RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 MRPL13Q9BYD1 178 aaKnown RBP3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 SLC2A11Q9BYW1 496 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 SLC39A8Q9C0K1 460 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 NACA2Q9H009 215 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 TRPV6Q9H1D0 765 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 DPEP3Q9H4B8 488 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 MVB12BQ9H7P6 319 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 ACTR5Q9H9F9 607 aaPredicted RBP3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 MEAF6Q9HAF1 191 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 GALNT9Q9HCQ5 603 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 TRPM5Q9NZQ8 1165 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 SPATA7Q9P0W8 599 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 RHCGQ9UBD6 479 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 RUVBL2Q9Y230 463 aaKnown RBP3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 NFE2L3Q9Y4A8 694 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 WNT6Q9Y6F9 365 aa3.78□□□□□ -1.8
RNU4-60P-201ENST00000517239 ADGRA2Q96PE1 1338 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 LOC100506127A0A0U1RQW1 187 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 OR6C74A6NCV1 312 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 ASB14A6NK59 587 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 HSBP1L1C9JCN9 74 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 RNMTO43148 476 aaKnown RBP3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 NME2P1O60361 137 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 LGI1O95970 557 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 TOP3BO95985 862 aaKnown RBP3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 MT-ND1P03886 318 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 IVLP07476 585 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 SP9P0CG40 484 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 SMIM18P0DKX4 95 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 CBSLP0DN79 551 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 ERVK-10P10266 1014 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 SLC2A3P11169 496 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 B4GALT1P15291 398 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 CR2P20023 1033 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 HNF1AP20823 631 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 S1PR1P21453 382 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 ELAVL4P26378 380 aaKnown RBP3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 HTR2AP28223 471 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 CD1BP29016 333 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 HIBADHP31937 336 aaKnown RBP3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 CA8P35219 290 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 CBSP35520 551 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 ME1P48163 572 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 STARP49675 285 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 METAP2P50579 478 aaKnown RBP eCLIP3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 SOX10P56693 466 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 CD81P60033 236 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 DSC1Q08554 894 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 BNIP1Q12981 228 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 CUL3Q13618 768 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 KPNB1Q14974 876 aaKnown RBP3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 PTGISQ16647 500 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 CLPPQ16740 277 aaPredicted RBP3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 KIF19Q2TAC6 998 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 Q3ZCU0 254 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 CERKLQ49MI3 558 aaPredicted RBP3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 DCAF6Q58WW2 860 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 RNASE12Q5GAN4 147 aaKnown RBP3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 PIP5KL1Q5T9C9 394 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 ATF7IP2Q5U623 682 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 TCERG1LQ5VWI1 586 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 IL23RQ5VWK5 629 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 GGNBP1Q5YKI7 109 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 SEL1L3Q68CR1 1132 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 ASPHD2Q6ICH7 369 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 FAM166AQ6J272 317 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 TMPRSS11FQ6ZWK6 438 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 ANO5Q75V66 913 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 AMIGO1Q86WK6 493 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 CDR2LQ86X02 465 aaPredicted RBP3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 FAM131BQ86XD5 332 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 TMC8Q8IU68 726 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 KBTBD2Q8IY47 623 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 MYOCDQ8IZQ8 938 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 OFCC1Q8IZS5 231 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 LCORLQ8N3X6 602 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 LRRC17Q8N6Y2 441 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 EMC1Q8N766 993 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 FAM47BQ8NA70 645 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 CMASQ8NFW8 434 aaPredicted RBP3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 RP9Q8TA86 221 aaKnown RBP3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 U2AF1L4Q8WU68 220 aaKnown RBP3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 TRIB2Q92519 343 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 PIGBQ92521 554 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 LARP4BQ92615 738 aaKnown RBP3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 PROX1Q92786 737 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 EDAQ92838 391 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 WBP2Q969T9 261 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 MARK4Q96L34 752 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 ZNF48Q96MX3 618 aaPredicted RBP3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 PANX2Q96RD6 677 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 CCNL2Q96S94 520 aaPredicted RBP3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 MNTQ99583 582 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 GFI1Q99684 422 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 NPAS2Q99743 824 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 CITED1Q99966 193 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 NTMT1Q9BV86 223 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 WWP1Q9H0M0 922 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 MAGT1Q9H0U3 335 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms