RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 CAB39LQ9H9S4 337 aa16.24■□□□□ 0.19
CLDND1-219ENST00000508659 DMGDHQ9UI17 866 aaKnown RBP16.24■□□□□ 0.19
CLDND1-219ENST00000508659 MGAQ8IWI9 3026 aa16.23■□□□□ 0.19
CLDND1-219ENST00000508659 IGKV1-8A0A0C4DH67 115 aa16.23■□□□□ 0.19
CLDND1-219ENST00000508659 A0A1B0GX78 115 aa16.23■□□□□ 0.19
CLDND1-219ENST00000508659 SRPX2O60687 465 aaPredicted RBP16.23■□□□□ 0.19
CLDND1-219ENST00000508659 C1QAP02745 245 aa16.23■□□□□ 0.19
CLDND1-219ENST00000508659 EIF2S1P05198 315 aaKnown RBP16.23■□□□□ 0.19
CLDND1-219ENST00000508659 STMN1P16949 149 aa16.23■□□□□ 0.19
CLDND1-219ENST00000508659 SPRP35270 261 aaPredicted RBP16.23■□□□□ 0.19
CLDND1-219ENST00000508659 DCDP81605 110 aaKnown RBP16.23■□□□□ 0.19
CLDND1-219ENST00000508659 COL9A2Q14055 689 aaPredicted RBP16.23■□□□□ 0.19
CLDND1-219ENST00000508659 LY6DQ14210 128 aa16.23■□□□□ 0.19
CLDND1-219ENST00000508659 USP10Q14694 798 aaKnown RBP16.23■□□□□ 0.19
CLDND1-219ENST00000508659 SLC9A5Q14940 896 aa16.23■□□□□ 0.19
CLDND1-219ENST00000508659 EFTUD2Q15029 972 aaKnown RBP eCLIP16.23■□□□□ 0.192e-11■■■□□ 16.6
CLDND1-219ENST00000508659 DEFB109BQ30KR1 87 aa16.23■□□□□ 0.19
CLDND1-219ENST00000508659 ZNF385CQ66K41 422 aaPredicted RBP16.23■□□□□ 0.19
CLDND1-219ENST00000508659 FRMPD2BQ6IN97 320 aa16.23■□□□□ 0.19
CLDND1-219ENST00000508659 LCN10Q6JVE6 187 aa16.23■□□□□ 0.19
CLDND1-219ENST00000508659 CAPN13Q6MZZ7 669 aaPredicted RBP16.23■□□□□ 0.19
CLDND1-219ENST00000508659 TMEM207Q6UWW9 146 aa16.23■□□□□ 0.19
CLDND1-219ENST00000508659 TTLL10Q6ZVT0 673 aa16.23■□□□□ 0.19
CLDND1-219ENST00000508659 FRA10AC1Q70Z53 315 aa16.23■□□□□ 0.19
CLDND1-219ENST00000508659 ADAMTSL2Q86TH1 951 aa16.23■□□□□ 0.19
CLDND1-219ENST00000508659 PAQR7Q86WK9 346 aa16.23■□□□□ 0.19
CLDND1-219ENST00000508659 CEP97Q8IW35 865 aa16.23■□□□□ 0.19
CLDND1-219ENST00000508659 ATL1Q8WXF7 558 aa16.23■□□□□ 0.19
CLDND1-219ENST00000508659 IFT81Q8WYA0 676 aa16.23■□□□□ 0.19
CLDND1-219ENST00000508659 ALKBH8Q96BT7 664 aaKnown RBP16.23■□□□□ 0.19
CLDND1-219ENST00000508659 PDLIM5Q96HC4 596 aaKnown RBP16.23■□□□□ 0.19
CLDND1-219ENST00000508659 DHRS4Q9BTZ2 278 aa16.23■□□□□ 0.19
CLDND1-219ENST00000508659 ATG10Q9H0Y0 220 aa16.23■□□□□ 0.19
CLDND1-219ENST00000508659 CUTCQ9NTM9 273 aa16.23■□□□□ 0.19
CLDND1-219ENST00000508659 IFT80Q9P2H3 777 aaPredicted RBP16.23■□□□□ 0.19
CLDND1-219ENST00000508659 NDOR1Q9UHB4 597 aa16.23■□□□□ 0.19
CLDND1-219ENST00000508659 GPN3Q9UHW5 284 aaPredicted RBP16.23■□□□□ 0.19
CLDND1-219ENST00000508659 POLHQ9Y253 713 aa16.23■□□□□ 0.19
CLDND1-219ENST00000508659 FARSAQ9Y285 508 aaKnown RBP16.23■□□□□ 0.19
CLDND1-219ENST00000508659 MTO1Q9Y2Z2 717 aaKnown RBP16.23■□□□□ 0.19
CLDND1-219ENST00000508659 IGSF10Q6WRI0 2623 aa16.23■□□□□ 0.19
CLDND1-219ENST00000508659 GUCA1CO95843 209 aa16.22■□□□□ 0.19
CLDND1-219ENST00000508659 FAM87AP0C7U9 286 aa16.22■□□□□ 0.19
CLDND1-219ENST00000508659 ALAS2P22557 587 aa16.22■□□□□ 0.19
CLDND1-219ENST00000508659 CCR10P46092 362 aa16.22■□□□□ 0.19
CLDND1-219ENST00000508659 NAE1Q13564 534 aa16.22■□□□□ 0.19
CLDND1-219ENST00000508659 IL10RAQ13651 578 aa16.22■□□□□ 0.19
CLDND1-219ENST00000508659 LINC00303Q3SY05 128 aa16.22■□□□□ 0.19
CLDND1-219ENST00000508659 NKAIN1Q4KMZ8 207 aa16.22■□□□□ 0.19
CLDND1-219ENST00000508659 GRTP1Q5TC63 336 aa16.22■□□□□ 0.19
CLDND1-219ENST00000508659 ZNF425Q6IV72 752 aa16.22■□□□□ 0.19
CLDND1-219ENST00000508659 SBSNQ6UWP8 590 aa16.22■□□□□ 0.19
CLDND1-219ENST00000508659 C17orf64Q86WR6 236 aa16.22■□□□□ 0.19
CLDND1-219ENST00000508659 ANKRD7Q92527 254 aa16.22■□□□□ 0.19
CLDND1-219ENST00000508659 RERGQ96A58 199 aaPredicted RBP16.22■□□□□ 0.19
CLDND1-219ENST00000508659 ZNF285Q96NJ3 590 aa16.22■□□□□ 0.19
CLDND1-219ENST00000508659 STARD5Q9NSY2 213 aa16.22■□□□□ 0.19
CLDND1-219ENST00000508659 CUEDC1Q9NWM3 386 aaPredicted RBP16.22■□□□□ 0.19
CLDND1-219ENST00000508659 IKZF3Q9UKT9 509 aa16.22■□□□□ 0.19
CLDND1-219ENST00000508659 TCFL5Q9UL49 500 aa16.22■□□□□ 0.19
CLDND1-219ENST00000508659 NOVA2Q9UNW9 492 aaKnown RBP16.22■□□□□ 0.19
CLDND1-219ENST00000508659 FITM1A5D6W6 292 aa16.21■□□□□ 0.19
CLDND1-219ENST00000508659 CDC7O00311 574 aa16.21■□□□□ 0.19
CLDND1-219ENST00000508659 HAT1O14929 419 aa16.21■□□□□ 0.19
CLDND1-219ENST00000508659 DSCR3O14972 297 aa16.21■□□□□ 0.19
CLDND1-219ENST00000508659 PHGDHO43175 533 aaKnown RBP16.21■□□□□ 0.19
CLDND1-219ENST00000508659 RECKO95980 971 aa16.21■□□□□ 0.19
CLDND1-219ENST00000508659 HRH2P25021 359 aa16.21■□□□□ 0.19
CLDND1-219ENST00000508659 GCGRP47871 477 aa16.21■□□□□ 0.19
CLDND1-219ENST00000508659 POLE2P56282 527 aa16.21■□□□□ 0.19
CLDND1-219ENST00000508659 PPP1R3AQ16821 1122 aa16.21■□□□□ 0.19
CLDND1-219ENST00000508659 UGT8Q16880 541 aa16.21■□□□□ 0.19
CLDND1-219ENST00000508659 WASHC2DQ5SRD0 308 aa16.21■□□□□ 0.19
CLDND1-219ENST00000508659 CSNK1A1LQ8N752 337 aa16.21■□□□□ 0.19
CLDND1-219ENST00000508659 ANKRD49Q8WVL7 239 aa16.21■□□□□ 0.19
CLDND1-219ENST00000508659 APOBEC4Q8WW27 367 aaKnown RBP16.21■□□□□ 0.19
CLDND1-219ENST00000508659 FBXL8Q96CD0 374 aa16.21■□□□□ 0.19
CLDND1-219ENST00000508659 CABS1Q96KC9 395 aa16.21■□□□□ 0.19
CLDND1-219ENST00000508659 EGFL8Q99944 293 aa16.21■□□□□ 0.19
CLDND1-219ENST00000508659 SGPP1Q9BX95 441 aa16.21■□□□□ 0.19
CLDND1-219ENST00000508659 CDC42EP4Q9H3Q1 356 aaKnown RBP16.21■□□□□ 0.19
CLDND1-219ENST00000508659 ENAMQ9NRM1 1142 aa16.21■□□□□ 0.19
CLDND1-219ENST00000508659 NINJ2Q9NZG7 142 aa16.21■□□□□ 0.19
CLDND1-219ENST00000508659 CTNNAL1Q9UBT7 734 aa16.21■□□□□ 0.19
CLDND1-219ENST00000508659 MAN2B2Q9Y2E5 1009 aa16.21■□□□□ 0.19
CLDND1-219ENST00000508659 CACNA1GO43497 2377 aa16.2■□□□□ 0.18
CLDND1-219ENST00000508659 LOC105369274A0A096LPK9 316 aa16.2■□□□□ 0.18
CLDND1-219ENST00000508659 LOC102723532A0A0G2JNH3 316 aa16.2■□□□□ 0.18
CLDND1-219ENST00000508659 H0YGG7 62 aa16.2■□□□□ 0.18
CLDND1-219ENST00000508659 PRB1P04280 392 aa16.2■□□□□ 0.18
CLDND1-219ENST00000508659 CAPN1P07384 714 aa16.2■□□□□ 0.18
CLDND1-219ENST00000508659 FURINP09958 794 aa16.2■□□□□ 0.18
CLDND1-219ENST00000508659 RAB10P61026 200 aa16.2■□□□□ 0.18
CLDND1-219ENST00000508659 ARF3P61204 181 aaPredicted RBP16.2■□□□□ 0.18
CLDND1-219ENST00000508659 NFKB2Q00653 900 aa16.2■□□□□ 0.18
CLDND1-219ENST00000508659 TSNQ15631 228 aaKnown RBP16.2■□□□□ 0.18
CLDND1-219ENST00000508659 ZKSCAN8Q15776 578 aaPredicted RBP16.2■□□□□ 0.18
CLDND1-219ENST00000508659 FAM214AQ32MH5 1076 aa16.2■□□□□ 0.18
CLDND1-219ENST00000508659 MLIPQ5VWP3 458 aa16.2■□□□□ 0.18
CLDND1-219ENST00000508659 LCTLQ6UWM7 567 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms