RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-210	ENST00000519362	APOF	Q13790	326 aa		11.97	□□□□□ -0.49
SPIDR-210	ENST00000519362	SHH	Q15465	462 aa		11.97	□□□□□ -0.49
SPIDR-210	ENST00000519362	UGT8	Q16880	541 aa		11.97	□□□□□ -0.49
SPIDR-210	ENST00000519362	PGS1	Q32NB8	556 aa		11.97	□□□□□ -0.49
SPIDR-210	ENST00000519362	FAM98B	Q52LJ0	330 aa	Known RBP	11.97	□□□□□ -0.49
SPIDR-210	ENST00000519362	ADNP2	Q6IQ32	1131 aa		11.97	□□□□□ -0.49
SPIDR-210	ENST00000519362	CAPN13	Q6MZZ7	669 aa	Predicted RBP	11.97	□□□□□ -0.49
SPIDR-210	ENST00000519362	IYD	Q6PHW0	289 aa		11.97	□□□□□ -0.49
SPIDR-210	ENST00000519362	ANKRD46	Q86W74	232 aa		11.97	□□□□□ -0.49
SPIDR-210	ENST00000519362	SYT12	Q8IV01	421 aa		11.97	□□□□□ -0.49
SPIDR-210	ENST00000519362	MICU2	Q8IYU8	434 aa		11.97	□□□□□ -0.49
SPIDR-210	ENST00000519362	PHACTR4	Q8IZ21	702 aa		11.97	□□□□□ -0.49
SPIDR-210	ENST00000519362	C10orf111	Q8N326	155 aa		11.97	□□□□□ -0.49
SPIDR-210	ENST00000519362	OR8J2	Q8NGG1	315 aa		11.97	□□□□□ -0.49
SPIDR-210	ENST00000519362	FIG4	Q92562	907 aa		11.97	□□□□□ -0.49
SPIDR-210	ENST00000519362	BDH2	Q9BUT1	245 aa		11.97	□□□□□ -0.49
SPIDR-210	ENST00000519362	SGPP1	Q9BX95	441 aa		11.97	□□□□□ -0.49
SPIDR-210	ENST00000519362	MRPS26	Q9BYN8	205 aa	Known RBP	11.97	□□□□□ -0.49
SPIDR-210	ENST00000519362	PLA2G2F	Q9BZM2	168 aa		11.97	□□□□□ -0.49
SPIDR-210	ENST00000519362	CARS2	Q9HA77	564 aa	Known RBP	11.97	□□□□□ -0.49
SPIDR-210	ENST00000519362	NTN4	Q9HB63	628 aa		11.97	□□□□□ -0.49
SPIDR-210	ENST00000519362	CDH7	Q9ULB5	785 aa		11.97	□□□□□ -0.49
SPIDR-210	ENST00000519362	PADI4	Q9UM07	663 aa		11.97	□□□□□ -0.49
SPIDR-210	ENST00000519362		V9GYQ6	96 aa		11.97	□□□□□ -0.49
SPIDR-210	ENST00000519362	C5orf42	Q9H799	3197 aa		11.97	□□□□□ -0.49
SPIDR-210	ENST00000519362	RNF103-CHMP3	A0A140T963	221 aa		11.96	□□□□□ -0.49
SPIDR-210	ENST00000519362	MGAT4D	A6NG13	374 aa		11.96	□□□□□ -0.49
SPIDR-210	ENST00000519362	UPK1A	O00322	258 aa		11.96	□□□□□ -0.49
SPIDR-210	ENST00000519362	PLOD2	O00469	737 aa		11.96	□□□□□ -0.49
SPIDR-210	ENST00000519362	CXCR6	O00574	342 aa		11.96	□□□□□ -0.49
SPIDR-210	ENST00000519362	CLOCK	O15516	846 aa		11.96	□□□□□ -0.49
SPIDR-210	ENST00000519362	MT-ND1	P03886	318 aa		11.96	□□□□□ -0.49
SPIDR-210	ENST00000519362	DRD3	P35462	400 aa		11.96	□□□□□ -0.49
SPIDR-210	ENST00000519362	PNLIPRP1	P54315	467 aa		11.96	□□□□□ -0.49
SPIDR-210	ENST00000519362	WNT3	P56703	355 aa		11.96	□□□□□ -0.49
SPIDR-210	ENST00000519362	RAE1	P78406	368 aa	Known RBP	11.96	□□□□□ -0.49
SPIDR-210	ENST00000519362	SRSF11	Q05519	484 aa	Known RBP	11.96	□□□□□ -0.49
SPIDR-210	ENST00000519362	MERTK	Q12866	999 aa		11.96	□□□□□ -0.49
SPIDR-210	ENST00000519362	DDX39B	Q13838	428 aa	Known RBP	11.96	□□□□□ -0.49
SPIDR-210	ENST00000519362	MAP7	Q14244	749 aa		11.96	□□□□□ -0.49
SPIDR-210	ENST00000519362	EGFLAM	Q63HQ2	1017 aa		11.96	□□□□□ -0.49
SPIDR-210	ENST00000519362	OR4F3	Q6IEY1	312 aa		11.96	□□□□□ -0.49
SPIDR-210	ENST00000519362	ISLR2	Q6UXK2	745 aa		11.96	□□□□□ -0.49
SPIDR-210	ENST00000519362	ADAMTSL4	Q6UY14	1074 aa		11.96	□□□□□ -0.49
SPIDR-210	ENST00000519362	GCNT7	Q6ZNI0	430 aa		11.96	□□□□□ -0.49
SPIDR-210	ENST00000519362	PLA2G15	Q8NCC3	412 aa		11.96	□□□□□ -0.49
SPIDR-210	ENST00000519362	OR9A1P	Q8NGU1	263 aa		11.96	□□□□□ -0.49
SPIDR-210	ENST00000519362	HUS1B	Q8NHY5	278 aa		11.96	□□□□□ -0.49
SPIDR-210	ENST00000519362	HM13	Q8TCT9	377 aa		11.96	□□□□□ -0.49
SPIDR-210	ENST00000519362	GFM2	Q969S9	779 aa	Known RBP	11.96	□□□□□ -0.49
SPIDR-210	ENST00000519362	AURKB	Q96GD4	344 aa	Predicted RBP	11.96	□□□□□ -0.49
SPIDR-210	ENST00000519362	HIC2	Q96JB3	615 aa		11.96	□□□□□ -0.49
SPIDR-210	ENST00000519362	PRPF18	Q99633	342 aa	Known RBP	11.96	□□□□□ -0.49
SPIDR-210	ENST00000519362	TBCD	Q9BTW9	1192 aa		11.96	□□□□□ -0.49
SPIDR-210	ENST00000519362	ADI1	Q9BV57	179 aa		11.96	□□□□□ -0.49
SPIDR-210	ENST00000519362	UGT2B28	Q9BY64	529 aa		11.96	□□□□□ -0.49
SPIDR-210	ENST00000519362	REXO4	Q9GZR2	422 aa	Known RBP	11.96	□□□□□ -0.49
SPIDR-210	ENST00000519362	EPB41L1	Q9H4G0	881 aa		11.96	□□□□□ -0.49
SPIDR-210	ENST00000519362	ITM2C	Q9NQX7	267 aa		11.96	□□□□□ -0.49
SPIDR-210	ENST00000519362	OLAH	Q9NV23	265 aa		11.96	□□□□□ -0.49
SPIDR-210	ENST00000519362	ADGRE2	Q9UHX3	823 aa		11.96	□□□□□ -0.49
SPIDR-210	ENST00000519362	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	11.96	□□□□□ -0.49
SPIDR-210	ENST00000519362	MYOCOS	A0A1B0GUC4	107 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	RFXANK	O14593	260 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	EI24	O14681	340 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	GSTA4	O15217	222 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	PGM3	O95394	542 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	CLPTM1	O96005	669 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	GSN	P06396	782 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	RET	P07949	1114 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	MYF6	P23409	242 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	RPL5	P46777	297 aa	Known RBP	11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	TRPC1	P48995	793 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	TAP2	Q03519	686 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	CHRNB3	Q05901	458 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	ACSM2A	Q08AH3	577 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	ABHD18	Q0P651	414 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	ENPP2	Q13822	863 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	NFE2L1	Q14494	772 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	SLC36A3	Q495N2	470 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	C10orf62	Q5T681	223 aa	Predicted RBP	11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	FAM46C	Q5VWP2	391 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	ACSM2B	Q68CK6	577 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	SYCE2	Q6PIF2	218 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	TMEM184A	Q6ZMB5	413 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	ZNF551	Q7Z340	670 aa	Predicted RBP	11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	TRMT11	Q7Z4G4	463 aa	Known RBP	11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	LAS2	Q8IYD9	372 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	SYTL1	Q8IYJ3	562 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	FAM86B1	Q8N7N1	296 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	OR7A2P	Q8NGA2	310 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	CHTF18	Q8WVB6	975 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	NELL1	Q92832	810 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	REXO5	Q96IC2	774 aa	Known RBP	11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	ZDHHC5	Q9C0B5	715 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	OR52A5	Q9H2C5	316 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	PNPLA3	Q9NST1	481 aa		11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	DCAF13	Q9NV06	445 aa	Known RBP	11.95	□□□□□ -0.5
SPIDR-210	ENST00000519362	SMIM31	A0A1B0GVY4	71 aa		11.95	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms