RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.67□□□□□ -0.06
TPM3-219ENST00000509409 OR2A25A4D2G3 310 aa14.67□□□□□ -0.06
TPM3-219ENST00000509409 GOLGA8MH3BSY2 632 aa14.67□□□□□ -0.06
TPM3-219ENST00000509409 MAP2K7O14733 419 aa14.67□□□□□ -0.06
TPM3-219ENST00000509409 PSIP1O75475 530 aaKnown RBP14.67□□□□□ -0.06
TPM3-219ENST00000509409 CCNDBP1O95273 360 aa14.67□□□□□ -0.06
TPM3-219ENST00000509409 ACPPP15309 386 aa14.67□□□□□ -0.06
TPM3-219ENST00000509409 CXCR2P25025 360 aa14.67□□□□□ -0.06
TPM3-219ENST00000509409 EMP2P54851 167 aa14.67□□□□□ -0.06
TPM3-219ENST00000509409 CTBP1Q13363 440 aa14.67□□□□□ -0.06
TPM3-219ENST00000509409 ARHGAP19Q14CB8 494 aa14.67□□□□□ -0.06
TPM3-219ENST00000509409 VWA2Q5GFL6 755 aa14.67□□□□□ -0.06
TPM3-219ENST00000509409 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.67□□□□□ -0.06
TPM3-219ENST00000509409 THEMIS2Q5TEJ8 643 aa14.67□□□□□ -0.06
TPM3-219ENST00000509409 ZNF470Q6ECI4 717 aa14.67□□□□□ -0.06
TPM3-219ENST00000509409 LINC00696Q6ZRV3 163 aa14.67□□□□□ -0.06
TPM3-219ENST00000509409 ADCK2Q7Z695 626 aa14.67□□□□□ -0.06
TPM3-219ENST00000509409 CAND1Q86VP6 1230 aaKnown RBP14.67□□□□□ -0.06
TPM3-219ENST00000509409 REXO1L1PQ8IX06 675 aa14.67□□□□□ -0.06
TPM3-219ENST00000509409 CSNK1A1LQ8N752 337 aa14.67□□□□□ -0.06
TPM3-219ENST00000509409 PPFIBP2Q8ND30 876 aa14.67□□□□□ -0.06
TPM3-219ENST00000509409 PPP4R1Q8TF05 950 aa14.67□□□□□ -0.06
TPM3-219ENST00000509409 RERGQ96A58 199 aaPredicted RBP14.67□□□□□ -0.06
TPM3-219ENST00000509409 C8orf44Q96CB5 159 aa14.67□□□□□ -0.06
TPM3-219ENST00000509409 TRIM56Q9BRZ2 755 aaKnown RBP14.67□□□□□ -0.06
TPM3-219ENST00000509409 ZNF160Q9HCG1 818 aa14.67□□□□□ -0.06
TPM3-219ENST00000509409 TRPC4Q9UBN4 977 aa14.67□□□□□ -0.06
TPM3-219ENST00000509409 TAC3Q9UHF0 121 aa14.67□□□□□ -0.06
TPM3-219ENST00000509409 CSAG2Q9Y5P2 127 aa14.67□□□□□ -0.06
TPM3-219ENST00000509409 MAD1L1Q9Y6D9 718 aa14.67□□□□□ -0.06
TPM3-219ENST00000509409 FER1L5A0AVI2 2057 aa14.66□□□□□ -0.06
TPM3-219ENST00000509409 FAM237BA0A1B0GVD1 139 aa14.66□□□□□ -0.06
TPM3-219ENST00000509409 MYO1CO00159 1063 aa14.66□□□□□ -0.06
TPM3-219ENST00000509409 PRPF4O43172 522 aaKnown RBP eCLIP14.66□□□□□ -0.06
TPM3-219ENST00000509409 ZBTB14O43829 449 aa14.66□□□□□ -0.06
TPM3-219ENST00000509409 PHF2O75151 1096 aa14.66□□□□□ -0.06
TPM3-219ENST00000509409 HPP00738 406 aa14.66□□□□□ -0.06
TPM3-219ENST00000509409 HEXBP07686 556 aa14.66□□□□□ -0.06
TPM3-219ENST00000509409 UQCRHP07919 91 aa14.66□□□□□ -0.06
TPM3-219ENST00000509409 F7P08709 466 aaPredicted RBP14.66□□□□□ -0.06
TPM3-219ENST00000509409 ANXA5P08758 320 aa14.66□□□□□ -0.06
TPM3-219ENST00000509409 RNF224P0DH78 156 aa14.66□□□□□ -0.06
TPM3-219ENST00000509409 MLNP12872 115 aa14.66□□□□□ -0.06
TPM3-219ENST00000509409 MAGEA6P43360 314 aa14.66□□□□□ -0.06
TPM3-219ENST00000509409 CLCN7P51798 805 aa14.66□□□□□ -0.06
TPM3-219ENST00000509409 PRDX1Q06830 199 aaKnown RBP14.66□□□□□ -0.06
TPM3-219ENST00000509409 CDC16Q13042 620 aa14.66□□□□□ -0.06
TPM3-219ENST00000509409 CUL1Q13616 776 aa14.66□□□□□ -0.06
TPM3-219ENST00000509409 PRTGQ2VWP7 1150 aa14.66□□□□□ -0.06
TPM3-219ENST00000509409 CRB2Q5IJ48 1285 aa14.66□□□□□ -0.06
TPM3-219ENST00000509409 ARMC3Q5W041 872 aa14.66□□□□□ -0.06
TPM3-219ENST00000509409 ICE2Q659A1 982 aa14.66□□□□□ -0.06
TPM3-219ENST00000509409 ISLR2Q6UXK2 745 aa14.66□□□□□ -0.06
TPM3-219ENST00000509409 LAPTM4BQ86VI4 370 aa14.66□□□□□ -0.06
TPM3-219ENST00000509409 PAQR7Q86WK9 346 aa14.66□□□□□ -0.06
TPM3-219ENST00000509409 DENND6AQ8IWF6 608 aa14.66□□□□□ -0.06
TPM3-219ENST00000509409 COG1Q8WTW3 980 aa14.66□□□□□ -0.06
TPM3-219ENST00000509409 MMABQ96EY8 250 aaPredicted RBP14.66□□□□□ -0.06
TPM3-219ENST00000509409 MS4A14Q96JA4 679 aa14.66□□□□□ -0.06
TPM3-219ENST00000509409 PBKQ96KB5 322 aa14.66□□□□□ -0.06
TPM3-219ENST00000509409 C10orf90Q96M02 699 aa14.66□□□□□ -0.06
TPM3-219ENST00000509409 C5orf34Q96MH7 638 aa14.66□□□□□ -0.06
TPM3-219ENST00000509409 SLC30A3Q99726 388 aa14.66□□□□□ -0.06
TPM3-219ENST00000509409 XAB2Q9HCS7 855 aaKnown RBP14.66□□□□□ -0.06
TPM3-219ENST00000509409 C20orf96Q9NUD7 363 aaPredicted RBP14.66□□□□□ -0.06
TPM3-219ENST00000509409 ERRFI1Q9UJM3 462 aaPredicted RBP14.66□□□□□ -0.06
TPM3-219ENST00000509409 NOVA2Q9UNW9 492 aaKnown RBP14.66□□□□□ -0.06
TPM3-219ENST00000509409 RUVBL1Q9Y265 456 aaKnown RBP14.66□□□□□ -0.06
TPM3-219ENST00000509409 SLC5A6Q9Y289 635 aa14.66□□□□□ -0.06
TPM3-219ENST00000509409 PPP2R2CQ9Y2T4 447 aa14.66□□□□□ -0.06
TPM3-219ENST00000509409 NBPF19A0A087WUL8 3843 aa14.66□□□□□ -0.06
TPM3-219ENST00000509409 SHANK1Q9Y566 2161 aa14.66□□□□□ -0.06
TPM3-219ENST00000509409 SNRNP200O75643 2136 aaKnown RBP14.65□□□□□ -0.06
TPM3-219ENST00000509409 NSG1A0A0A6YYJ2 146 aa14.65□□□□□ -0.06
TPM3-219ENST00000509409 SMAPO00193 183 aa14.65□□□□□ -0.06
TPM3-219ENST00000509409 FFAR3O14843 346 aa14.65□□□□□ -0.06
TPM3-219ENST00000509409 GPR42O15529 346 aa14.65□□□□□ -0.06
TPM3-219ENST00000509409 ERGP11308 486 aa14.65□□□□□ -0.06
TPM3-219ENST00000509409 COILP38432 576 aaPredicted RBP14.65□□□□□ -0.06
TPM3-219ENST00000509409 EMP3P54852 163 aa14.65□□□□□ -0.06
TPM3-219ENST00000509409 Q0VFX4 171 aa14.65□□□□□ -0.06
TPM3-219ENST00000509409 ZNF169Q14929 603 aaPredicted RBP14.65□□□□□ -0.06
TPM3-219ENST00000509409 HKDC1Q2TB90 917 aa14.65□□□□□ -0.06
TPM3-219ENST00000509409 FAAH2Q6GMR7 532 aa14.65□□□□□ -0.06
TPM3-219ENST00000509409 TTC27Q6P3X3 843 aa14.65□□□□□ -0.06
TPM3-219ENST00000509409 IGFL2Q6UWQ7 119 aa14.65□□□□□ -0.06
TPM3-219ENST00000509409 NEK10Q6ZWH5 1172 aa14.65□□□□□ -0.06
TPM3-219ENST00000509409 NDUFAF7Q7L592 441 aa14.65□□□□□ -0.06
TPM3-219ENST00000509409 KBTBD2Q8IY47 623 aa14.65□□□□□ -0.06
TPM3-219ENST00000509409 MCUQ8NE86 351 aa14.65□□□□□ -0.06
TPM3-219ENST00000509409 LMF1Q96S06 567 aa14.65□□□□□ -0.06
TPM3-219ENST00000509409 MESP1Q9BRJ9 268 aa14.65□□□□□ -0.06
TPM3-219ENST00000509409 KLHL42Q9P2K6 505 aa14.65□□□□□ -0.06
TPM3-219ENST00000509409 PCYOX1Q9UHG3 505 aa14.65□□□□□ -0.06
TPM3-219ENST00000509409 NTNG1Q9Y2I2 539 aa14.65□□□□□ -0.06
TPM3-219ENST00000509409 UTP20O75691 2785 aaKnown RBP14.64□□□□□ -0.07
TPM3-219ENST00000509409 E7ENX8 843 aa14.64□□□□□ -0.07
TPM3-219ENST00000509409 TXNDC9O14530 226 aa14.64□□□□□ -0.07
TPM3-219ENST00000509409 KIF5CO60282 957 aa14.64□□□□□ -0.07
TPM3-219ENST00000509409 SLC16A8O95907 504 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms