RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 IFI30P13284 250 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 DPEP1P16444 411 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 PAMP19021 973 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 HK1P19367 917 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 CAPN3P20807 821 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 MYL9P24844 172 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 RPS19P39019 145 aaKnown RBP4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 RPS9P46781 194 aaKnown RBP4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 ZNF143P52747 638 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 CXCR4P61073 352 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 HNRNPKP61978 463 aaKnown RBP eCLIP4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 HERVK_113P63132 956 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 GLO1Q04760 184 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 TDGQ13569 410 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 DDX39BQ13838 428 aaKnown RBP4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 VEPH1Q14D04 833 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 CHI3L2Q15782 390 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 ATP6AP1Q15904 470 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 CARTPTQ16568 116 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 HADHQ16836 314 aaKnown RBP4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 MICBQ29980 383 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 MTHFSDQ2M296 383 aaKnown RBP4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 PLEKHN1Q494U1 663 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 TOR1AIP1Q5JTV8 583 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 CDKL4Q5MAI5 379 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 TPRG1LQ5T0D9 272 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 ANKRD22Q5VYY1 191 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 MRM1Q6IN84 353 aaKnown RBP4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 PRR5LQ6MZQ0 368 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 RPL13AP3Q6NVV1 102 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 PLET1Q6UQ28 207 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 HACD2Q6Y1H2 254 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 RTL4Q6ZR62 310 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 DENND5BQ6ZUT9 1274 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 EIF3MQ7L2H7 374 aaKnown RBP4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 CHST3Q7LGC8 479 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 STRADAQ7RTN6 431 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 HSD17B13Q7Z5P4 300 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 DPPA2Q7Z7J5 298 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 SYVN1Q86TM6 617 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 GGNQ86UU5 652 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 SLC26A11Q86WA9 606 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 TRIM69Q86WT6 500 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 MICU3Q86XE3 530 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 CCDC71Q8IV32 467 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 RDH10Q8IZV5 341 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 GHDCQ8N2G8 530 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 SVOPLQ8N434 492 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 CELF2-AS1Q8N7Q2 184 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 SETD9Q8NE22 299 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 ZSWIM2Q8NEG5 633 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 NLGN2Q8NFZ4 835 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 OR5T1Q8NG75 326 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 OR6M1Q8NGM8 313 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 OR2T34Q8NGX1 318 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 OR2T3Q8NH03 318 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 AGR3Q8TD06 166 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 IGDCC4Q8TDY8 1250 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 TFB1MQ8WVM0 346 aaKnown RBP4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 TCTEX1D2Q8WW35 142 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 NSMAFQ92636 917 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 STAMQ92783 540 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 LGALS12Q96DT0 336 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 KAZALD1Q96I82 304 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 Q96MT0 163 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 PFDN5Q99471 154 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 PAFAH2Q99487 392 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 AGAP2Q99490 1192 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 IL12RB2Q99665 862 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 SH2D3AQ9BRG2 576 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 COPS4Q9BT78 406 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 SLC25A23Q9BV35 468 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 ZDHHC5Q9C0B5 715 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 TINAGL1Q9GZM7 467 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 SLIRPQ9GZT3 109 aaKnown RBP4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 NXF2Q9GZY0 626 aaKnown RBP4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 NAA50Q9GZZ1 169 aaKnown RBP4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 FAM49AQ9H0Q0 323 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 KCNH6Q9H252 994 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 MIXL1Q9H2W2 232 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 NT5DC2Q9H857 520 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 RNF121Q9H920 327 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 RSAD1Q9HA92 442 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 MYOZ1Q9NP98 299 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 GPRC5CQ9NQ84 441 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 NIT2Q9NQR4 276 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 PLSCR3Q9NRY6 295 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 GJB4Q9NTQ9 266 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 CLEC1BQ9P126 229 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 ERVK-18Q9QC07 812 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 ARPP21Q9UBL0 812 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 SEC14L4Q9UDX3 406 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 SCP2D1Q9UJQ7 156 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 ANAPC7Q9UJX3 599 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 MGAT4AQ9UM21 535 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 PLA2G2DQ9UNK4 145 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 USP22Q9UPT9 525 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 GAB2Q9UQC2 676 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 PDE10AQ9Y233 779 aa4.68□□□□□ -1.66
HMGB1P19-201ENST00000517578 DLGAP4Q9Y2H0 992 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms