RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 TOP3BO95985 862 aaKnown RBP3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 PLAUP00749 431 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 IGHV2-70P01814 119 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 SFTPBP07988 381 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 FGF4P08620 206 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 NUDT17P0C025 328 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 POLR2MP0CAP2 368 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 ZCCHC18P0CG32 403 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 STAG3L3P0CL85 134 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 KRT3P12035 628 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 COMTP21964 271 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 JAK1P23458 1154 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 PCSK6P29122 969 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 HOXA7P31268 230 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 ARRB2P32121 409 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 TNFSF8P32971 234 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 CD151P48509 253 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 HOXA4Q00056 320 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 SPAG1Q07617 926 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 IL10RBQ08334 325 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 FAM27E3Q08E93 113 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 MYBPHQ13203 477 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 DNAJC3Q13217 504 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 PDIA5Q14554 519 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 RBBP7Q16576 425 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 ZNF385BQ569K4 471 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 DCAF6Q58WW2 860 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 MIIPQ5JXC2 388 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 RABGAP1LQ5R372 815 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 FAM69BQ5VUD6 431 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 AGAP6Q5VW22 663 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 IL23RQ5VWK5 629 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 C11orf63Q6NUN7 778 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 KCTD18Q6PI47 426 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 CLEC2AQ6UVW9 174 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 HTR3DQ70Z44 454 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 SHFQ7M4L6 423 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 PEG10Q86TG7 708 aaKnown RBP3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 FAM228AQ86W67 206 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 SPATA2LQ8IUW3 424 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 GRAMD2AQ8IUY3 354 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 LRRC56Q8IYG6 542 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 BEST3Q8N1M1 668 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 ARHGAP24Q8N264 748 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 LRRC17Q8N6Y2 441 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 ZNF321PQ8N8H1 164 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 DRAXINQ8NBI3 349 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 OR8J1Q8NGP2 316 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 PNPT1Q8TCS8 783 aaKnown RBP3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 GIPC3Q8TF64 312 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 RLN3Q8WXF3 142 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 PEX13Q92968 403 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 RHBDF1Q96CC6 855 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 OXNAD1Q96HP4 312 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 SENP8Q96LD8 212 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 FCRL4Q96PJ5 515 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 GFI1Q99684 422 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 GPA33Q99795 319 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 ALG12Q9BV10 488 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 FTHL17Q9BXU8 183 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 GSDMCQ9BYG8 508 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 MEGF9Q9H1U4 602 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 ESRP2Q9H6T0 727 aaKnown RBP3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 PNRC2Q9NPJ4 139 aaKnown RBP3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 CNGB3Q9NQW8 809 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 GPR173Q9NS66 373 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 GDAP2Q9NXN4 497 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 FAM53CQ9NYF3 392 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 UTP6Q9NYH9 597 aaKnown RBP3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 NPAP1Q9NZP6 1156 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 FBXL2Q9UKC9 423 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 KIAA1257Q9ULG3 409 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 PCDHA12Q9UN75 941 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 MRPS33Q9Y291 106 aaKnown RBP3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 NCKAP1Q9Y2A7 1128 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 STK38LQ9Y2H1 464 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 PAM16Q9Y3D7 125 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 TMED3Q9Y3Q3 217 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 CHTOPQ9Y3Y2 248 aaKnown RBP3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 AP4B1Q9Y6B7 739 aa3.47□□□□□ -1.85
HMGB1P22-201ENST00000505315 A0A0U1RQV5 110 aa3.46□□□□□ -1.86
HMGB1P22-201ENST00000505315 FEZF1A0PJY2 475 aa3.46□□□□□ -1.86
HMGB1P22-201ENST00000505315 TMEM221A6NGB7 291 aa3.46□□□□□ -1.86
HMGB1P22-201ENST00000505315 ZNF716A6NP11 495 aa3.46□□□□□ -1.86
HMGB1P22-201ENST00000505315 HNRNPCL2B2RXH8 293 aa3.46□□□□□ -1.86
HMGB1P22-201ENST00000505315 E9PI62 339 aa3.46□□□□□ -1.86
HMGB1P22-201ENST00000505315 GOLGA8SH3BPF8 625 aa3.46□□□□□ -1.86
HMGB1P22-201ENST00000505315 SMIM22K7EJ46 135 aa3.46□□□□□ -1.86
HMGB1P22-201ENST00000505315 CASC3O15234 703 aaKnown RBP3.46□□□□□ -1.86
HMGB1P22-201ENST00000505315 SMAD6O43541 496 aaKnown RBP3.46□□□□□ -1.86
HMGB1P22-201ENST00000505315 RHBDL1O75783 438 aa3.46□□□□□ -1.86
HMGB1P22-201ENST00000505315 CSF2P04141 144 aa3.46□□□□□ -1.86
HMGB1P22-201ENST00000505315 ZNF735P0CB33 412 aa3.46□□□□□ -1.86
HMGB1P22-201ENST00000505315 DLATP10515 647 aaKnown RBP3.46□□□□□ -1.86
HMGB1P22-201ENST00000505315 CETPP11597 493 aa3.46□□□□□ -1.86
HMGB1P22-201ENST00000505315 IRF2P14316 349 aa3.46□□□□□ -1.86
HMGB1P22-201ENST00000505315 B4GALT1P15291 398 aa3.46□□□□□ -1.86
HMGB1P22-201ENST00000505315 EPCAMP16422 314 aa3.46□□□□□ -1.86
HMGB1P22-201ENST00000505315 ITGB6P18564 788 aa3.46□□□□□ -1.86
HMGB1P22-201ENST00000505315 MAOAP21397 527 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms