RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 ATP1A2P50993 1020 aa13.62□□□□□ -0.23
SDC2-203ENST00000519587 CCNG1P51959 295 aa13.62□□□□□ -0.23
SDC2-203ENST00000519587 RCN2Q14257 317 aa13.62□□□□□ -0.23
SDC2-203ENST00000519587 CHI3L2Q15782 390 aa13.62□□□□□ -0.23
SDC2-203ENST00000519587 TMEM71Q6P5X7 295 aa13.62□□□□□ -0.23
SDC2-203ENST00000519587 RBM44Q6ZP01 1051 aaKnown RBP13.62□□□□□ -0.23
SDC2-203ENST00000519587 FAM92BQ6ZTR7 304 aa13.62□□□□□ -0.23
SDC2-203ENST00000519587 USP53Q70EK8 1073 aa13.62□□□□□ -0.23
SDC2-203ENST00000519587 PRSS42Q7Z5A4 293 aa13.62□□□□□ -0.23
SDC2-203ENST00000519587 ADCK2Q7Z695 626 aa13.62□□□□□ -0.23
SDC2-203ENST00000519587 TMPRSS11BQ86T26 416 aa13.62□□□□□ -0.23
SDC2-203ENST00000519587 KMT5CQ86Y97 462 aa13.62□□□□□ -0.23
SDC2-203ENST00000519587 HOMEZQ8IX15 550 aa13.62□□□□□ -0.23
SDC2-203ENST00000519587 KIRREL3Q8IZU9 778 aa13.62□□□□□ -0.23
SDC2-203ENST00000519587 MDM1Q8TC05 714 aa13.62□□□□□ -0.23
SDC2-203ENST00000519587 ATP6V1E2Q96A05 226 aa13.62□□□□□ -0.23
SDC2-203ENST00000519587 ESAMQ96AP7 390 aa13.62□□□□□ -0.23
SDC2-203ENST00000519587 CNDP1Q96KN2 507 aa13.62□□□□□ -0.23
SDC2-203ENST00000519587 OR4K3Q96R72 315 aa13.62□□□□□ -0.23
SDC2-203ENST00000519587 NUDT22Q9BRQ3 303 aa13.62□□□□□ -0.23
SDC2-203ENST00000519587 EFCAB11Q9BUY7 163 aa13.62□□□□□ -0.23
SDC2-203ENST00000519587 PITPNM3Q9BZ71 974 aa13.62□□□□□ -0.23
SDC2-203ENST00000519587 SEMA6CQ9H3T2 930 aa13.62□□□□□ -0.23
SDC2-203ENST00000519587 EHD1Q9H4M9 534 aa13.62□□□□□ -0.23
SDC2-203ENST00000519587 ACTR8Q9H981 624 aa13.62□□□□□ -0.23
SDC2-203ENST00000519587 PELI2Q9HAT8 420 aa13.62□□□□□ -0.23
SDC2-203ENST00000519587 EML4Q9HC35 981 aaKnown RBP13.62□□□□□ -0.23
SDC2-203ENST00000519587 C1GALT1Q9NS00 363 aa13.62□□□□□ -0.23
SDC2-203ENST00000519587 SNX7Q9UNH6 387 aa13.62□□□□□ -0.23
SDC2-203ENST00000519587 ASB1Q9Y576 335 aa13.62□□□□□ -0.23
SDC2-203ENST00000519587 A0A1W2PQM1 296 aa13.61□□□□□ -0.23
SDC2-203ENST00000519587 TMX2-CTNND1H3BSU7 103 aa13.61□□□□□ -0.23
SDC2-203ENST00000519587 NTN3O00634 580 aaPredicted RBP13.61□□□□□ -0.23
SDC2-203ENST00000519587 UGDHO60701 494 aa13.61□□□□□ -0.23
SDC2-203ENST00000519587 FGF3P11487 239 aaPredicted RBP13.61□□□□□ -0.23
SDC2-203ENST00000519587 CDH1P12830 882 aa13.61□□□□□ -0.23
SDC2-203ENST00000519587 CXCR2P25025 360 aa13.61□□□□□ -0.23
SDC2-203ENST00000519587 GRK3P35626 688 aa13.61□□□□□ -0.23
SDC2-203ENST00000519587 NOVA1P51513 510 aaKnown RBP13.61□□□□□ -0.23
SDC2-203ENST00000519587 CCR8P51685 355 aa13.61□□□□□ -0.23
SDC2-203ENST00000519587 PKNOX1P55347 436 aa13.61□□□□□ -0.23
SDC2-203ENST00000519587 GFERP55789 205 aa13.61□□□□□ -0.23
SDC2-203ENST00000519587 IRF8Q02556 426 aa13.61□□□□□ -0.23
SDC2-203ENST00000519587 CLCQ05315 142 aa13.61□□□□□ -0.23
SDC2-203ENST00000519587 TRA2AQ13595 282 aaKnown RBP eCLIP13.61□□□□□ -0.231e-13■■□□□ 14.1
SDC2-203ENST00000519587 ZXDCQ2QGD7 858 aaPredicted RBP13.61□□□□□ -0.23
SDC2-203ENST00000519587 UNC50Q53HI1 259 aa13.61□□□□□ -0.23
SDC2-203ENST00000519587 XKR6Q5GH73 641 aa13.61□□□□□ -0.23
SDC2-203ENST00000519587 PAGE2BQ5JRK9 111 aa13.61□□□□□ -0.23
SDC2-203ENST00000519587 TRIM73Q86UV7 250 aa13.61□□□□□ -0.23
SDC2-203ENST00000519587 FLVCR1-AS1Q8TAF5 88 aa13.61□□□□□ -0.23
SDC2-203ENST00000519587 LRRC8CQ8TDW0 803 aa13.61□□□□□ -0.23
SDC2-203ENST00000519587 NEIL2Q969S2 332 aa13.61□□□□□ -0.23
SDC2-203ENST00000519587 PTCD3Q96EY7 689 aaKnown RBP13.61□□□□□ -0.23
SDC2-203ENST00000519587 TMEM74Q96NL1 305 aa13.61□□□□□ -0.23
SDC2-203ENST00000519587 ZNF382Q96SR6 550 aa13.61□□□□□ -0.23
SDC2-203ENST00000519587 AIF1LQ9BQI0 150 aa13.61□□□□□ -0.23
SDC2-203ENST00000519587 GATA5Q9BWX5 397 aaPredicted RBP13.61□□□□□ -0.23
SDC2-203ENST00000519587 GSTO2Q9H4Y5 243 aa13.61□□□□□ -0.23
SDC2-203ENST00000519587 IPPKQ9H8X2 491 aa13.61□□□□□ -0.23
SDC2-203ENST00000519587 SEMA4BQ9NPR2 832 aaPredicted RBP13.61□□□□□ -0.23
SDC2-203ENST00000519587 TMEM184CQ9NVA4 438 aa13.61□□□□□ -0.23
SDC2-203ENST00000519587 SOHLH2Q9NX45 425 aa13.61□□□□□ -0.23
SDC2-203ENST00000519587 KLHL3Q9UH77 587 aa13.61□□□□□ -0.23
SDC2-203ENST00000519587 ANGPTL2Q9UKU9 493 aa13.61□□□□□ -0.23
SDC2-203ENST00000519587 ATXN7L1Q9ULK2 861 aaPredicted RBP13.61□□□□□ -0.23
SDC2-203ENST00000519587 E7EQ34 232 aa13.6□□□□□ -0.23
SDC2-203ENST00000519587 HGSO14964 777 aaPredicted RBP13.6□□□□□ -0.23
SDC2-203ENST00000519587 ZBTB11O95625 1053 aaPredicted RBP13.6□□□□□ -0.23
SDC2-203ENST00000519587 HSPA4LO95757 839 aa13.6□□□□□ -0.23
SDC2-203ENST00000519587 ANKRD34CP0C6C1 535 aa13.6□□□□□ -0.23
SDC2-203ENST00000519587 HOXB3P14651 431 aaPredicted RBP13.6□□□□□ -0.23
SDC2-203ENST00000519587 EZRP15311 586 aaKnown RBP13.6□□□□□ -0.23
SDC2-203ENST00000519587 MAGP20916 626 aa13.6□□□□□ -0.23
SDC2-203ENST00000519587 BGNP21810 368 aa13.6□□□□□ -0.23
SDC2-203ENST00000519587 MLLT3P42568 568 aaPredicted RBP13.6□□□□□ -0.23
SDC2-203ENST00000519587 PPP1CAP62136 330 aa13.6□□□□□ -0.23
SDC2-203ENST00000519587 SIM1P81133 766 aaPredicted RBP13.6□□□□□ -0.23
SDC2-203ENST00000519587 PCDH1Q08174 1060 aa13.6□□□□□ -0.23
SDC2-203ENST00000519587 CHIT1Q13231 466 aa13.6□□□□□ -0.23
SDC2-203ENST00000519587 STX3Q13277 289 aa13.6□□□□□ -0.23
SDC2-203ENST00000519587 LAPTM5Q13571 262 aa13.6□□□□□ -0.23
SDC2-203ENST00000519587 TBCCQ15814 346 aa13.6□□□□□ -0.23
SDC2-203ENST00000519587 TMTC4Q5T4D3 741 aa13.6□□□□□ -0.23
SDC2-203ENST00000519587 CACHD1Q5VU97 1274 aa13.6□□□□□ -0.23
SDC2-203ENST00000519587 ATG9BQ674R7 924 aa13.6□□□□□ -0.23
SDC2-203ENST00000519587 NXPE4Q6UWF7 544 aa13.6□□□□□ -0.23
SDC2-203ENST00000519587 ZCCHC23Q6ZST2 131 aa13.6□□□□□ -0.23
SDC2-203ENST00000519587 GPRIN3Q6ZVF9 776 aa13.6□□□□□ -0.23
SDC2-203ENST00000519587 MYLK4Q86YV6 388 aaPredicted RBP13.6□□□□□ -0.23
SDC2-203ENST00000519587 KRT78Q8N1N4 520 aa13.6□□□□□ -0.23
SDC2-203ENST00000519587 C19orf47Q8N9M1 422 aaKnown RBP13.6□□□□□ -0.23
SDC2-203ENST00000519587 ABHD11Q8NFV4 315 aa13.6□□□□□ -0.23
SDC2-203ENST00000519587 TRPC4APQ8TEL6 797 aa13.6□□□□□ -0.23
SDC2-203ENST00000519587 UBE2E3Q969T4 207 aa13.6□□□□□ -0.23
SDC2-203ENST00000519587 ZUFSPQ96AP4 578 aa13.6□□□□□ -0.23
SDC2-203ENST00000519587 REPS1Q96D71 796 aa13.6□□□□□ -0.23
SDC2-203ENST00000519587 NSUN5Q96P11 429 aaKnown RBP13.6□□□□□ -0.23
SDC2-203ENST00000519587 MAP3K3Q99759 626 aa13.6□□□□□ -0.23
SDC2-203ENST00000519587 DPH7Q9BTV6 452 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms