RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 GUCA1CO95843 209 aa15.99■□□□□ 0.15
SNCA-209ENST00000506244 ITGB2P05107 769 aa15.99■□□□□ 0.15
SNCA-209ENST00000506244 ABHD2P08910 425 aa15.99■□□□□ 0.15
SNCA-209ENST00000506244 CCDC166P0CW27 439 aa15.99■□□□□ 0.15
SNCA-209ENST00000506244 SLC26A3P40879 764 aa15.99■□□□□ 0.15
SNCA-209ENST00000506244 TSNQ15631 228 aaKnown RBP15.99■□□□□ 0.15
SNCA-209ENST00000506244 TAF1BQ53T94 588 aaPredicted RBP15.99■□□□□ 0.15
SNCA-209ENST00000506244 TEX35Q5T0J7 233 aa15.99■□□□□ 0.15
SNCA-209ENST00000506244 PRAMEF17Q5VTA0 474 aa15.99■□□□□ 0.15
SNCA-209ENST00000506244 ZNF425Q6IV72 752 aa15.99■□□□□ 0.15
SNCA-209ENST00000506244 LCTLQ6UWM7 567 aa15.99■□□□□ 0.15
SNCA-209ENST00000506244 TRMT10CQ7L0Y3 403 aaKnown RBP15.99■□□□□ 0.15
SNCA-209ENST00000506244 PAQR7Q86WK9 346 aa15.99■□□□□ 0.15
SNCA-209ENST00000506244 CNPY4Q8N129 248 aa15.99■□□□□ 0.15
SNCA-209ENST00000506244 ANKRD49Q8WVL7 239 aa15.99■□□□□ 0.15
SNCA-209ENST00000506244 RERGQ96A58 199 aaPredicted RBP15.99■□□□□ 0.15
SNCA-209ENST00000506244 ZNF285Q96NJ3 590 aa15.99■□□□□ 0.15
SNCA-209ENST00000506244 CATSPER2Q96P56 530 aa15.99■□□□□ 0.15
SNCA-209ENST00000506244 EGFL8Q99944 293 aa15.99■□□□□ 0.15
SNCA-209ENST00000506244 SPRTNQ9H040 489 aaPredicted RBP15.99■□□□□ 0.15
SNCA-209ENST00000506244 ATG10Q9H0Y0 220 aa15.99■□□□□ 0.15
SNCA-209ENST00000506244 PADI2Q9Y2J8 665 aa15.99■□□□□ 0.15
SNCA-209ENST00000506244 A0A087X1B8 175 aa15.98■□□□□ 0.15
SNCA-209ENST00000506244 A0A0J9YVX5 310 aa15.98■□□□□ 0.15
SNCA-209ENST00000506244 FITM1A5D6W6 292 aa15.98■□□□□ 0.15
SNCA-209ENST00000506244 TXNDC9O14530 226 aa15.98■□□□□ 0.15
SNCA-209ENST00000506244 TERTO14746 1132 aaKnown RBP15.98■□□□□ 0.15
SNCA-209ENST00000506244 HCRTR1O43613 425 aa15.98■□□□□ 0.15
SNCA-209ENST00000506244 CD63P08962 238 aa15.98■□□□□ 0.15
SNCA-209ENST00000506244 RAB40ALP0C0E4 278 aa15.98■□□□□ 0.15
SNCA-209ENST00000506244 GRK3P35626 688 aa15.98■□□□□ 0.15
SNCA-209ENST00000506244 SERPINB8P50452 374 aa15.98■□□□□ 0.15
SNCA-209ENST00000506244 SERPINB9P50453 376 aa15.98■□□□□ 0.15
SNCA-209ENST00000506244 VSX2P58304 361 aaPredicted RBP15.98■□□□□ 0.15
SNCA-209ENST00000506244 CDC20Q12834 499 aa15.98■□□□□ 0.15
SNCA-209ENST00000506244 ITPR1Q14643 2758 aa15.98■□□□□ 0.15
SNCA-209ENST00000506244 FAM214AQ32MH5 1076 aa15.98■□□□□ 0.15
SNCA-209ENST00000506244 TCAIMQ8N3R3 496 aa15.98■□□□□ 0.15
SNCA-209ENST00000506244 SLC38A9Q8NBW4 561 aa15.98■□□□□ 0.15
SNCA-209ENST00000506244 OR56A3Q8NH54 315 aa15.98■□□□□ 0.15
SNCA-209ENST00000506244 SLC44A1Q8WWI5 657 aa15.98■□□□□ 0.15
SNCA-209ENST00000506244 ALKBH8Q96BT7 664 aaKnown RBP15.98■□□□□ 0.15
SNCA-209ENST00000506244 MRRFQ96E11 262 aaKnown RBP15.98■□□□□ 0.15
SNCA-209ENST00000506244 DHRS4Q9BTZ2 278 aa15.98■□□□□ 0.15
SNCA-209ENST00000506244 TMEM184CQ9NVA4 438 aa15.98■□□□□ 0.15
SNCA-209ENST00000506244 IL17BQ9UHF5 180 aa15.98■□□□□ 0.15
SNCA-209ENST00000506244 PCM1Q15154 2024 aa15.97■□□□□ 0.15
SNCA-209ENST00000506244 IGKV1-8A0A0C4DH67 115 aa15.97■□□□□ 0.15
SNCA-209ENST00000506244 A0A1B0GX78 115 aa15.97■□□□□ 0.15
SNCA-209ENST00000506244 CCDC189A1A4V9 331 aa15.97■□□□□ 0.15
SNCA-209ENST00000506244 KATNA1O75449 491 aa15.97■□□□□ 0.15
SNCA-209ENST00000506244 RECKO95980 971 aa15.97■□□□□ 0.15
SNCA-209ENST00000506244 S100BP04271 92 aaPredicted RBP15.97■□□□□ 0.15
SNCA-209ENST00000506244 SLC35E2BP0CK96 405 aa15.97■□□□□ 0.15
SNCA-209ENST00000506244 WT1P19544 449 aaPredicted RBP15.97■□□□□ 0.15
SNCA-209ENST00000506244 CNTFP26441 200 aa15.97■□□□□ 0.15
SNCA-209ENST00000506244 PTPN4P29074 926 aa15.97■□□□□ 0.15
SNCA-209ENST00000506244 RPS15AP62244 130 aaKnown RBP15.97■□□□□ 0.15
SNCA-209ENST00000506244 DCDP81605 110 aaKnown RBP15.97■□□□□ 0.15
SNCA-209ENST00000506244 CSHL1Q14406 222 aa15.97■□□□□ 0.15
SNCA-209ENST00000506244 PTCHD3Q3KNS1 767 aa15.97■□□□□ 0.15
SNCA-209ENST00000506244 CDKL4Q5MAI5 379 aa15.97■□□□□ 0.15
SNCA-209ENST00000506244 MROH9Q5TGP6 573 aa15.97■□□□□ 0.15
SNCA-209ENST00000506244 FAM198BQ6UWH4 519 aa15.97■□□□□ 0.15
SNCA-209ENST00000506244 CMC1Q7Z7K0 106 aa15.97■□□□□ 0.15
SNCA-209ENST00000506244 SYVN1Q86TM6 617 aa15.97■□□□□ 0.15
SNCA-209ENST00000506244 TBC1D19Q8N5T2 526 aa15.97■□□□□ 0.15
SNCA-209ENST00000506244 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.97■□□□□ 0.15
SNCA-209ENST00000506244 UBXN10Q96LJ8 280 aa15.97■□□□□ 0.15
SNCA-209ENST00000506244 GBP5Q96PP8 586 aa15.97■□□□□ 0.15
SNCA-209ENST00000506244 PAFAH2Q99487 392 aa15.97■□□□□ 0.15
SNCA-209ENST00000506244 NLNQ9BYT8 704 aa15.97■□□□□ 0.15
SNCA-209ENST00000506244 CHST8Q9H2A9 424 aa15.97■□□□□ 0.15
SNCA-209ENST00000506244 ACTL8Q9H568 366 aa15.97■□□□□ 0.15
SNCA-209ENST00000506244 CNOT10Q9H9A5 744 aaKnown RBP15.97■□□□□ 0.15
SNCA-209ENST00000506244 NMRAL1Q9HBL8 299 aa15.97■□□□□ 0.15
SNCA-209ENST00000506244 CUTCQ9NTM9 273 aa15.97■□□□□ 0.15
SNCA-209ENST00000506244 CUEDC1Q9NWM3 386 aaPredicted RBP15.97■□□□□ 0.15
SNCA-209ENST00000506244 GPN3Q9UHW5 284 aaPredicted RBP15.97■□□□□ 0.15
SNCA-209ENST00000506244 TLK1Q9UKI8 766 aa15.97■□□□□ 0.15
SNCA-209ENST00000506244 IKZF3Q9UKT9 509 aa15.97■□□□□ 0.15
SNCA-209ENST00000506244 EXOC1LA0A1B0GW35 172 aa15.96■□□□□ 0.15
SNCA-209ENST00000506244 ESPNB1AK53 854 aa15.96■□□□□ 0.15
SNCA-209ENST00000506244 DSCR3O14972 297 aa15.96■□□□□ 0.15
SNCA-209ENST00000506244 CREG1O75629 220 aa15.96■□□□□ 0.15
SNCA-209ENST00000506244 KRT38O76015 456 aa15.96■□□□□ 0.15
SNCA-209ENST00000506244 IPO13O94829 963 aaKnown RBP15.96■□□□□ 0.15
SNCA-209ENST00000506244 LTA4HP09960 611 aaKnown RBP15.96■□□□□ 0.15
SNCA-209ENST00000506244 SPTBP11277 2137 aa15.96■□□□□ 0.15
SNCA-209ENST00000506244 PIM1P11309 404 aaPredicted RBP15.96■□□□□ 0.15
SNCA-209ENST00000506244 CD1DP15813 335 aa15.96■□□□□ 0.15
SNCA-209ENST00000506244 TNFRSF8P28908 595 aa15.96■□□□□ 0.15
SNCA-209ENST00000506244 MSH2P43246 934 aa15.96■□□□□ 0.15
SNCA-209ENST00000506244 PMS2P54278 862 aa15.96■□□□□ 0.15
SNCA-209ENST00000506244 EMP3P54852 163 aa15.96■□□□□ 0.15
SNCA-209ENST00000506244 BMPR2Q13873 1038 aa15.96■□□□□ 0.15
SNCA-209ENST00000506244 NCF4Q15080 339 aa15.96■□□□□ 0.15
SNCA-209ENST00000506244 TGFBIQ15582 683 aa15.96■□□□□ 0.15
SNCA-209ENST00000506244 FAM83EQ2M2I3 478 aa15.96■□□□□ 0.15
SNCA-209ENST00000506244 MUM1Q2TAK8 710 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms