RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 MAPK12P53778 367 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 MFAP3P55082 362 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 ARL16Q0P5N6 197 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 ZBTB17Q13105 803 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 INAQ16352 499 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 DUOXA1Q1HG43 343 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 ASPRV1Q53RT3 343 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 LRRC73Q5JTD7 316 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 IRAK1BP1Q5VVH5 260 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 C11orf63Q6NUN7 778 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 FOXL2NBQ6ZUU3 175 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 ZNF771Q7L3S4 317 aaPredicted RBP3.79□□□□□ -1.8
SQLE-204ENST00000520493 CTAGE4Q8IX94 777 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.79□□□□□ -1.8
SQLE-204ENST00000520493 AMER3Q8N944 861 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 OR5M8Q8NGP6 311 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 LNX1Q8TBB1 728 aaPredicted RBP3.79□□□□□ -1.8
SQLE-204ENST00000520493 RNF128Q8TEB7 428 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 RIT1Q92963 219 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 BSCL2Q96G97 398 aaPredicted RBP3.79□□□□□ -1.8
SQLE-204ENST00000520493 GTPBP2Q9BX10 602 aaKnown RBP3.79□□□□□ -1.8
SQLE-204ENST00000520493 KRT23Q9C075 422 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 VN1R1Q9GZP7 353 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 NYXQ9GZU5 481 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 MMP28Q9H239 520 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 ARRDC1-AS1Q9H2J1 176 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 SRD5A3Q9H8P0 318 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 SDF2L1Q9HCN8 221 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 KLHL1Q9NR64 748 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 ZNF701Q9NV72 531 aaPredicted RBP3.79□□□□□ -1.8
SQLE-204ENST00000520493 OSER1Q9NX31 292 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 SPHK1Q9NYA1 384 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 LRWD1Q9UFC0 647 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 POU2F3Q9UKI9 436 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 MTUS1Q9ULD2 1270 aa3.79□□□□□ -1.8
SQLE-204ENST00000520493 RPH3AQ9Y2J0 694 aaPredicted RBP3.79□□□□□ -1.8
SQLE-204ENST00000520493 TRAV24A0A0B4J272 114 aa3.78□□□□□ -1.8
SQLE-204ENST00000520493 TRBV2A0A0J9YWF9 115 aa3.78□□□□□ -1.8
SQLE-204ENST00000520493 TEX13DA0A0J9YY54 714 aaPredicted RBP3.78□□□□□ -1.8
SQLE-204ENST00000520493 HYKKA2RU49 373 aa3.78□□□□□ -1.8
SQLE-204ENST00000520493 ZNF587BE7ETH6 402 aa3.78□□□□□ -1.8
SQLE-204ENST00000520493 FGF17O60258 216 aa3.78□□□□□ -1.8
SQLE-204ENST00000520493 NOL3O60936 208 aaKnown RBP3.78□□□□□ -1.8
SQLE-204ENST00000520493 FCGR3BO75015 233 aa3.78□□□□□ -1.8
SQLE-204ENST00000520493 TRIM16O95361 564 aa3.78□□□□□ -1.8
SQLE-204ENST00000520493 EPORP19235 508 aa3.78□□□□□ -1.8
SQLE-204ENST00000520493 MPZP25189 248 aa3.78□□□□□ -1.8
SQLE-204ENST00000520493 PTGER4P35408 488 aa3.78□□□□□ -1.8
SQLE-204ENST00000520493 ZNF132P52740 706 aa3.78□□□□□ -1.8
SQLE-204ENST00000520493 ATXN3P54252 364 aaPredicted RBP3.78□□□□□ -1.8
SQLE-204ENST00000520493 CLDN15P56746 228 aa3.78□□□□□ -1.8
SQLE-204ENST00000520493 HILS1P60008 231 aa3.78□□□□□ -1.8
SQLE-204ENST00000520493 POLR2FP61218 127 aaKnown RBP3.78□□□□□ -1.8
SQLE-204ENST00000520493 SLC20A2Q08357 652 aa3.78□□□□□ -1.8
SQLE-204ENST00000520493 GAMTQ14353 236 aa3.78□□□□□ -1.8
SQLE-204ENST00000520493 PDK1Q15118 436 aa3.78□□□□□ -1.8
SQLE-204ENST00000520493 NPTX1Q15818 432 aa3.78□□□□□ -1.8
SQLE-204ENST00000520493 KIF26BQ2KJY2 2108 aa3.78□□□□□ -1.8
SQLE-204ENST00000520493 KRTAP24-1Q3LI83 254 aa3.78□□□□□ -1.8
SQLE-204ENST00000520493 IQCCQ4KMZ1 466 aa3.78□□□□□ -1.8
SQLE-204ENST00000520493 NDUFAF5Q5TEU4 345 aa3.78□□□□□ -1.8
SQLE-204ENST00000520493 OR7E24Q6IFN5 339 aa3.78□□□□□ -1.8
SQLE-204ENST00000520493 GALNT17Q6IS24 598 aa3.78□□□□□ -1.8
SQLE-204ENST00000520493 NEK5Q6P3R8 708 aa3.78□□□□□ -1.8
SQLE-204ENST00000520493 PLXDC2Q6UX71 529 aa3.78□□□□□ -1.8
SQLE-204ENST00000520493 UNC5DQ6UXZ4 953 aa3.78□□□□□ -1.8
SQLE-204ENST00000520493 MEX3BQ6ZN04 569 aaKnown RBP3.78□□□□□ -1.8
SQLE-204ENST00000520493 KRTAP5-2Q701N4 177 aa3.78□□□□□ -1.8
SQLE-204ENST00000520493 TMPRSS11BQ86T26 416 aa3.78□□□□□ -1.8
SQLE-204ENST00000520493 ZNF441Q8N8Z8 693 aa3.78□□□□□ -1.8
SQLE-204ENST00000520493 ZBTB44Q8NCP5 570 aa3.78□□□□□ -1.8
SQLE-204ENST00000520493 LRRC8CQ8TDW0 803 aa3.78□□□□□ -1.8
SQLE-204ENST00000520493 ST7LQ8TDW4 575 aa3.78□□□□□ -1.8
SQLE-204ENST00000520493 SYN2Q92777 582 aaPredicted RBP3.78□□□□□ -1.8
SQLE-204ENST00000520493 SPATA33Q96N06 139 aa3.78□□□□□ -1.8
SQLE-204ENST00000520493 KLHL5Q96PQ7 755 aa3.78□□□□□ -1.8
SQLE-204ENST00000520493 FAM111AQ96PZ2 611 aa3.78□□□□□ -1.8
SQLE-204ENST00000520493 LIN28AQ9H9Z2 209 aaKnown RBP3.78□□□□□ -1.8
SQLE-204ENST00000520493 RNPEPL1Q9HAU8 725 aa3.78□□□□□ -1.8
SQLE-204ENST00000520493 Q9N2K0 584 aa3.78□□□□□ -1.8
SQLE-204ENST00000520493 DNAJC11Q9NVH1 559 aa3.78□□□□□ -1.8
SQLE-204ENST00000520493 TXNDC16Q9P2K2 825 aa3.78□□□□□ -1.8
SQLE-204ENST00000520493 B3GAT1Q9P2W7 334 aa3.78□□□□□ -1.8
SQLE-204ENST00000520493 MAD2L2Q9UI95 211 aa3.78□□□□□ -1.8
SQLE-204ENST00000520493 TDRKHQ9Y2W6 561 aaKnown RBP3.78□□□□□ -1.8
SQLE-204ENST00000520493 OR2W1Q9Y3N9 320 aa3.78□□□□□ -1.8
SQLE-204ENST00000520493 SPIN1Q9Y657 262 aaPredicted RBP3.78□□□□□ -1.8
SQLE-204ENST00000520493 C5orf60A6NFR6 353 aa3.77□□□□□ -1.81
SQLE-204ENST00000520493 DUXAA6NLW8 204 aa3.77□□□□□ -1.81
SQLE-204ENST00000520493 KBTBD13C9JR72 458 aa3.77□□□□□ -1.81
SQLE-204ENST00000520493 TTI1O43156 1089 aa3.77□□□□□ -1.81
SQLE-204ENST00000520493 CRCPO75575 148 aa3.77□□□□□ -1.81
SQLE-204ENST00000520493 RAD51DO75771 328 aa3.77□□□□□ -1.81
SQLE-204ENST00000520493 HEXBP07686 556 aa3.77□□□□□ -1.81
SQLE-204ENST00000520493 ARF4P18085 180 aaPredicted RBP3.77□□□□□ -1.81
SQLE-204ENST00000520493 CCND3P30281 292 aaPredicted RBP3.77□□□□□ -1.81
SQLE-204ENST00000520493 PSMC4P43686 418 aa3.77□□□□□ -1.81
SQLE-204ENST00000520493 IER3P46695 156 aa3.77□□□□□ -1.81
SQLE-204ENST00000520493 CDX1P47902 265 aaPredicted RBP3.77□□□□□ -1.81
SQLE-204ENST00000520493 RPS18P62269 152 aaKnown RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms