□□□ 0.45
PTP4A3-206ENST00000524028 ERVK-10P10266 1014 aa17.88■□□□□ 0.45
PTP4A3-206ENST00000524028 PNLIPRP1P54315 467 aa17.88■□□□□ 0.45
PTP4A3-206ENST00000524028 EMP3P54852 163 aa17.88■□□□□ 0.45
PTP4A3-206ENST00000524028 SNRPNP63162 240 aaKnown RBP17.88■□□□□ 0.45
PTP4A3-206ENST00000524028 PRDX1Q06830 199 aaKnown RBP17.88■□□□□ 0.45
PTP4A3-206ENST00000524028 MFAP5Q13361 173 aa17.88■□□□□ 0.45
PTP4A3-206ENST00000524028 CTBP1Q13363 440 aa17.88■□□□□ 0.45
PTP4A3-206ENST00000524028 TSTA3Q13630 321 aaPredicted RBP17.88■□□□□ 0.45
PTP4A3-206ENST00000524028 DHX34Q14147 1143 aaKnown RBP17.88■□□□□ 0.45
PTP4A3-206ENST00000524028 ELOAQ14241 798 aaKnown RBP17.88■□□□□ 0.45
PTP4A3-206ENST00000524028 ZNF169Q14929 603 aaPredicted RBP17.88■□□□□ 0.45
PTP4A3-206ENST00000524028 ARHGAP19Q14CB8 494 aa17.88■□□□□ 0.45
PTP4A3-206ENST00000524028 NAA25Q14CX7 972 aa17.88■□□□□ 0.45
PTP4A3-206ENST00000524028 ICE2Q659A1 982 aa17.88■□□□□ 0.45
PTP4A3-206ENST00000524028 ZNF787Q6DD87 383 aa17.88■□□□□ 0.45
PTP4A3-206ENST00000524028 ZNF425Q6IV72 752 aa17.88■□□□□ 0.45
PTP4A3-206ENST00000524028 CASC4Q6P4E1 433 aa17.88■□□□□ 0.45
PTP4A3-206ENST00000524028 ZNF549Q6P9A3 640 aa17.88■□□□□ 0.45
PTP4A3-206ENST00000524028 ISLR2Q6UXK2 745 aa17.88■□□□□ 0.45
PTP4A3-206ENST00000524028 DENND6AQ8IWF6 608 aa17.88■□□□□ 0.45
PTP4A3-206ENST00000524028 CSNK1A1LQ8N752 337 aa17.88■□□□□ 0.45
PTP4A3-206ENST00000524028 AMER2Q8N7J2 671 aa17.88■□□□□ 0.45
PTP4A3-206ENST00000524028 AMER3Q8N944 861 aa17.88■□□□□ 0.45
PTP4A3-206ENST00000524028 ST6GALNAC3Q8NDV1 305 aa17.88■□□□□ 0.45
PTP4A3-206ENST00000524028 TRIM58Q8NG06 486 aa17.88■□□□□ 0.45
PTP4A3-206ENST00000524028 GRHL3Q8TE85 626 aa17.88■□□□□ 0.45
PTP4A3-206ENST00000524028 ZNF480Q8WV37 535 aa17.88■□□□□ 0.45
PTP4A3-206ENST00000524028 C5orf34Q96MH7 638 aa17.88■□□□□ 0.45
PTP4A3-206ENST00000524028 AGPAT4Q9NRZ5 378 aa17.88■□□□□ 0.45
PTP4A3-206ENST00000524028 INTS10Q9NVR2 710 aaKnown RBP17.88■□□□□ 0.45
PTP4A3-206ENST00000524028 ZCWPW2A0A1B0GU75 182 aa17.87■□□□□ 0.45
PTP4A3-206ENST00000524028 FAM237BA0A1B0GVD1 139 aa17.87■□□□□ 0.45
PTP4A3-206ENST00000524028 E7ENX8 843 aa17.87■□□□□ 0.45
PTP4A3-206ENST00000524028 MAP2K7O14733 419 aa17.87■□□□□ 0.45
PTP4A3-206ENST00000524028 KRT14P02533 472 aa17.87■□□□□ 0.45
PTP4A3-206ENST00000524028 CATP04040 527 aaKnown RBP17.87■□□□□ 0.45
PTP4A3-206ENST00000524028 COX6A1P12074 109 aa17.87■□□□□ 0.45
PTP4A3-206ENST00000524028 PAMP19021 973 aa17.87■□□□□ 0.45
PTP4A3-206ENST00000524028 SLC26A3P40879 764 aa17.87■□□□□ 0.45
PTP4A3-206ENST00000524028 SARNPP82979 210 aaKnown RBP17.87■□□□□ 0.45
PTP4A3-206ENST00000524028 TAP2Q03519 686 aa17.87■□□□□ 0.45
PTP4A3-206ENST00000524028 CDC16Q13042 620 aa17.87■□□□□ 0.45
PTP4A3-206ENST00000524028 CUL1Q13616 776 aa17.87■□□□□ 0.45
PTP4A3-206ENST00000524028 DSG2Q14126 1118 aa17.87■□□□□ 0.45
PTP4A3-206ENST00000524028 TLR1Q15399 786 aa17.87■□□□□ 0.45
PTP4A3-206ENST00000524028 ZNF470Q6ECI4 717 aa17.87■□□□□ 0.45
PTP4A3-206ENST00000524028 CYHR1Q6ZMK1 362 aa17.87■□□□□ 0.45
PTP4A3-206ENST00000524028 LRRC56Q8IYG6 542 aaPredicted RBP17.87■□□□□ 0.45
PTP4A3-206ENST00000524028 AGGF1Q8N302 714 aaeCLIP17.87■□□□□ 0.45
PTP4A3-206ENST00000524028 PSMF1Q92530 271 aa17.87■□□□□ 0.45
PTP4A3-206ENST00000524028 ZNF669Q96BR6 464 aaPredicted RBP17.87■□□□□ 0.45
PTP4A3-206ENST00000524028 VPS50Q96JG6 964 aa17.87■□□□□ 0.45
PTP4A3-206ENST00000524028 LMF1Q96S06 567 aa17.87■□□□□ 0.45
PTP4A3-206ENST00000524028 EPS8L2Q9H6S3 715 aa17.87■□□□□ 0.45
PTP4A3-206ENST00000524028 FBXO6Q9NRD1 293 aaPredicted RBP17.87■□□□□ 0.45
PTP4A3-206ENST00000524028 FAM114A2Q9NRY5 505 aa17.87■□□□□ 0.45
PTP4A3-206ENST00000524028 TRPC4Q9UBN4 977 aa17.87■□□□□ 0.45
PTP4A3-206ENST00000524028 DOCK10Q96BY6 2186 aa17.87■□□□□ 0.45
PTP4A3-206ENST00000524028 IDSB3KWA1 339 aa17.86■□□□□ 0.45
PTP4A3-206ENST00000524028 GOLGA8MH3BSY2 632 aa17.86■□□□□ 0.45
PTP4A3-206ENST00000524028 P2RX6O15547 441 aa17.86■□□□□ 0.45
PTP4A3-206ENST00000524028 FOXS1O43638 330 aa17.86■□□□□ 0.45
PTP4A3-206ENST00000524028 PHF2O75151 1096 aa17.86■□□□□ 0.45
PTP4A3-206ENST00000524028 VPS26AO75436 327 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms