RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 NXPE4Q6UWF7 544 aa12.4□□□□□ -0.42
PVT1-203ENST00000513868 ABRAXAS1Q6UWZ7 409 aa12.4□□□□□ -0.42
PVT1-203ENST00000513868 LAYNQ6UX15 382 aa12.4□□□□□ -0.42
PVT1-203ENST00000513868 LAS2Q8IYD9 372 aa12.4□□□□□ -0.42
PVT1-203ENST00000513868 SIX5Q8N196 739 aa12.4□□□□□ -0.42
PVT1-203ENST00000513868 LIX1Q8N485 282 aa12.4□□□□□ -0.42
PVT1-203ENST00000513868 OR13H1Q8NG92 308 aa12.4□□□□□ -0.42
PVT1-203ENST00000513868 CCL4L1Q8NHW4 92 aa12.4□□□□□ -0.42
PVT1-203ENST00000513868 RLN3Q8WXF3 142 aa12.4□□□□□ -0.42
PVT1-203ENST00000513868 ROPN1LQ96C74 230 aa12.4□□□□□ -0.42
PVT1-203ENST00000513868 SHDQ96IW2 340 aa12.4□□□□□ -0.42
PVT1-203ENST00000513868 MTERF1Q99551 399 aaKnown RBP12.4□□□□□ -0.42
PVT1-203ENST00000513868 BRF2Q9HAW0 419 aa12.4□□□□□ -0.42
PVT1-203ENST00000513868 IMP3Q9NV31 184 aaKnown RBP12.4□□□□□ -0.42
PVT1-203ENST00000513868 NKX1-2Q9UD57 310 aaPredicted RBP12.4□□□□□ -0.42
PVT1-203ENST00000513868 TBC1D29Q9UFV1 150 aa12.4□□□□□ -0.42
PVT1-203ENST00000513868 FBXL21Q9UKT6 434 aa12.4□□□□□ -0.42
PVT1-203ENST00000513868 C19orf67A6NJJ6 358 aa12.39□□□□□ -0.43
PVT1-203ENST00000513868 MAGEB17A8MXT2 336 aa12.39□□□□□ -0.43
PVT1-203ENST00000513868 TOR1BO14657 336 aa12.39□□□□□ -0.43
PVT1-203ENST00000513868 ANGPT2O15123 496 aa12.39□□□□□ -0.43
PVT1-203ENST00000513868 CIB2O75838 187 aa12.39□□□□□ -0.43
PVT1-203ENST00000513868 AK4P27144 223 aaPredicted RBP12.39□□□□□ -0.43
PVT1-203ENST00000513868 SRP54P61011 504 aaKnown RBP12.39□□□□□ -0.43
PVT1-203ENST00000513868 SLBPQ14493 270 aaKnown RBP eCLIP12.39□□□□□ -0.43
PVT1-203ENST00000513868 C1orf146Q5VVC0 180 aa12.39□□□□□ -0.43
PVT1-203ENST00000513868 MED27Q6P2C8 311 aa12.39□□□□□ -0.43
PVT1-203ENST00000513868 WASH2PQ6VEQ5 465 aa12.39□□□□□ -0.43
PVT1-203ENST00000513868 RD3Q7Z3Z2 195 aa12.39□□□□□ -0.43
PVT1-203ENST00000513868 FAM129CQ86XR2 697 aa12.39□□□□□ -0.43
PVT1-203ENST00000513868 NRROSQ86YC3 692 aa12.39□□□□□ -0.43
PVT1-203ENST00000513868 ENDOVQ8N8Q3 282 aaKnown RBP12.39□□□□□ -0.43
PVT1-203ENST00000513868 PCYOX1LQ8NBM8 494 aa12.39□□□□□ -0.43
PVT1-203ENST00000513868 HUS1BQ8NHY5 278 aa12.39□□□□□ -0.43
PVT1-203ENST00000513868 NELL2Q99435 816 aa12.39□□□□□ -0.43
PVT1-203ENST00000513868 SLC39A3Q9BRY0 314 aa12.39□□□□□ -0.43
PVT1-203ENST00000513868 HAUS8Q9BT25 410 aa12.39□□□□□ -0.43
PVT1-203ENST00000513868 EFCAB11Q9BUY7 163 aa12.39□□□□□ -0.43
PVT1-203ENST00000513868 TPSD1Q9BZJ3 242 aa12.39□□□□□ -0.43
PVT1-203ENST00000513868 TMEM168Q9H0V1 697 aa12.39□□□□□ -0.43
PVT1-203ENST00000513868 CHRDQ9H2X0 955 aa12.39□□□□□ -0.43
PVT1-203ENST00000513868 RNPEPL1Q9HAU8 725 aa12.39□□□□□ -0.43
PVT1-203ENST00000513868 WASH6PQ9NQA3 447 aa12.39□□□□□ -0.43
PVT1-203ENST00000513868 GPR27Q9NS67 375 aa12.39□□□□□ -0.43
PVT1-203ENST00000513868 TMEM181Q9P2C4 612 aa12.39□□□□□ -0.43
PVT1-203ENST00000513868 CROTQ9UKG9 612 aa12.39□□□□□ -0.43
PVT1-203ENST00000513868 PCOLCE2Q9UKZ9 415 aa12.39□□□□□ -0.43
PVT1-203ENST00000513868 DMTF1Q9Y222 760 aa12.39□□□□□ -0.43
PVT1-203ENST00000513868 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.39□□□□□ -0.43
PVT1-203ENST00000513868 SLCO1B1Q9Y6L6 691 aa12.39□□□□□ -0.43
PVT1-203ENST00000513868 PIPSLA2A3N6 862 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 CCDC154A6NI56 674 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 PDZK1P1A8MUH7 402 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 ZNF217O75362 1048 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 MTHFD1P11586 935 aaKnown RBP12.38□□□□□ -0.43
PVT1-203ENST00000513868 CDH1P12830 882 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 HSD3B1P14060 373 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 ACPPP15309 386 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 SDC1P18827 310 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 TACR1P25103 407 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 HSD3B2P26439 372 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 RABIFP47224 123 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 MEF2AQ02078 507 aaPredicted RBP12.38□□□□□ -0.43
PVT1-203ENST00000513868 DDX39BQ13838 428 aaKnown RBP12.38□□□□□ -0.43
PVT1-203ENST00000513868 CCNIQ14094 377 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 THEMIS2Q5TEJ8 643 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 CACHD1Q5VU97 1274 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 MINDY1Q8N5J2 469 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 KRTCAP2Q8N6L1 136 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 RNF148Q8N7C7 305 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 ZNF740Q8NDX6 193 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 SMPDL3AQ92484 453 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 CCDC124Q96CT7 223 aaKnown RBP12.38□□□□□ -0.43
PVT1-203ENST00000513868 MVB12BQ9H7P6 319 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 VPS29Q9UBQ0 182 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 CD300AQ9UGN4 299 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 TAC3Q9UHF0 121 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 TMED5Q9Y3A6 229 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 A0A1W2PPC4 97 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 A6NCN8 305 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 FOXE1O00358 373 aaPredicted RBP12.38□□□□□ -0.43
PVT1-203ENST00000513868 KRT36O76013 467 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 PSMG1O95456 288 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 PCNAP12004 261 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 XRCC1P18887 633 aaPredicted RBP12.38□□□□□ -0.43
PVT1-203ENST00000513868 PSMB5P28074 263 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 PKLRP30613 574 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 RAB28P51157 221 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 DGKQP52824 942 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 CLDN8P56748 225 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 MS4A2Q01362 244 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 TCEA2Q15560 299 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 TIGD2Q4W5G0 525 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 PAGE2BQ5JRK9 111 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 NOXRED1Q6NXP6 359 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 DPP10Q8N608 796 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 OR52E1Q8NGJ3 308 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 OR2L8Q8NGY9 312 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 CLDN23Q96B33 292 aa12.38□□□□□ -0.43
PVT1-203ENST00000513868 LRRC58Q96CX6 371 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms